FFCP PHASE1:Hg19::chr11:111385487..111385494,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399949 | |EntrezGene=399949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25061 | |HGNC=25061 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAN0,Q6PI97,E9PN74 | |UniProt=E9PAN0,Q6PI97,E9PN74 | ||
|association_with_transcript=-15bp_to_ENST00000332814,ENST00000375618,ENST00000529167,NM_001100388,NM_207430,uc001pln.3,uc001plo.1,uc009yyd.2_5end | |association_with_transcript=-15bp_to_ENST00000332814,ENST00000375618,ENST00000529167,NM_001100388,NM_207430,uc001pln.3,uc001plo.1,uc009yyd.2_5end | ||
|cluster_id=chr11:111385487..111385494,+ | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_4_at_C11orf88_5end | |description=CAGE_peak_4_at_C11orf88_5end | ||
|id=chr11:111385487..111385494,+ | |id=chr11:111385487..111385494,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001896!8.01e-18!3;UBERON:0005290!8.01e-18!3;UBERON:0010096!8.01e-18!3;UBERON:0002298!1.11e-17!8;UBERON:0007023!7.90e-16!115;UBERON:0000341!6.32e-13!2;UBERON:0004733!1.00e-11!12;UBERON:0002028!1.00e-11!12;UBERON:0007277!1.00e-11!12;UBERON:0004732!8.32e-11!13;UBERON:0003076!2.46e-09!15;UBERON:0003057!2.46e-09!15;UBERON:0000988!1.68e-08!3;UBERON:0002171!2.37e-07!1;UBERON:0006518!2.37e-07!1;UBERON:0008949!2.37e-07!1;UBERON:0000101!2.37e-07!1;UBERON:0002167!2.37e-07!1;UBERON:0001301!4.85e-07!1;UBERON:0002336!5.45e-07!1;UBERON:0001018!5.45e-07!1;UBERON:0002473!5.45e-07!1;UBERON:0005340!5.45e-07!1;UBERON:0002316!5.45e-07!1;UBERON:0003544!5.45e-07!1;UBERON:0001020!5.45e-07!1;UBERON:0005970!5.45e-07!1;UBERON:0002437!5.45e-07!1;UBERON:0006834!6.12e-07!1 | |ontology_enrichment_uberon=UBERON:0001896!8.01e-18!3;UBERON:0005290!8.01e-18!3;UBERON:0010096!8.01e-18!3;UBERON:0002298!1.11e-17!8;UBERON:0007023!7.90e-16!115;UBERON:0000341!6.32e-13!2;UBERON:0004733!1.00e-11!12;UBERON:0002028!1.00e-11!12;UBERON:0007277!1.00e-11!12;UBERON:0004732!8.32e-11!13;UBERON:0003076!2.46e-09!15;UBERON:0003057!2.46e-09!15;UBERON:0000988!1.68e-08!3;UBERON:0002171!2.37e-07!1;UBERON:0006518!2.37e-07!1;UBERON:0008949!2.37e-07!1;UBERON:0000101!2.37e-07!1;UBERON:0002167!2.37e-07!1;UBERON:0001301!4.85e-07!1;UBERON:0002336!5.45e-07!1;UBERON:0001018!5.45e-07!1;UBERON:0002473!5.45e-07!1;UBERON:0005340!5.45e-07!1;UBERON:0002316!5.45e-07!1;UBERON:0003544!5.45e-07!1;UBERON:0001020!5.45e-07!1;UBERON:0005970!5.45e-07!1;UBERON:0002437!5.45e-07!1;UBERON:0006834!6.12e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;4.52e-50;2!UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0003126;1.91e-15;7!UBERON:0001005;1.91e-15;7!UBERON:0001041;1.86e-08;14!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.52e-50,2;UBERON:0003126,1.91e-15,7;UBERON:0001005,1.91e-15,7;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15 | |||
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|short_description=p4@C11orf88 | |short_description=p4@C11orf88 | ||
}} | }} |
Latest revision as of 02:37, 25 September 2015
Short description: | p4@C11orf88 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C11orf88_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | -15bp_to_ENST00000332814, ENST00000375618, ENST00000529167, NM_001100388, NM_207430, uc001pln.3, uc001plo.1, uc009yyd.2_5end |
EntrezGene: | C11orf88 |
HGNC: | 25061 |
UniProt: | E9PAN0Q6PI97E9PN74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.52e-50 | 2 |
trachea | 1.91e-15 | 7 |
respiratory airway | 1.91e-15 | 7 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |