FFCP PHASE1:Hg19::chr4:129207894..129207915,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10424 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16089 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000503588_5end | |||
|cluster_id=chr4:129207894..129207915,- | |||
|description=CAGE_peak_10_at_PGRMC2_5end | |||
|id=chr4:129207894..129207915,- | |||
|ontology_enrichment_celltype=CL:0000136!2.28e-11!15;CL:0002334!1.25e-10!12;CL:0000057!9.17e-08!75;CL:0000055!5.70e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.86e-35;13!CL:0002334;3.47e-19;12!CL:0002579;6.50e-16;3!CL:0002615;2.66e-15;3!CL:0002580;2.79e-15;3!CL:0002617;7.03e-11;2!CL:0002195;8.54e-11;2!CL:0002571;8.54e-11;2!CL:0000214;5.54e-07;3!CL:0002620;9.02e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.43e-30,15;CL:0002334,2.80e-19,12;CL:0002579,7.20e-16,3;CL:0002580,2.10e-15,3;CL:0002615,4.32e-15,3;CL:0000057,2.64e-12,76;CL:0002617,5.95e-11,2;CL:0002195,8.36e-11,2;CL:0002571,8.36e-11,2;CL:0000134,3.61e-08,354;CL:0002320,7.17e-08,361;CL:0000214,5.06e-07,3;CL:0000219,7.97e-07,386;CL:0000048,8.65e-07,427;CL:0002620,9.44e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.26e-09;5!DOID:450;4.26e-09;5!DOID:66;4.26e-09;5!DOID:423;4.26e-09;5!DOID:0080000;4.26e-09;5!DOID:11722;4.26e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.23e-09,5;DOID:450,3.23e-09,5;DOID:66,3.23e-09,5;DOID:423,3.23e-09,5;DOID:0080000,3.23e-09,5;DOID:11722,3.23e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.59e-09!9;UBERON:0003688!5.17e-09!6;UBERON:0002358!5.17e-09!6;UBERON:0003684!5.17e-09!6;UBERON:0001178!5.17e-09!6;UBERON:0004457!6.01e-08!12;UBERON:0000042!6.01e-08!12;UBERON:0004923!3.59e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.09e-33;9!UBERON:0000042;2.09e-33;9!UBERON:0003688;1.97e-29;6!UBERON:0002358;1.97e-29;6!UBERON:0003684;1.97e-29;6!UBERON:0001178;1.97e-29;6!UBERON:0000310;4.50e-12;10!UBERON:0001443;5.99e-11;11!UBERON:0005406;1.09e-10;2!UBERON:0006915;5.54e-07;3!UBERON:0007616;5.54e-07;3!UBERON:0002217;5.54e-07;3!UBERON:0002018;5.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.55e-29,6;UBERON:0002358,3.55e-29,6;UBERON:0003684,3.55e-29,6;UBERON:0001178,3.55e-29,6;UBERON:0004457,1.30e-24,12;UBERON:0000042,1.30e-24,12;UBERON:0000310,3.62e-12,10;UBERON:0001443,4.92e-11,11;UBERON:0005406,8.78e-11,2;UBERON:0002384,1.82e-07,371;UBERON:0006915,5.06e-07,3;UBERON:0007616,5.06e-07,3;UBERON:0002217,5.06e-07,3;UBERON:0002018,5.06e-07,3 | |||
|phase1_expression=4.90531624030503,2.35510576280081,5.92008497203079,1.0007329835313,4.46961094427288,7.85104671690332,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,1.00267582127178,0.724232594804119,0,0,0,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.39293562831038,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0.919463387397059,0.150238058906597,0,0,1.92201649936711,2.11931901159562,0,2.47326070172253,0,1.11670113798954,0.168776332241266,1.07180705677318,0.252433774244115,2.20919756741518,0,0,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.946454400318751,0.842923450390509,0.723033089650446,0.992645754591546,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0.721832238805369,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,1.80980402060889,0,0,0.26593811658487,0,0,0,0,2.14466990487221,1.08524321078289,0,0,3.909311436168,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,1.15825045334063,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,3.03329280955175,2.20783381047509,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,7.69134204238208,1.53461973288062,3.36792113319688,6.02254001501795,5.62877973973374,4.18220194973379,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.459257792658427,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0,0,0,0.762520775695299,0,0,0,0,0.719489830333259,0,0,0,0,0,0.975267478179181,0,0,0,0.707027159768564,0,0,0,1.31535265576129,0,0,0,0,0,0,0.196498082026242,0,0,1.47775344708365,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,3.11039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0.455768223388005,0,0,0,0.31900115973192,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.146178634172371,0,0,0.0882561266915003,0.225980740780532,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.313808538937,0.101998217636322,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,1.08089965062721,0,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,4.35214242695579,1.5041393641362,2.14441903734423,1.96723578425883,0.157054096250234,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0.934853239388898,0,0,0.50313580350515,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0.829412415681711,0,0.521745061811734,0,0.761610424337591,0,0,0.107410557042488,0,0.796191777397232,0,0,0.673498977531838,0,0.385239660814607,0,0,0.453411851024545,0,0.97894681802587,1.4327107286519,0,0.438568099157414,0,0.192914038270915,0,0.256241518587947,0.345430341731199,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0.659643100472575,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.743990036333503,0.462175628631418,1.29787968637137,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.320182037633146,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |||
|short_description=p10@PGRMC2 | |||
}} |
Latest revision as of 02:56, 25 September 2015
Short description: | p10@PGRMC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PGRMC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000503588_5end |
EntrezGene: | PGRMC2 |
HGNC: | 16089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.43e-30 | 15 |
preadipocyte | 2.80e-19 | 12 |
omentum preadipocyte | 7.20e-16 | 3 |
preadipocyte of the breast | 2.10e-15 | 3 |
adipocyte of omentum tissue | 4.32e-15 | 3 |
fibroblast | 2.64e-12 | 76 |
adipocyte of breast | 5.95e-11 | 2 |
hepatic stem cell | 8.36e-11 | 2 |
hepatic mesenchymal stem cell | 8.36e-11 | 2 |
mesenchymal cell | 3.61e-08 | 354 |
connective tissue cell | 7.17e-08 | 361 |
synovial cell | 5.06e-07 | 3 |
motile cell | 7.97e-07 | 386 |
multi fate stem cell | 8.65e-07 | 427 |
skin fibroblast | 9.44e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.55e-29 | 6 |
peritoneum | 3.55e-29 | 6 |
abdominal cavity | 3.55e-29 | 6 |
visceral peritoneum | 3.55e-29 | 6 |
cavity lining | 1.30e-24 | 12 |
serous membrane | 1.30e-24 | 12 |
breast | 3.62e-12 | 10 |
chest | 4.92e-11 | 11 |
perirenal fat | 8.78e-11 | 2 |
connective tissue | 1.82e-07 | 371 |
stratified squamous epithelium | 5.06e-07 | 3 |
layer of synovial tissue | 5.06e-07 | 3 |
synovial joint | 5.06e-07 | 3 |
synovial membrane of synovial joint | 5.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.23e-09 | 5 |
myotonic disease | 3.23e-09 | 5 |
muscle tissue disease | 3.23e-09 | 5 |
myopathy | 3.23e-09 | 5 |
muscular disease | 3.23e-09 | 5 |
myotonic dystrophy | 3.23e-09 | 5 |