FFCP PHASE1:Hg19::chr5:140346050..140346095,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:140346050..140346095,+
|short_description=p1@PCDHAC2
|description=CAGE_peak_1_at_PCDHAC2_5end
|association_with_transcript=-16bp_to_uc003lii.2_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56134 | |EntrezGene=56134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8677 | |HGNC=8677 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_uc003lii.2_5end | |||
|cluster_id=chr5:140346050..140346095,+ | |||
|description=CAGE_peak_1_at_PCDHAC2_5end | |||
|id=chr5:140346050..140346095,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.34e-07;5!CL:0002321;7.43e-07;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.39e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;4.96e-08;6!DOID:171;3.67e-07;10!DOID:3095;8.81e-07;22!DOID:2994;8.81e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.18e-08,6;DOID:171,4.56e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.67e-42!94;UBERON:0001016!8.67e-42!94;UBERON:0005743!8.32e-39!86;UBERON:0001017!1.37e-36!82;UBERON:0001049!7.78e-32!57;UBERON:0005068!7.78e-32!57;UBERON:0006241!7.78e-32!57;UBERON:0007135!7.78e-32!57;UBERON:0002346!6.91e-31!90;UBERON:0003075!1.34e-29!86;UBERON:0007284!1.34e-29!86;UBERON:0000955!1.47e-29!69;UBERON:0006238!1.47e-29!69;UBERON:0002780!2.32e-28!41;UBERON:0001890!2.32e-28!41;UBERON:0006240!2.32e-28!41;UBERON:0002616!4.04e-28!59;UBERON:0003080!3.39e-27!42;UBERON:0007023!5.98e-27!115;UBERON:0000924!7.07e-24!173;UBERON:0006601!7.07e-24!173;UBERON:0003056!1.24e-23!61;UBERON:0001893!1.79e-23!34;UBERON:0002020!2.82e-23!34;UBERON:0003528!2.82e-23!34;UBERON:0001869!8.24e-23!32;UBERON:0004121!1.17e-22!169;UBERON:0002791!1.25e-22!33;UBERON:0002619!2.31e-19!22;UBERON:0000956!8.18e-18!25;UBERON:0000203!8.18e-18!25;UBERON:0001950!8.47e-18!20;UBERON:0000153!8.11e-17!129;UBERON:0007811!8.11e-17!129;UBERON:0000033!8.57e-17!123;UBERON:0000922!4.89e-11!612;UBERON:0000025!7.78e-11!194;UBERON:0000483!5.38e-10!309;UBERON:0000468!1.13e-09!659;UBERON:0000119!1.62e-09!312;UBERON:0000481!4.21e-09!347;UBERON:0000477!7.93e-09!286;UBERON:0002050!9.35e-09!605;UBERON:0005423!9.35e-09!605;UBERON:0000475!9.69e-09!365;UBERON:0000923!1.50e-08!604;UBERON:0005291!1.50e-08!604;UBERON:0006598!1.50e-08!604;UBERON:0002532!1.50e-08!604;UBERON:0000064!4.38e-08!219;UBERON:0001048!9.97e-08!168;UBERON:0004111!1.39e-07!241;UBERON:0001871!1.52e-07!7;UBERON:0002420!2.04e-07!9;UBERON:0007245!2.04e-07!9;UBERON:0010009!2.04e-07!9;UBERON:0010011!2.04e-07!9;UBERON:0000454!2.04e-07!9;UBERON:0002308!6.59e-07!9;UBERON:0000125!6.59e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.27e-29;22!UBERON:0001869;2.74e-29;32!UBERON:0002780;1.44e-28;41!UBERON:0001890;1.44e-28;41!UBERON:0001893;6.19e-28;34!UBERON:0003528;1.19e-27;34!UBERON:0002020;1.19e-27;34!UBERON:0002791;3.32e-27;32!UBERON:0001950;5.89e-27;20!UBERON:0000956;6.57e-25;25!UBERON:0000203;6.57e-25;25!UBERON:0000073;9.86e-25;53!UBERON:0002616;9.86e-25;53!UBERON:0001017;1.80e-19;75!UBERON:0001016;3.57e-19;83!UBERON:0000955;7.92e-19;68!UBERON:0001871;9.09e-10;6!UBERON:0000200;4.40e-09;6!UBERON:0002420;4.79e-09;9!UBERON:0007245;4.79e-09;9!UBERON:0010009;4.79e-09;9!UBERON:0010011;4.79e-09;9!UBERON:0000454;4.79e-09;9!UBERON:0001894;6.91e-09;7!UBERON:0007023;1.52e-08;114!UBERON:0000125;2.48e-08;9!UBERON:0002308;2.48e-08;9!UBERON:0000349;7.83e-08;5!UBERON:0001872;9.43e-08;5!UBERON:0002021;1.38e-07;5!UBERON:0000013;5.34e-07;5!UBERON:0002410;5.34e-07;5!UBERON:0011216;9.07e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.27e-55,89;UBERON:0001017,1.28e-49,81;UBERON:0001049,1.14e-46,56;UBERON:0005068,1.14e-46,56;UBERON:0006241,1.14e-46,56;UBERON:0007135,1.14e-46,56;UBERON:0000073,4.18e-44,53;UBERON:0002616,4.18e-44,53;UBERON:0000955,1.92e-41,68;UBERON:0006238,1.92e-41,68;UBERON:0002780,1.60e-39,41;UBERON:0001890,1.60e-39,41;UBERON:0003080,1.60e-39,41;UBERON:0006240,1.60e-39,41;UBERON:0002346,1.92e-35,86;UBERON:0003075,2.14e-35,82;UBERON:0007284,2.14e-35,82;UBERON:0001869,1.74e-32,32;UBERON:0001893,5.65e-32,34;UBERON:0003528,1.10e-31,34;UBERON:0002020,1.10e-31,34;UBERON:0002791,6.94e-30,32;UBERON:0002619,3.43e-29,22;UBERON:0003056,4.11e-29,61;UBERON:0010371,4.12e-28,104;UBERON:0004121,7.53e-28,171;UBERON:0000924,7.53e-28,171;UBERON:0006601,7.53e-28,171;UBERON:0001950,9.33e-27,20;UBERON:0011216,3.51e-26,223;UBERON:0000956,9.35e-25,25;UBERON:0000203,9.35e-25,25;UBERON:0007023,6.06e-24,114;UBERON:0010314,5.17e-19,132;UBERON:0000025,2.22e-11,192;UBERON:0001871,1.12e-09,6;UBERON:0000200,4.51e-09,6;UBERON:0002420,4.60e-09,9;UBERON:0007245,4.60e-09,9;UBERON:0010009,4.60e-09,9;UBERON:0010011,4.60e-09,9;UBERON:0000454,4.60e-09,9;UBERON:0001894,6.62e-09,7;UBERON:0006222,6.62e-09,7;UBERON:0003076,1.02e-08,15;UBERON:0003057,1.02e-08,15;UBERON:0000125,2.38e-08,9;UBERON:0002308,2.38e-08,9;UBERON:0000349,7.42e-08,5;UBERON:0001872,9.82e-08,5;UBERON:0002021,1.58e-07,5;UBERON:0004111,1.89e-07,240;UBERON:0000013,5.10e-07,5;UBERON:0002410,5.10e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0.919421224478927,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.43917392846563,3.1434978119451,0,0.370784442784429,0,0,0,0,0,0,0.993812036833525,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0.625098097988558,0.44905874525234,0.900891843866578,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0.286804595389004,3.53723747775827,1.32529768321485,3.25343040034651,3.52447587052259,3.5324919122588,1.45990943630332,0,0,0,0,0,0.591534000199219,0.842923450390509,1.20505514941741,0.330881918197182,0.435758888184812,0.474541238222193,0.808987848960987,1.37355025587742,0.769494313892781,1.4763109092493,0,2.4694440679884,0,0,0.982827216677626,0.590789906681404,0,0,0.686271241194102,1.09750285408626,0,0,0.370353780634118,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,3.43394464837949,0,0,0,0,0,0.141775097242386,2.32852159027406,1.45316969256981,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,3.01439377059586,1.74306691720059,2.0994328148232,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,4.06551398755941,1.30139853857622,0.773288812777695,2.68026024534958,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0.280660094433074,3.33161788064823,0,0,0,0,0,0,0,0,0,1.40354529212299,2.4861867012692,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,1.28225062558195,1.31205858279882,2.60302715731442,0.824328093181778,0.0915694648183434,0,0,0.650060246036521,0,0.870036464629098,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,1.69160867728801,1.98341898433174,0.768760269460425,0.638063562472921,1.11273558941105,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,2.4055528181378,0,1.08890984861323,1.31801321087491,0,1.68471475667626,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,3.95249063171651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15068535015921,2.46043718681657,2.50273712567863,0,0,0,0,0,0,0,0.439524537815682,0.36408156524854,5.01495229248653,0,0,0,0,10.9356241254293,7.17414023693615,3.67318726575589,0,0.422250816255987,0.19924798825107,0.828851746593443,0,0,0,0,0,2.14825409610731,0,0.295930216910801,0,0,5.81599647657131,7.2359116566244,1.99613798001194,1.30213880542617,0,0,0.910347586283997,0.254253650292766,0,0.689486746482929,2.04123229368278,5.72962483279864,6.20018970069687,3.61789315876224,1.52581736317083,6.63475559587348,4.72876190325676,7.67848890038904,0,1.11538995422883,0.230850775511391,1.48124672601102,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,2.95397290339238,1.46909527343233,0,0,0,0.176915129006678,0.611030144933625,0,0,0,2.02203398942031,0,4.91955336023212,0,0.391329237864179,0.728341138602278,0.394584402849391,1.20990716048664,11.6307649419586,0.63186579628488,1.20258735531594,0.829505531177977,0,0.330991955875499,0.313932918407225,0,0,0.416024019039416,0.347119476670262,0,0,0,2.40780445460263,0,0,0,1.06687918137261,0,3.16373037092745,0,0,10.44628133272,0,1.20238230377301,3.41524791582964,0.39961921916426,3.02589876023623,0.114536596165916,0.343189995723929,1.4405479798815,2.11229310461235,0,1.22313785466253,1.15063130943567,0,0,3.60252173225874,1.36905378891993,0,2.57859264851974,0,0.558564802544508,1.14580212005842,1.43574604915363,0.399358000997982,0.429226048136571,0,0.604651252380536,0,0,0,0,0,2.85439696392771,0,4.77137813885582,7.62739074224823,3.05430982083536,2.06309154895851,2.49264202817511,0,0,13.1219042381333,0,0.551639951094387,0.104909176269996,0.950403028674658,0.35857467866569,1.53532157855556,2.1440859791201,0,0,0.542999601753713,1.72844298240254,0,0,0,0,0,0.439656701034247,0,2.71494208359256,2.11572162788304,3.76391043345525,0,1.17466153824464,0.471612915298998,0.414239055347196,1.48849806543585,0,0,1.91502377331055,0.544017803369474,1.0027595760908,0.306345576763462,0,0,7.08854543973589,9.15196986764724,5.50840095108599,1.72022758707021,1.22021956690538,2.2354705058898,3.04366996859708,0.124980407962107,0.151649117541648,0,1.17632909849086,0,0.434763085832475,0.149254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| ||
|short_description=p1@PCDHAC2 | |||
}} | }} |
Latest revision as of 03:09, 25 September 2015
Short description: | p1@PCDHAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_uc003lii.2_5end |
EntrezGene: | PCDHAC2 |
HGNC: | 8677 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.18e-08 | 6 |
neuroectodermal tumor | 4.56e-07 | 10 |