FFCP PHASE1:Hg19::chr22:44894027..44894039,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:44894027..44894039,- to FFCP PHASE1:Hg19::chr22:44894027..44894039,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84247 | |EntrezGene=84247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13343 | |HGNC=13343 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ICC9,Q9BQJ3 | |UniProt=Q6ICC9,Q9BQJ3 | ||
|association_with_transcript=-22bp_to_NM_032287,uc003beu.1_5end | |||
|cluster_id=chr22:44894027..44894039,- | |||
|description=CAGE_peak_5_at_LDOC1L_5end | |||
|id=chr22:44894027..44894039,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.54e-10;6!CL:0002619;1.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.38e-10,6;CL:0002194,3.65e-09,59;CL:0000576,3.65e-09,59;CL:0000040,3.65e-09,59;CL:0000559,3.65e-09,59;CL:0002009,1.03e-08,61;CL:0000557,1.37e-08,67;CL:0002619,7.55e-08,3;CL:0000839,1.03e-07,66;CL:0000473,2.60e-07,48;CL:0000234,2.60e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.30e-08!511;UBERON:0000467!1.87e-07!625;UBERON:0000480!2.84e-07!626;UBERON:0000468!3.86e-07!659;UBERON:0001893!4.10e-07!34;UBERON:0001869!5.34e-07!32;UBERON:0003056!9.43e-07!61;UBERON:0002791!9.59e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.14e-08;22!UBERON:0001950;4.30e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.00e-08,22;UBERON:0001474,9.46e-08,82;UBERON:0001950,1.78e-07,20;UBERON:0002791,2.44e-07,32;UBERON:0001869,2.44e-07,32;UBERON:0002371,5.16e-07,76;UBERON:0000956,6.08e-07,25;UBERON:0000203,6.08e-07,25;UBERON:0003528,9.07e-07,34;UBERON:0002020,9.07e-07,34;UBERON:0001893,9.07e-07,34 | |||
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| ||
|short_description=p5@LDOC1L | |||
}} | }} |
Latest revision as of 02:50, 25 September 2015
Short description: | p5@LDOC1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LDOC1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_NM_032287, uc003beu.1_5end |
EntrezGene: | LDOC1L |
HGNC: | 13343 |
UniProt: | Q6ICC9Q9BQJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.38e-10 | 6 |
monopoietic cell | 3.65e-09 | 59 |
monocyte | 3.65e-09 | 59 |
monoblast | 3.65e-09 | 59 |
promonocyte | 3.65e-09 | 59 |
macrophage dendritic cell progenitor | 1.03e-08 | 61 |
granulocyte monocyte progenitor cell | 1.37e-08 | 67 |
adult endothelial progenitor cell | 7.55e-08 | 3 |
myeloid lineage restricted progenitor cell | 1.03e-07 | 66 |
defensive cell | 2.60e-07 | 48 |
phagocyte | 2.60e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.00e-08 | 22 |
bone element | 9.46e-08 | 82 |
neocortex | 1.78e-07 | 20 |
regional part of telencephalon | 2.44e-07 | 32 |
cerebral hemisphere | 2.44e-07 | 32 |
bone marrow | 5.16e-07 | 76 |
cerebral cortex | 6.08e-07 | 25 |
pallium | 6.08e-07 | 25 |
brain grey matter | 9.07e-07 | 34 |
gray matter | 9.07e-07 | 34 |
telencephalon | 9.07e-07 | 34 |