FFCP PHASE1:Hg19::chr12:8276189..8276197,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50856 | |EntrezGene=50856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13257 | |HGNC=13257 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMR7 | |UniProt=Q9UMR7 | ||
|association_with_transcript=-30bp_to_ENST00000229332,NM_016184,NM_194447,NM_194448,NM_194450,uc001qtz.1,uc001qub.1,uc001quc.1,uc009zga.1,uc009zgb.1_5end | |association_with_transcript=-30bp_to_ENST00000229332,NM_016184,NM_194447,NM_194448,NM_194450,uc001qtz.1,uc001qub.1,uc001quc.1,uc009zga.1,uc009zgb.1_5end | ||
|cluster_id=chr12:8276189..8276197,+ | |||
|coexpression_cluster_id=C2245 | |||
|description=CAGE_peak_6_at_CLEC4A_5end | |description=CAGE_peak_6_at_CLEC4A_5end | ||
|id=chr12:8276189..8276197,+ | |id=chr12:8276189..8276197,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.27e-74!76;CL:0002009!9.85e-70!65;CL:0002194!2.04e-66!63;CL:0000576!2.04e-66!63;CL:0000040!2.04e-66!63;CL:0000559!2.04e-66!63;CL:0002057!4.26e-65!42;CL:0000738!1.81e-64!140;CL:0000557!1.79e-62!71;CL:0000860!7.61e-60!45;CL:0000839!3.26e-58!70;CL:0002087!1.16e-52!119;CL:0000763!1.68e-48!112;CL:0000049!1.68e-48!112;CL:0000037!2.53e-48!172;CL:0000566!2.53e-48!172;CL:0002031!6.05e-48!124;CL:0000988!1.91e-44!182;CL:0002032!2.41e-43!165;CL:0000837!2.41e-43!165;CL:0002393!6.38e-17!9;CL:0002397!6.38e-17!9;CL:0000094!1.36e-15!8;CL:0000134!2.68e-13!358;CL:0002320!1.19e-12!365;CL:0000840!8.60e-12!5;CL:0001029!8.60e-12!5;CL:0000081!7.76e-11!11;CL:0000219!2.15e-10!390;CL:0000451!4.08e-10!10;CL:0000034!2.93e-08!444;CL:0000048!3.09e-08!430;CL:0000723!7.35e-08!436;CL:0000990!1.57e-07!8;CL:0000775!2.25e-07!3;CL:0000875!3.10e-07!3;CL:0002396!3.10e-07!3 | |ontology_enrichment_celltype=CL:0000766!2.27e-74!76;CL:0002009!9.85e-70!65;CL:0002194!2.04e-66!63;CL:0000576!2.04e-66!63;CL:0000040!2.04e-66!63;CL:0000559!2.04e-66!63;CL:0002057!4.26e-65!42;CL:0000738!1.81e-64!140;CL:0000557!1.79e-62!71;CL:0000860!7.61e-60!45;CL:0000839!3.26e-58!70;CL:0002087!1.16e-52!119;CL:0000763!1.68e-48!112;CL:0000049!1.68e-48!112;CL:0000037!2.53e-48!172;CL:0000566!2.53e-48!172;CL:0002031!6.05e-48!124;CL:0000988!1.91e-44!182;CL:0002032!2.41e-43!165;CL:0000837!2.41e-43!165;CL:0002393!6.38e-17!9;CL:0002397!6.38e-17!9;CL:0000094!1.36e-15!8;CL:0000134!2.68e-13!358;CL:0002320!1.19e-12!365;CL:0000840!8.60e-12!5;CL:0001029!8.60e-12!5;CL:0000081!7.76e-11!11;CL:0000219!2.15e-10!390;CL:0000451!4.08e-10!10;CL:0000034!2.93e-08!444;CL:0000048!3.09e-08!430;CL:0000723!7.35e-08!436;CL:0000990!1.57e-07!8;CL:0000775!2.25e-07!3;CL:0000875!3.10e-07!3;CL:0002396!3.10e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-58;33!CL:0002057;1.46e-58;33!CL:0000473;2.03e-48;39!CL:0000234;2.03e-48;39!CL:0000576;2.55e-46;48!CL:0000766;4.97e-40;69!CL:0000094;2.52e-26;8!CL:0000081;9.22e-19;11!CL:0000763;2.77e-17;100!CL:0000738;4.99e-14;136!CL:0002087;2.92e-13;104!CL:0000775;8.13e-12;3!CL:0000875;1.64e-11;3!CL:0002396;1.64e-11;3!CL:0000988;2.10e-10;177!CL:0000767;3.69e-10;3!CL:0000840;1.02e-09;5!CL:0002393;1.35e-09;6!CL:0002397;1.35e-09;6!CL:0000771;7.98e-08;2!CL:0000451;1.06e-07;10!CL:0000219;1.45e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.44e-96,72;CL:0000860,3.96e-84,42;CL:0002057,3.96e-84,42;CL:0002009,6.69e-82,61;CL:0000473,6.81e-82,48;CL:0000234,6.81e-82,48;CL:0002194,1.72e-80,59;CL:0000576,1.72e-80,59;CL:0000040,1.72e-80,59;CL:0000559,1.72e-80,59;CL:0000557,9.08e-74,67;CL:0000839,5.01e-71,66;CL:0000738,4.00e-66,136;CL:0000763,9.12e-64,108;CL:0000049,9.12e-64,108;CL:0000037,2.47e-51,168;CL:0002087,4.27e-51,115;CL:0002032,1.20e-49,161;CL:0000837,1.20e-49,161;CL:0002031,1.60e-48,120;CL:0000988,3.95e-48,177;CL:0000094,2.39e-26,8;CL:0000081,8.88e-19,11;CL:0002393,1.60e-18,9;CL:0002397,1.60e-18,9;CL:0000134,4.49e-18,354;CL:0002320,1.73e-17,361;CL:0000219,2.02e-15,386;CL:0000048,6.80e-13,427;CL:0000723,1.52e-12,433;CL:0000034,4.28e-12,441;CL:0000775,7.90e-12,3;CL:0000875,1.39e-11,3;CL:0002396,1.39e-11,3;CL:0000767,3.77e-10,3;CL:0000840,1.00e-09,5;CL:0001029,1.00e-09,5;CL:0000771,7.61e-08,2;CL:0000451,1.24e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.25e-63;42!CL:0000049;2.77e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-64!102;UBERON:0003061!2.10e-64!102;UBERON:0002193!7.07e-59!112;UBERON:0002371!1.29e-53!80;UBERON:0001474!9.70e-49!86;UBERON:0004765!9.71e-41!101;UBERON:0001434!9.71e-41!101;UBERON:0002405!4.33e-38!115;UBERON:0003081!6.56e-24!216;UBERON:0002204!2.71e-19!167;UBERON:0002384!9.02e-12!375;UBERON:0000178!1.32e-10!15;UBERON:0000179!1.32e-10!15;UBERON:0000463!1.32e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.94e-07;15!UBERON:0000179;1.94e-07;15!UBERON:0000463;1.94e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.79e-64,98;UBERON:0003061,1.79e-64,98;UBERON:0002371,6.03e-64,76;UBERON:0001474,1.40e-58,82;UBERON:0002193,1.55e-57,108;UBERON:0004765,1.57e-52,90;UBERON:0002405,1.59e-50,93;UBERON:0001434,2.59e-46,100;UBERON:0003081,1.48e-25,203;UBERON:0002204,8.69e-24,167;UBERON:0002384,1.09e-16,371;UBERON:0000926,1.33e-12,315;UBERON:0004120,1.33e-12,315;UBERON:0006603,1.33e-12,315;UBERON:0000178,2.53e-07,15;UBERON:0000179,2.53e-07,15;UBERON:0000463,2.53e-07,15 | |||
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|short_description=p6@CLEC4A | |short_description=p6@CLEC4A | ||
}} | }} |
Latest revision as of 02:37, 25 September 2015
Short description: | p6@CLEC4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CLEC4A_5end |
Coexpression cluster: | C2245_Mast_CD14_Synoviocyte_Neutrophils_Dendritic_CD14CD16_Whole |
Association with transcript: | -30bp_to_ENST00000229332, NM_016184, NM_194447, NM_194448, NM_194450, uc001qtz.1, uc001qub.1, uc001quc.1, uc009zga.1, uc009zgb.1_5end |
EntrezGene: | CLEC4A |
HGNC: | 13257 |
UniProt: | Q9UMR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.79e-64 | 98 |
blood island | 1.79e-64 | 98 |
bone marrow | 6.03e-64 | 76 |
bone element | 1.40e-58 | 82 |
hemolymphoid system | 1.55e-57 | 108 |
skeletal element | 1.57e-52 | 90 |
immune system | 1.59e-50 | 93 |
skeletal system | 2.59e-46 | 100 |
lateral plate mesoderm | 1.48e-25 | 203 |
musculoskeletal system | 8.69e-24 | 167 |
connective tissue | 1.09e-16 | 371 |
mesoderm | 1.33e-12 | 315 |
mesoderm-derived structure | 1.33e-12 | 315 |
presumptive mesoderm | 1.33e-12 | 315 |
blood | 2.53e-07 | 15 |
haemolymphatic fluid | 2.53e-07 | 15 |
organism substance | 2.53e-07 | 15 |