FFCP PHASE1:Hg19::chr12:8276224..8276237,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:8276224..8276237,+ to FFCP PHASE1:Hg19::chr12:8276224..8276237,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50856 | |EntrezGene=50856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13257 | |HGNC=13257 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMR7 | |UniProt=Q9UMR7 | ||
|association_with_transcript=0bp_to_ENST00000229332,NM_016184,NM_194447,NM_194448,NM_194450,uc001qtz.1,uc001qub.1,uc001quc.1,uc009zga.1,uc009zgb.1_5end | |||
|cluster_id=chr12:8276224..8276237,+ | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_3_at_CLEC4A_5end | |||
|id=chr12:8276224..8276237,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.14e-60!76;CL:0002009!3.00e-58!65;CL:0002194!5.24e-56!63;CL:0000576!5.24e-56!63;CL:0000040!5.24e-56!63;CL:0000559!5.24e-56!63;CL:0000738!9.44e-53!140;CL:0000557!1.47e-51!71;CL:0002057!2.88e-51!42;CL:0000839!2.19e-48!70;CL:0000860!9.63e-47!45;CL:0002087!2.04e-45!119;CL:0002031!3.76e-41!124;CL:0000037!1.30e-38!172;CL:0000566!1.30e-38!172;CL:0000763!5.06e-38!112;CL:0000049!5.06e-38!112;CL:0002032!1.95e-35!165;CL:0000837!1.95e-35!165;CL:0000988!6.71e-35!182;CL:0002393!6.62e-12!9;CL:0002397!6.62e-12!9;CL:0000094!1.53e-11!8;CL:0000840!1.25e-08!5;CL:0001029!1.25e-08!5;CL:0000081!8.39e-08!11;CL:0000236!4.01e-07!14;CL:0000134!5.05e-07!358;CL:0000451!6.37e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.66e-62;39!CL:0000234;3.66e-62;39!CL:0000860;1.91e-61;33!CL:0002057;1.91e-61;33!CL:0000576;7.90e-55;48!CL:0000766;1.22e-44;69!CL:0000763;3.32e-20;100!CL:0000738;5.98e-20;136!CL:0002087;1.58e-18;104!CL:0000094;1.93e-18;8!CL:0000235;1.49e-14;6!CL:0000081;5.84e-13;11!CL:0002393;6.40e-13;6!CL:0002397;6.40e-13;6!CL:0000988;1.37e-11;177!CL:0000840;4.99e-10;5!CL:0000219;6.28e-09;193!CL:0000775;8.87e-09;3!CL:0000236;1.48e-08;13!CL:0002619;5.26e-08;3!CL:0000875;7.46e-08;3!CL:0002396;7.46e-08;3!CL:0000451;4.34e-07;10!CL:0000767;8.20e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.26e-110,72;CL:0002009,3.89e-105,61;CL:0002194,2.82e-101,59;CL:0000576,2.82e-101,59;CL:0000040,2.82e-101,59;CL:0000559,2.82e-101,59;CL:0000473,7.20e-100,48;CL:0000234,7.20e-100,48;CL:0000557,1.98e-94,67;CL:0000839,4.83e-89,66;CL:0000860,4.26e-86,42;CL:0002057,4.26e-86,42;CL:0000738,2.05e-84,136;CL:0000763,5.08e-73,108;CL:0000049,5.08e-73,108;CL:0002087,4.31e-72,115;CL:0002031,3.11e-66,120;CL:0000037,8.99e-65,168;CL:0002032,1.17e-60,161;CL:0000837,1.17e-60,161;CL:0000988,1.61e-60,177;CL:0000134,1.39e-21,354;CL:0002320,8.60e-21,361;CL:0002393,4.58e-19,9;CL:0002397,4.58e-19,9;CL:0000094,1.89e-18,8;CL:0000219,5.15e-18,386;CL:0000048,1.25e-14,427;CL:0000235,1.51e-14,6;CL:0000723,3.64e-14,433;CL:0000034,1.45e-13,441;CL:0000081,5.75e-13,11;CL:0000840,5.09e-10,5;CL:0001029,5.09e-10,5;CL:0000775,8.77e-09,3;CL:0002619,5.33e-08,3;CL:0000875,7.55e-08,3;CL:0002396,7.55e-08,3;CL:0000236,7.59e-08,14;CL:0000451,4.72e-07,10;CL:0000767,7.95e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.24e-61;42!CL:0000049;1.36e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.93e-56!102;UBERON:0003061!9.93e-56!102;UBERON:0002193!1.88e-51!112;UBERON:0002371!2.02e-43!80;UBERON:0001474!5.88e-39!86;UBERON:0002405!6.26e-33!115;UBERON:0004765!2.65e-31!101;UBERON:0001434!2.65e-31!101;UBERON:0007023!2.27e-22!115;UBERON:0003081!4.00e-18!216;UBERON:0002204!2.07e-15!167;UBERON:0000178!9.38e-12!15;UBERON:0000179!9.38e-12!15;UBERON:0000463!9.38e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-19;15!UBERON:0000179;1.08e-19;15!UBERON:0000463;1.08e-19;15!UBERON:0002390;1.35e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.42e-96,98;UBERON:0003061,1.42e-96,98;UBERON:0002193,9.34e-89,108;UBERON:0002371,1.68e-81,76;UBERON:0001474,1.91e-74,82;UBERON:0002405,8.17e-69,93;UBERON:0004765,1.74e-66,90;UBERON:0001434,2.58e-58,100;UBERON:0003081,1.82e-37,203;UBERON:0002204,8.78e-29,167;UBERON:0000178,1.01e-19,15;UBERON:0000179,1.01e-19,15;UBERON:0000463,1.01e-19,15;UBERON:0002384,1.02e-19,371;UBERON:0000926,1.15e-18,315;UBERON:0004120,1.15e-18,315;UBERON:0006603,1.15e-18,315 | |||
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| ||
|short_description=p3@CLEC4A | |||
}} | }} |
Latest revision as of 02:38, 25 September 2015
Short description: | p3@CLEC4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLEC4A_5end |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | 0bp_to_ENST00000229332, NM_016184, NM_194447, NM_194448, NM_194450, uc001qtz.1, uc001qub.1, uc001quc.1, uc009zga.1, uc009zgb.1_5end |
EntrezGene: | CLEC4A |
HGNC: | 13257 |
UniProt: | Q9UMR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.42e-96 | 98 |
blood island | 1.42e-96 | 98 |
hemolymphoid system | 9.34e-89 | 108 |
bone marrow | 1.68e-81 | 76 |
bone element | 1.91e-74 | 82 |
immune system | 8.17e-69 | 93 |
skeletal element | 1.74e-66 | 90 |
skeletal system | 2.58e-58 | 100 |
lateral plate mesoderm | 1.82e-37 | 203 |
musculoskeletal system | 8.78e-29 | 167 |
blood | 1.01e-19 | 15 |
haemolymphatic fluid | 1.01e-19 | 15 |
organism substance | 1.01e-19 | 15 |
connective tissue | 1.02e-19 | 371 |
mesoderm | 1.15e-18 | 315 |
mesoderm-derived structure | 1.15e-18 | 315 |
presumptive mesoderm | 1.15e-18 | 315 |