FFCP PHASE1:Hg19::chr12:85306453..85306460,-: Difference between revisions
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|id=chr12:85306453..85306460,-
|short_description=p6@SLC6A15
|description=CAGE_peak_6_at_SLC6A15_5end
|association_with_transcript=111bp_to_ENST00000450363,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55117 | |EntrezGene=55117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13621 | |HGNC=13621 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H9F5,F8VX16 | |UniProt=Q9H9F5,F8VX16 | ||
|association_with_transcript=111bp_to_ENST00000450363,ENST00000551612_5end | |||
|cluster_id=chr12:85306453..85306460,- | |||
|description=CAGE_peak_6_at_SLC6A15_5end | |||
|id=chr12:85306453..85306460,- | |||
|ontology_enrichment_celltype=CL:0002551!8.27e-07!6;CL:0000333!9.04e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002566;7.47e-30;1!CL:0000147;6.09e-19;14!CL:0000148;2.18e-12;10!CL:0002567;9.43e-11;3!CL:0002577;9.43e-11;3!CL:0002586;9.43e-11;3!CL:0000149;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,7.48e-30,1;CL:0000147,5.39e-19,14;CL:0000148,2.24e-12,10;CL:0000541,2.24e-12,10;CL:0002586,7.42e-11,3;CL:0002577,8.17e-11,3;CL:0002567,9.90e-11,3;CL:0000149,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.43e-11;3 | |||
|ontology_enrichment_disease=DOID:171!1.33e-08!10;DOID:169!5.61e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.91e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.37e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.79e-14!94;UBERON:0001016!6.79e-14!94;UBERON:0000924!5.89e-13!173;UBERON:0006601!5.89e-13!173;UBERON:0004121!1.08e-11!169;UBERON:0001893!2.34e-11!34;UBERON:0005743!3.74e-10!86;UBERON:0002791!4.43e-10!33;UBERON:0000033!5.28e-10!123;UBERON:0002020!9.23e-10!34;UBERON:0003528!9.23e-10!34;UBERON:0001049!1.51e-09!57;UBERON:0005068!1.51e-09!57;UBERON:0006241!1.51e-09!57;UBERON:0007135!1.51e-09!57;UBERON:0000153!3.39e-09!129;UBERON:0007811!3.39e-09!129;UBERON:0001869!3.91e-09!32;UBERON:0002616!4.27e-09!59;UBERON:0000955!6.31e-09!69;UBERON:0006238!6.31e-09!69;UBERON:0002780!7.20e-09!41;UBERON:0001890!7.20e-09!41;UBERON:0006240!7.20e-09!41;UBERON:0002346!1.08e-08!90;UBERON:0001017!1.11e-08!82;UBERON:0003080!1.39e-08!42;UBERON:0000013!2.15e-08!5;UBERON:0002410!2.15e-08!5;UBERON:0002619!3.70e-08!22;UBERON:0003056!6.25e-08!61;UBERON:0003075!1.89e-07!86;UBERON:0007284!1.89e-07!86;UBERON:0001950!2.05e-07!20;UBERON:0000956!5.47e-07!25;UBERON:0000203!5.47e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.61e-23;5!UBERON:0005388;1.61e-23;5!UBERON:0001802;1.61e-23;5!UBERON:0001781;9.43e-11;3!UBERON:0001782;9.43e-11;3!UBERON:0001987;2.18e-08;4!UBERON:0000019;6.38e-07;19!UBERON:0000047;6.38e-07;19!UBERON:0004088;6.38e-07;19!UBERON:0010230;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,6.48e-20,6;UBERON:0005388,6.48e-20,6;UBERON:0001802,6.48e-20,6;UBERON:0001782,7.42e-11,3;UBERON:0005424,7.42e-11,3;UBERON:0001781,1.82e-08,4;UBERON:0001987,1.96e-08,4;UBERON:0004340,1.96e-08,4 | |||
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| ||
|short_description=p6@SLC6A15 | |||
}} | }} |
Latest revision as of 03:33, 25 September 2015
Short description: | p6@SLC6A15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC6A15_5end |
Coexpression cluster: | NA |
Association with transcript: | 111bp_to_ENST00000450363, ENST00000551612_5end |
EntrezGene: | SLC6A15 |
HGNC: | 13621 |
UniProt: | Q9H9F5F8VX16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 7.48e-30 | 1 |
pigment cell | 5.39e-19 | 14 |
melanocyte | 2.24e-12 | 10 |
melanoblast | 2.24e-12 | 10 |
retinal pigment epithelial cell | 7.42e-11 | 3 |
placental epithelial cell | 8.17e-11 | 3 |
light melanocyte | 9.90e-11 | 3 |
visual pigment cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
retina | 6.48e-20 | 6 |
photoreceptor array | 6.48e-20 | 6 |
posterior segment of eyeball | 6.48e-20 | 6 |
pigmented layer of retina | 7.42e-11 | 3 |
presumptive retinal pigmented epithelium | 7.42e-11 | 3 |
layer of retina | 1.82e-08 | 4 |
placenta | 1.96e-08 | 4 |
allantois | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.37e-15 | 2 |