FFCP PHASE1:Hg19::chrX:43832665..43832676,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:43832665..43832676,- to FFCP PHASE1:Hg19::chrX:43832665..43832676,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4693 | |EntrezGene=4693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7678 | |HGNC=7678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000470584_5end | |||
|cluster_id=chrX:43832665..43832676,- | |||
|description=CAGE_peak_5_at_NDP_5end | |||
|id=chrX:43832665..43832676,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;1.88e-10;1!CL:0000501;1.88e-10;1!CL:0000138;7.90e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,1.80e-10,1;CL:0000501,1.80e-10,1;CL:0000058,6.46e-07,6;CL:0000138,6.46e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.60e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.88e-10;1!DOID:4549;1.88e-10;1!DOID:5861;1.88e-10;1!DOID:6496;1.88e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.98e-10,1;DOID:4549,1.98e-10,1;DOID:5861,1.98e-10,1;DOID:6496,1.98e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.25e-38!57;UBERON:0005068!2.25e-38!57;UBERON:0006241!2.25e-38!57;UBERON:0007135!2.25e-38!57;UBERON:0002616!1.65e-36!59;UBERON:0001893!6.41e-36!34;UBERON:0002020!6.50e-36!34;UBERON:0003528!6.50e-36!34;UBERON:0001017!1.04e-35!82;UBERON:0002780!1.51e-35!41;UBERON:0001890!1.51e-35!41;UBERON:0006240!1.51e-35!41;UBERON:0005743!5.38e-35!86;UBERON:0002791!1.27e-34!33;UBERON:0003080!1.82e-34!42;UBERON:0000955!1.85e-34!69;UBERON:0006238!1.85e-34!69;UBERON:0001869!9.95e-33!32;UBERON:0000073!1.29e-31!94;UBERON:0001016!1.29e-31!94;UBERON:0003075!2.52e-26!86;UBERON:0007284!2.52e-26!86;UBERON:0000033!7.00e-26!123;UBERON:0002346!7.20e-26!90;UBERON:0000956!1.26e-25!25;UBERON:0000203!1.26e-25!25;UBERON:0003056!4.59e-25!61;UBERON:0000153!4.81e-25!129;UBERON:0007811!4.81e-25!129;UBERON:0007023!1.19e-23!115;UBERON:0002619!2.21e-21!22;UBERON:0000924!6.63e-20!173;UBERON:0006601!6.63e-20!173;UBERON:0004121!6.92e-20!169;UBERON:0001950!9.05e-19!20;UBERON:0000475!2.93e-12!365;UBERON:0002308!1.08e-11!9;UBERON:0000125!1.08e-11!9;UBERON:0000025!2.66e-10!194;UBERON:0001872!1.24e-09!5;UBERON:0000062!2.97e-09!511;UBERON:0004111!4.77e-09!241;UBERON:0000477!6.23e-09!286;UBERON:0009663!7.66e-09!7;UBERON:0002420!8.89e-09!9;UBERON:0007245!8.89e-09!9;UBERON:0010009!8.89e-09!9;UBERON:0010011!8.89e-09!9;UBERON:0000454!8.89e-09!9;UBERON:0000481!1.87e-08!347;UBERON:0000922!2.14e-08!612;UBERON:0000064!5.21e-08!219;UBERON:0000467!5.41e-08!625;UBERON:0000480!6.18e-08!626;UBERON:0002050!7.98e-08!605;UBERON:0005423!7.98e-08!605;UBERON:0000200!1.33e-07!6;UBERON:0000468!1.44e-07!659;UBERON:0000923!2.37e-07!604;UBERON:0005291!2.37e-07!604;UBERON:0006598!2.37e-07!604;UBERON:0002532!2.37e-07!604;UBERON:0000483!4.11e-07!309;UBERON:0002298!4.29e-07!8;UBERON:0000119!6.73e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.75e-20;53!UBERON:0002616;3.75e-20;53!UBERON:0002791;6.60e-20;32!UBERON:0001893;8.63e-20;34!UBERON:0003528;1.06e-18;34!UBERON:0002020;1.06e-18;34!UBERON:0002780;7.77e-18;41!UBERON:0001890;7.77e-18;41!UBERON:0001869;2.80e-16;32!UBERON:0000956;1.42e-15;25!UBERON:0000203;1.42e-15;25!UBERON:0000955;4.30e-15;68!UBERON:0001950;2.07e-14;20!UBERON:0001016;1.42e-13;83!UBERON:0002619;4.03e-13;22!UBERON:0001017;2.93e-12;75!UBERON:0009663;9.93e-12;7!UBERON:0002022;5.06e-10;1!UBERON:0002336;5.06e-10;1!UBERON:0005795;5.06e-10;1!UBERON:0002038;5.06e-10;1!UBERON:0011215;5.06e-10;1!UBERON:0001018;5.06e-10;1!UBERON:0009661;5.06e-10;1!UBERON:0002950;5.06e-10;1!UBERON:0002473;5.06e-10;1!UBERON:0005340;5.06e-10;1!UBERON:0003544;5.06e-10;1!UBERON:0005970;5.06e-10;1!UBERON:0002316;5.06e-10;1!UBERON:0001020;5.06e-10;1!UBERON:0001891;5.06e-10;1!UBERON:0002437;5.06e-10;1!UBERON:0002420;3.08e-09;9!UBERON:0000125;3.08e-09;9!UBERON:0007245;3.08e-09;9!UBERON:0002308;3.08e-09;9!UBERON:0010009;3.08e-09;9!UBERON:0010011;3.08e-09;9!UBERON:0000454;3.08e-09;9!UBERON:0001872;7.24e-08;5!UBERON:0002037;7.57e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,1.30e-27,34;UBERON:0001017,3.82e-27,81;UBERON:0000955,4.87e-25,68;UBERON:0006238,4.87e-25,68;UBERON:0000073,1.48e-24,53;UBERON:0002616,1.48e-24,53;UBERON:0002791,2.78e-24,32;UBERON:0001016,3.24e-24,89;UBERON:0001049,3.74e-23,56;UBERON:0005068,3.74e-23,56;UBERON:0006241,3.74e-23,56;UBERON:0007135,3.74e-23,56;UBERON:0003528,8.20e-23,34;UBERON:0002020,8.20e-23,34;UBERON:0002780,9.90e-23,41;UBERON:0001890,9.90e-23,41;UBERON:0003080,9.90e-23,41;UBERON:0006240,9.90e-23,41;UBERON:0001869,1.03e-19,32;UBERON:0000956,2.22e-15,25;UBERON:0000203,2.22e-15,25;UBERON:0003075,3.15e-15,82;UBERON:0007284,3.15e-15,82;UBERON:0003056,7.57e-15,61;UBERON:0002346,1.99e-14,86;UBERON:0001950,3.05e-14,20;UBERON:0002619,5.73e-13,22;UBERON:0010371,1.40e-11,104;UBERON:0009663,1.46e-11,7;UBERON:0004121,1.88e-11,171;UBERON:0000924,1.88e-11,171;UBERON:0006601,1.88e-11,171;UBERON:0002022,3.10e-10,1;UBERON:0002336,9.82e-10,1;UBERON:0011215,9.82e-10,1;UBERON:0001018,9.82e-10,1;UBERON:0002473,9.82e-10,1;UBERON:0005340,9.82e-10,1;UBERON:0003544,9.82e-10,1;UBERON:0005970,9.82e-10,1;UBERON:0002316,9.82e-10,1;UBERON:0001020,9.82e-10,1;UBERON:0002437,9.82e-10,1;UBERON:0002038,1.17e-09,1;UBERON:0009661,1.17e-09,1;UBERON:0002950,1.17e-09,1;UBERON:0001891,1.17e-09,1;UBERON:0009616,1.17e-09,1;UBERON:0010286,1.17e-09,1;UBERON:0002420,4.15e-09,9;UBERON:0000125,4.15e-09,9;UBERON:0007245,4.15e-09,9;UBERON:0002308,4.15e-09,9;UBERON:0010009,4.15e-09,9;UBERON:0010011,4.15e-09,9;UBERON:0000454,4.15e-09,9;UBERON:0010314,1.10e-08,132;UBERON:0011216,4.32e-08,223;UBERON:0001872,1.09e-07,5;UBERON:0007023,2.31e-07,114;UBERON:0002037,8.15e-07,6;UBERON:0006215,8.15e-07,6 | |||
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| ||
|short_description=p5@NDP | |||
}} | }} |
Latest revision as of 02:59, 25 September 2015
Short description: | p5@NDP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NDP_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENST00000470584_5end |
EntrezGene: | NDP |
HGNC: | 7678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 1.80e-10 | 1 |
granulosa cell | 1.80e-10 | 1 |
chondroblast | 6.46e-07 | 6 |
chondrocyte | 6.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.98e-10 | 1 |
extraosseous chondrosarcoma | 1.98e-10 | 1 |
myxoid chondrosarcoma | 1.98e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.98e-10 | 1 |