FFCP PHASE1:Hg19::chr22:44894027..44894039,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84247 | |EntrezGene=84247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13343 | |HGNC=13343 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ICC9,Q9BQJ3 | |UniProt=Q6ICC9,Q9BQJ3 | ||
|association_with_transcript=-22bp_to_NM_032287,uc003beu.1_5end | |association_with_transcript=-22bp_to_NM_032287,uc003beu.1_5end | ||
|cluster_id=chr22:44894027..44894039,- | |||
|description=CAGE_peak_5_at_LDOC1L_5end | |description=CAGE_peak_5_at_LDOC1L_5end | ||
|id=chr22:44894027..44894039,- | |id=chr22:44894027..44894039,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;3.54e-10;6!CL:0002619;1.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.38e-10,6;CL:0002194,3.65e-09,59;CL:0000576,3.65e-09,59;CL:0000040,3.65e-09,59;CL:0000559,3.65e-09,59;CL:0002009,1.03e-08,61;CL:0000557,1.37e-08,67;CL:0002619,7.55e-08,3;CL:0000839,1.03e-07,66;CL:0000473,2.60e-07,48;CL:0000234,2.60e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.30e-08!511;UBERON:0000467!1.87e-07!625;UBERON:0000480!2.84e-07!626;UBERON:0000468!3.86e-07!659;UBERON:0001893!4.10e-07!34;UBERON:0001869!5.34e-07!32;UBERON:0003056!9.43e-07!61;UBERON:0002791!9.59e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.14e-08;22!UBERON:0001950;4.30e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.00e-08,22;UBERON:0001474,9.46e-08,82;UBERON:0001950,1.78e-07,20;UBERON:0002791,2.44e-07,32;UBERON:0001869,2.44e-07,32;UBERON:0002371,5.16e-07,76;UBERON:0000956,6.08e-07,25;UBERON:0000203,6.08e-07,25;UBERON:0003528,9.07e-07,34;UBERON:0002020,9.07e-07,34;UBERON:0001893,9.07e-07,34 | |||
|phase1_expression=0.908391896352783,0,0.845726424575827,1.0007329835313,1.34088328328186,0.872338524100369,0,1.26343974685366,0.783556884599516,1.72013755551056,0,0.436882744260345,1.05506791291381,0.247532705920093,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.984968464614303,0.408001382488506,0.940364164434263,0.286235987131057,0.821246550437305,0.376627918784408,0,0,0,0,0,0.619264493264304,0.919421224478927,0,0,0,0,0,0.553995408531877,0.802177789880567,0.217010870715852,1.34349284543955,1.6194683300949,2.83333124397605,0,0.755751887377619,0,1.16214518452842,1.23350366406548,0.929119112685311,0.28769239232215,0.512321413058201,0.47296445977717,0.689491361473237,1.93645405075148,0,0.188242339542605,1.91034305040492,1.34834090667051,0.306083892370903,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,0,0.290209238628584,2.26954089876456,2.4912889959823,0,0.521482918420201,0,0,0.368277635987565,2.21523671208619,0,1.27562579979026,0.838634582033504,0.22465726229299,0.150176892841506,0,0,0.59675003159727,1.0959849225878,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0.535081656179426,0,0.339928028092699,0,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0,1.64225599384209,0,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.579386075843295,0.795285947051099,0,0.850813354476611,0.221729397462564,0.702678285545008,0.72038491523742,0,0,0,1.91542711029194,0.398873881556595,0,0.571994910780128,0,0,0,0,1.13061588384802,0.419499436209906,0,0.417989933073621,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0.976248230192678,0,1.62028389576352,0.357198913136319,0,0.112611480483322,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0.872188104285069,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,1.12135520028461,0,0.74000264525148,0.933633106199299,0.269421344139376,0,0.302714855289863,0,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0,0,0,0.61246251376468,0.122834317311768,0.516628905878827,0,0.494533858557114,0,0.718618141816238,0.505008341862199,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,0.600952235626387,0.226864366320042,0.179389635688862,0.427114777637135,1.27159140695737,0.300091096084402,0.309157587715317,0,1.30281799432113,0.168776332241266,0.389748020644795,0.252433774244115,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.243947412259191,0.662648841607426,1.04574548582567,0.725627385107593,0,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,0.591534000199219,0.337169380156203,0.723033089650446,0.441175890929576,0.653638332277218,1.18635309555548,0.404493924480493,0.784885860501384,0.769494313892781,0.738155454624648,0,1.6462960453256,2.94017422771084,0,0,0,0.441463099414651,0.368965315629341,0.514703430895577,0,0,0,0.185176890317059,0.651616610620649,1.03993478527958,1.44331342025273,0.579652024875384,0.469634776943287,0.577465791044295,0.925971025153221,0.380508304469197,0,0,1.47730203652438,0.468008530278475,1.18904929830983,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0.528290604079356,0.207328115540772,0.144119953416961,0.25248486685276,0.380987365753014,0,0,0,0.205654985406647,0.600686115687835,0,0.224262168690721,0,0.22001485746285,0.258543431515556,3.57656445851882,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0.65147236858747,0.710783897485092,0,0,0,0.099972991182057,7.29742683847143,3.01354254859276,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.358121926479791,0.112085143993527,0,0.215627574859517,0.513372145118994,0.254094624222463,0,2.31986643833309,2.17771144934653,3.18969375826582,0,0,0.414415513436035,0.36807447515742,0,0.813795071099207,0.207970861530807,0,0.630809660135739,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,1.76221041716467,0,0.413536052245775,0.431428401637234,0.106727557803444,0.909382714338778,1.66435439510497,1.20956117331872,0.744323423456331,0,0,0.256278298511402,0,0.482561763430822,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0,0.120859449591622,0,0.184161977871793,0.68888668898764,0,0.131124414959424,1.35359883872224,0.0770153371044148,1.56869953835371,0,0,0,0.340187410553031,0,0,0,0.501689773854853,0,0.831076008928724,0.671624264166535,0,0.261435451024901,0.256450125116389,0.984043937099117,0.650756789328606,0.618246069886334,0,0.330037999682352,1.14853107599234,0,0,0.48335359146061,0.154048617114644,0,0.137836572484531,0.322260734604821,0.435050081742686,0.0852266274161009,0.445160178233687,0.165284915360978,0.192190067365106,0.382838137483752,0,0,0,0,0,1.06461206063404,0,0.18532421910392,0,0,0.632758849437452,0.571890581771475,0.255897791311334,0.42793898803392,0,0,0.53961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| ||
|short_description=p5@LDOC1L | |short_description=p5@LDOC1L | ||
}} | }} |
Latest revision as of 02:50, 25 September 2015
Short description: | p5@LDOC1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LDOC1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_NM_032287, uc003beu.1_5end |
EntrezGene: | LDOC1L |
HGNC: | 13343 |
UniProt: | Q6ICC9Q9BQJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.38e-10 | 6 |
monopoietic cell | 3.65e-09 | 59 |
monocyte | 3.65e-09 | 59 |
monoblast | 3.65e-09 | 59 |
promonocyte | 3.65e-09 | 59 |
macrophage dendritic cell progenitor | 1.03e-08 | 61 |
granulocyte monocyte progenitor cell | 1.37e-08 | 67 |
adult endothelial progenitor cell | 7.55e-08 | 3 |
myeloid lineage restricted progenitor cell | 1.03e-07 | 66 |
defensive cell | 2.60e-07 | 48 |
phagocyte | 2.60e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.00e-08 | 22 |
bone element | 9.46e-08 | 82 |
neocortex | 1.78e-07 | 20 |
regional part of telencephalon | 2.44e-07 | 32 |
cerebral hemisphere | 2.44e-07 | 32 |
bone marrow | 5.16e-07 | 76 |
cerebral cortex | 6.08e-07 | 25 |
pallium | 6.08e-07 | 25 |
brain grey matter | 9.07e-07 | 34 |
gray matter | 9.07e-07 | 34 |
telencephalon | 9.07e-07 | 34 |