FFCP PHASE1:Hg19::chr8:110535027..110535055,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93035 | |EntrezGene=93035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20313 | |HGNC=20313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534623_5end | |association_with_transcript=0bp_to_ENST00000534623_5end | ||
|cluster_id=chr8:110535027..110535055,+ | |||
|coexpression_cluster_id=C995 | |||
|description=CAGE_peak_2_at_PKHD1L1_5end | |description=CAGE_peak_2_at_PKHD1L1_5end | ||
|id=chr8:110535027..110535055,+ | |id=chr8:110535027..110535055,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.04e-47!24;CL:0000826!6.04e-47!24;CL:0000236!2.77e-26!14;CL:0000542!1.14e-22!53;CL:0000051!1.14e-22!53;CL:0000838!3.47e-21!52;CL:0002087!6.77e-08!119 | |ontology_enrichment_celltype=CL:0000945!6.04e-47!24;CL:0000826!6.04e-47!24;CL:0000236!2.77e-26!14;CL:0000542!1.14e-22!53;CL:0000051!1.14e-22!53;CL:0000838!3.47e-21!52;CL:0002087!6.77e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.60e-103;24!CL:0000236;1.95e-56;13!CL:0000542;1.19e-29;53!CL:0002087;3.09e-08;104!CL:0000946;6.06e-07;1!CL:0000786;6.06e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.34e-103,24;CL:0000826,5.34e-103,24;CL:0000236,1.06e-61,14;CL:0000542,2.44e-48,53;CL:0000051,2.44e-48,53;CL:0000838,7.33e-45,52;CL:0002087,3.94e-21,115;CL:0002031,4.03e-18,120;CL:0000738,4.55e-17,136;CL:0002032,1.31e-13,161;CL:0000837,1.31e-13,161;CL:0000037,7.94e-13,168;CL:0000785,6.40e-12,2;CL:0000955,6.40e-12,2;CL:0000818,6.40e-12,2;CL:0000954,6.40e-12,2;CL:0000816,6.40e-12,2;CL:0000988,6.55e-12,177;CL:0000817,3.19e-08,3;CL:0000946,6.23e-07,1;CL:0000786,6.23e-07,1;CL:0000980,6.23e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.19e-29;53!CL:0000954;6.40e-12;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.80e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.64e-18;10!DOID:630;6.96e-07;1!DOID:0050177;6.96e-07;1!DOID:0050427;6.96e-07;1!DOID:12603;7.35e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.64e-18,10;DOID:630,6.96e-07,1;DOID:0050177,6.96e-07,1;DOID:0050427,6.96e-07,1;DOID:12603,7.35e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.29e-18!115;UBERON:0004177!4.62e-10!7;UBERON:0000178!1.43e-07!15;UBERON:0000179!1.43e-07!15;UBERON:0000463!1.43e-07!15;UBERON:0002106!2.52e-07!3;UBERON:0004854!2.52e-07!3;UBERON:0009034!2.52e-07!3;UBERON:0002095!2.52e-07!3;UBERON:0004782!2.52e-07!3;UBERON:0003281!2.52e-07!3;UBERON:0009664!2.52e-07!3;UBERON:0002296!2.52e-07!3;UBERON:0005602!2.52e-07!3;UBERON:0001179!2.52e-07!3;UBERON:0006293!2.52e-07!3;UBERON:0003408!8.69e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.19e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.48e-08,3;UBERON:0004854,8.48e-08,3;UBERON:0009034,8.48e-08,3;UBERON:0002095,8.48e-08,3;UBERON:0004782,8.48e-08,3;UBERON:0003281,8.48e-08,3;UBERON:0009664,8.48e-08,3;UBERON:0002296,8.48e-08,3;UBERON:0005602,8.48e-08,3;UBERON:0001179,8.48e-08,3;UBERON:0006293,8.48e-08,3 | |||
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| ||
|short_description=p2@PKHD1L1 | |short_description=p2@PKHD1L1 | ||
}} | }} |
Latest revision as of 03:33, 25 September 2015
Short description: | p2@PKHD1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKHD1L1_5end |
Coexpression cluster: | C995_B_plasma_lymphoma_xeroderma_acute_Burkitt_b |
Association with transcript: | 0bp_to_ENST00000534623_5end |
EntrezGene: | PKHD1L1 |
HGNC: | 20313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.34e-103 | 24 |
pro-B cell | 5.34e-103 | 24 |
B cell | 1.06e-61 | 14 |
lymphocyte | 2.44e-48 | 53 |
common lymphoid progenitor | 2.44e-48 | 53 |
lymphoid lineage restricted progenitor cell | 7.33e-45 | 52 |
nongranular leukocyte | 3.94e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 4.03e-18 | 120 |
leukocyte | 4.55e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.31e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-13 | 161 |
hematopoietic stem cell | 7.94e-13 | 168 |
mature B cell | 6.40e-12 | 2 |
pre-B-II cell | 6.40e-12 | 2 |
transitional stage B cell | 6.40e-12 | 2 |
small pre-B-II cell | 6.40e-12 | 2 |
immature B cell | 6.40e-12 | 2 |
hematopoietic cell | 6.55e-12 | 177 |
precursor B cell | 3.19e-08 | 3 |
antibody secreting cell | 6.23e-07 | 1 |
plasma cell | 6.23e-07 | 1 |
plasmablast | 6.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.48e-08 | 3 |
gastrointestinal system mesentery | 8.48e-08 | 3 |
stomach region | 8.48e-08 | 3 |
mesentery | 8.48e-08 | 3 |
gastrointestinal system serosa | 8.48e-08 | 3 |
mesentery of stomach | 8.48e-08 | 3 |
gut mesentery | 8.48e-08 | 3 |
dorsal mesentery | 8.48e-08 | 3 |
dorsal mesogastrium | 8.48e-08 | 3 |
peritoneal cavity | 8.48e-08 | 3 |
spleen primordium | 8.48e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.64e-18 | 10 |
genetic disease | 6.96e-07 | 1 |
monogenic disease | 6.96e-07 | 1 |
xeroderma pigmentosum | 6.96e-07 | 1 |
acute leukemia | 7.35e-07 | 1 |