FFCP PHASE1:Hg19::chr3:141205827..141205845,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:141205827..141205845,+
|short_description=p2@RASA2
|description=CAGE_peak_2_at_RASA2_5end
|association_with_transcript=-43bp_to_ENST00000515549_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5922 | |EntrezGene=5922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9872 | |HGNC=9872 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBA9 | |UniProt=D6RBA9 | ||
|association_with_transcript=-43bp_to_ENST00000515549_5end | |||
|cluster_id=chr3:141205827..141205845,+ | |||
|description=CAGE_peak_2_at_RASA2_5end | |||
|id=chr3:141205827..141205845,+ | |||
|ontology_enrichment_celltype=CL:0000838!8.88e-08!52;CL:0000542!1.73e-07!53;CL:0000051!1.73e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.43e-08;18!CL:0000789;5.43e-08;18!CL:0002419;5.43e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.98e-08,18;CL:0000789,3.98e-08,18;CL:0002420,3.98e-08,18;CL:0002419,3.98e-08,18;CL:0000790,3.98e-08,18;CL:0000838,4.04e-08,52;CL:0000542,9.97e-08,53;CL:0000051,9.97e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;5.43e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-18!115;UBERON:0001049!6.91e-17!57;UBERON:0005068!6.91e-17!57;UBERON:0006241!6.91e-17!57;UBERON:0007135!6.91e-17!57;UBERON:0002780!2.70e-16!41;UBERON:0001890!2.70e-16!41;UBERON:0006240!2.70e-16!41;UBERON:0001017!3.27e-15!82;UBERON:0003080!3.79e-15!42;UBERON:0000073!8.43e-15!94;UBERON:0001016!8.43e-15!94;UBERON:0001893!1.67e-14!34;UBERON:0000955!1.87e-14!69;UBERON:0006238!1.87e-14!69;UBERON:0002020!2.53e-14!34;UBERON:0003528!2.53e-14!34;UBERON:0005743!3.41e-14!86;UBERON:0002791!6.28e-14!33;UBERON:0001869!9.14e-14!32;UBERON:0002616!1.18e-13!59;UBERON:0002346!6.74e-12!90;UBERON:0002619!2.39e-11!22;UBERON:0000956!6.40e-11!25;UBERON:0000203!6.40e-11!25;UBERON:0003075!7.04e-11!86;UBERON:0007284!7.04e-11!86;UBERON:0001950!2.55e-10!20;UBERON:0003056!4.57e-09!61;UBERON:0000153!4.23e-07!129;UBERON:0007811!4.23e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.96e-13;34!UBERON:0002780;8.82e-13;41!UBERON:0001890;8.82e-13;41!UBERON:0003528;9.05e-13;34!UBERON:0002020;9.05e-13;34!UBERON:0001869;9.58e-13;32!UBERON:0002791;1.40e-12;32!UBERON:0002619;1.34e-11;22!UBERON:0000073;6.33e-11;53!UBERON:0002616;6.33e-11;53!UBERON:0000956;7.97e-11;25!UBERON:0000203;7.97e-11;25!UBERON:0001950;2.33e-10;20!UBERON:0000955;2.79e-08;68!UBERON:0001016;1.01e-07;83!UBERON:0001017;1.27e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.70e-20,114;UBERON:0001049,7.98e-20,56;UBERON:0005068,7.98e-20,56;UBERON:0006241,7.98e-20,56;UBERON:0007135,7.98e-20,56;UBERON:0000073,1.98e-19,53;UBERON:0002616,1.98e-19,53;UBERON:0001016,7.96e-19,89;UBERON:0001017,3.75e-18,81;UBERON:0000955,4.28e-18,68;UBERON:0006238,4.28e-18,68;UBERON:0002780,1.81e-17,41;UBERON:0001890,1.81e-17,41;UBERON:0003080,1.81e-17,41;UBERON:0006240,1.81e-17,41;UBERON:0001893,1.86e-15,34;UBERON:0003528,3.01e-15,34;UBERON:0002020,3.01e-15,34;UBERON:0001869,1.45e-14,32;UBERON:0002791,2.94e-14,32;UBERON:0002346,2.93e-13,86;UBERON:0003075,2.06e-12,82;UBERON:0007284,2.06e-12,82;UBERON:0002619,3.75e-12,22;UBERON:0000956,3.73e-11,25;UBERON:0000203,3.73e-11,25;UBERON:0001950,6.39e-11,20;UBERON:0003056,6.99e-11,61;UBERON:0010371,7.43e-07,104 | |||
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| ||
|short_description=p2@RASA2 | |||
}} | }} |
Latest revision as of 03:42, 25 September 2015
Short description: | p2@RASA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000515549_5end |
EntrezGene: | RASA2 |
HGNC: | 9872 |
UniProt: | D6RBA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.98e-08 | 18 |
alpha-beta T cell | 3.98e-08 | 18 |
immature T cell | 3.98e-08 | 18 |
mature T cell | 3.98e-08 | 18 |
immature alpha-beta T cell | 3.98e-08 | 18 |
lymphoid lineage restricted progenitor cell | 4.04e-08 | 52 |
lymphocyte | 9.97e-08 | 53 |
common lymphoid progenitor | 9.97e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.70e-20 | 114 |
neural tube | 7.98e-20 | 56 |
neural rod | 7.98e-20 | 56 |
future spinal cord | 7.98e-20 | 56 |
neural keel | 7.98e-20 | 56 |
regional part of nervous system | 1.98e-19 | 53 |
regional part of brain | 1.98e-19 | 53 |
nervous system | 7.96e-19 | 89 |
central nervous system | 3.75e-18 | 81 |
brain | 4.28e-18 | 68 |
future brain | 4.28e-18 | 68 |
regional part of forebrain | 1.81e-17 | 41 |
forebrain | 1.81e-17 | 41 |
anterior neural tube | 1.81e-17 | 41 |
future forebrain | 1.81e-17 | 41 |
telencephalon | 1.86e-15 | 34 |
brain grey matter | 3.01e-15 | 34 |
gray matter | 3.01e-15 | 34 |
cerebral hemisphere | 1.45e-14 | 32 |
regional part of telencephalon | 2.94e-14 | 32 |
neurectoderm | 2.93e-13 | 86 |
neural plate | 2.06e-12 | 82 |
presumptive neural plate | 2.06e-12 | 82 |
regional part of cerebral cortex | 3.75e-12 | 22 |
cerebral cortex | 3.73e-11 | 25 |
pallium | 3.73e-11 | 25 |
neocortex | 6.39e-11 | 20 |
pre-chordal neural plate | 6.99e-11 | 61 |
ecto-epithelium | 7.43e-07 | 104 |