FFCP PHASE1:Hg19::chr19:1089971..1090004,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5434 | |EntrezGene=5434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9192 | |HGNC=9192 | ||
|TSSclassifier=strong | |||
|UniProt=P19388 | |UniProt=P19388 | ||
|association_with_transcript=-10bp_to_S42643_5end | |association_with_transcript=-10bp_to_S42643_5end | ||
|cluster_id=chr19:1089971..1090004,- | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_4_at_POLR2E_5end | |description=CAGE_peak_4_at_POLR2E_5end | ||
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|ontology_enrichment_celltype=CL:0000557!7.96e-26!71;CL:0002057!1.73e-24!42;CL:0000839!1.17e-22!70;CL:0000860!2.52e-22!45;CL:0002009!1.27e-21!65;CL:0000766!4.29e-20!76;CL:0000763!2.70e-19!112;CL:0000049!2.70e-19!112;CL:0002194!4.69e-19!63;CL:0000576!4.69e-19!63;CL:0000040!4.69e-19!63;CL:0000559!4.69e-19!63;CL:0000738!4.32e-15!140;CL:0002031!3.90e-13!124;CL:0002032!1.90e-12!165;CL:0000837!1.90e-12!165;CL:0000037!2.94e-12!172;CL:0000566!2.94e-12!172;CL:0000453!1.04e-11!5;CL:0000990!4.20e-11!8;CL:0000988!6.44e-11!182;CL:0002393!2.64e-10!9;CL:0002397!2.64e-10!9;CL:0002087!4.38e-10!119;CL:0000451!7.89e-09!10;CL:0002274!2.48e-07!5;CL:0000457!2.48e-07!5;CL:0002191!2.48e-07!5;CL:0000097!2.48e-07!5;CL:0000831!2.48e-07!5;CL:0002028!2.48e-07!5 | |ontology_enrichment_celltype=CL:0000557!7.96e-26!71;CL:0002057!1.73e-24!42;CL:0000839!1.17e-22!70;CL:0000860!2.52e-22!45;CL:0002009!1.27e-21!65;CL:0000766!4.29e-20!76;CL:0000763!2.70e-19!112;CL:0000049!2.70e-19!112;CL:0002194!4.69e-19!63;CL:0000576!4.69e-19!63;CL:0000040!4.69e-19!63;CL:0000559!4.69e-19!63;CL:0000738!4.32e-15!140;CL:0002031!3.90e-13!124;CL:0002032!1.90e-12!165;CL:0000837!1.90e-12!165;CL:0000037!2.94e-12!172;CL:0000566!2.94e-12!172;CL:0000453!1.04e-11!5;CL:0000990!4.20e-11!8;CL:0000988!6.44e-11!182;CL:0002393!2.64e-10!9;CL:0002397!2.64e-10!9;CL:0002087!4.38e-10!119;CL:0000451!7.89e-09!10;CL:0002274!2.48e-07!5;CL:0000457!2.48e-07!5;CL:0002191!2.48e-07!5;CL:0000097!2.48e-07!5;CL:0000831!2.48e-07!5;CL:0002028!2.48e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;5.66e-71;5!CL:0000990;1.47e-39;8!CL:0000451;2.10e-32;10!CL:0001014;2.38e-29;2!CL:0001016;2.38e-29;2!CL:0000097;9.07e-27;5!CL:0000163;3.52e-15;9!CL:0000840;1.85e-10;5 | |ontology_enrichment_celltype_v019=CL:0000453;5.66e-71;5!CL:0000990;1.47e-39;8!CL:0000451;2.10e-32;10!CL:0001014;2.38e-29;2!CL:0001016;2.38e-29;2!CL:0000097;9.07e-27;5!CL:0000163;3.52e-15;9!CL:0000840;1.85e-10;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.66e-71,5;CL:0000990,1.48e-39,8;CL:0000451,2.10e-32,10;CL:0001014,2.56e-29,2;CL:0001016,2.56e-29,2;CL:0000097,9.07e-27,5;CL:0002028,9.07e-27,5;CL:0000763,1.42e-17,108;CL:0000049,1.42e-17,108;CL:0000738,3.02e-16,136;CL:0000557,4.89e-16,67;CL:0000163,3.52e-15,9;CL:0002032,1.55e-13,161;CL:0000837,1.55e-13,161;CL:0000037,6.38e-13,168;CL:0000988,3.36e-12,177;CL:0002031,1.11e-10,120;CL:0000840,1.90e-10,5;CL:0001029,1.90e-10,5;CL:0000839,6.77e-10,66;CL:0000766,4.88e-09,72;CL:0002009,6.88e-08,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.15e-22!102;UBERON:0003061!5.15e-22!102;UBERON:0002371!9.82e-22!80;UBERON:0002193!4.25e-20!112;UBERON:0001474!1.72e-19!86;UBERON:0004765!2.21e-18!101;UBERON:0001434!2.21e-18!101;UBERON:0002405!7.01e-18!115;UBERON:0003081!5.46e-09!216;UBERON:0002204!2.49e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!5.15e-22!102;UBERON:0003061!5.15e-22!102;UBERON:0002371!9.82e-22!80;UBERON:0002193!4.25e-20!112;UBERON:0001474!1.72e-19!86;UBERON:0004765!2.21e-18!101;UBERON:0001434!2.21e-18!101;UBERON:0002405!7.01e-18!115;UBERON:0003081!5.46e-09!216;UBERON:0002204!2.49e-08!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.60e-14,76;UBERON:0001474,5.53e-13,82;UBERON:0004765,9.16e-12,90;UBERON:0002405,2.32e-11,93;UBERON:0002390,9.68e-11,98;UBERON:0003061,9.68e-11,98;UBERON:0001434,1.65e-10,100;UBERON:0002193,1.14e-09,108 | |||
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| ||
|short_description=p4@POLR2E | |short_description=p4@POLR2E | ||
}} | }} |
Latest revision as of 03:06, 25 September 2015
Short description: | p4@POLR2E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POLR2E_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -10bp_to_S42643_5end |
EntrezGene: | POLR2E |
HGNC: | 9192 |
UniProt: | P19388 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.66e-71 | 5 |
conventional dendritic cell | 1.48e-39 | 8 |
dendritic cell | 2.10e-32 | 10 |
CD1a-positive Langerhans cell | 2.56e-29 | 2 |
immature CD1a-positive Langerhans cell | 2.56e-29 | 2 |
mast cell | 9.07e-27 | 5 |
basophil mast progenitor cell | 9.07e-27 | 5 |
myeloid cell | 1.42e-17 | 108 |
common myeloid progenitor | 1.42e-17 | 108 |
leukocyte | 3.02e-16 | 136 |
granulocyte monocyte progenitor cell | 4.89e-16 | 67 |
endocrine cell | 3.52e-15 | 9 |
hematopoietic oligopotent progenitor cell | 1.55e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-13 | 161 |
hematopoietic stem cell | 6.38e-13 | 168 |
hematopoietic cell | 3.36e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.11e-10 | 120 |
immature conventional dendritic cell | 1.90e-10 | 5 |
common dendritic progenitor | 1.90e-10 | 5 |
myeloid lineage restricted progenitor cell | 6.77e-10 | 66 |
myeloid leukocyte | 4.88e-09 | 72 |
macrophage dendritic cell progenitor | 6.88e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.60e-14 | 76 |
bone element | 5.53e-13 | 82 |
skeletal element | 9.16e-12 | 90 |
immune system | 2.32e-11 | 93 |
hematopoietic system | 9.68e-11 | 98 |
blood island | 9.68e-11 | 98 |
skeletal system | 1.65e-10 | 100 |
hemolymphoid system | 1.14e-09 | 108 |