FFCP PHASE1:Hg19::chr12:8276175..8276187,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:8276175..8276187,+
|short_description=p5@CLEC4A
|description=CAGE_peak_5_at_CLEC4A_5end
|association_with_transcript=-40bp_to_ENST00000229332,NM_016184,NM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50856 | |EntrezGene=50856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13257 | |HGNC=13257 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMR7 | |UniProt=Q9UMR7 | ||
|association_with_transcript=-40bp_to_ENST00000229332,NM_016184,NM_194447,NM_194448,NM_194450,uc001qtz.1,uc001qub.1,uc001quc.1,uc009zga.1,uc009zgb.1_5end | |||
|cluster_id=chr12:8276175..8276187,+ | |||
|description=CAGE_peak_5_at_CLEC4A_5end | |||
|id=chr12:8276175..8276187,+ | |||
|ontology_enrichment_celltype=CL:0002009!9.63e-75!65;CL:0002194!2.50e-71!63;CL:0000576!2.50e-71!63;CL:0000040!2.50e-71!63;CL:0000559!2.50e-71!63;CL:0000766!5.67e-69!76;CL:0002057!2.89e-67!42;CL:0000557!7.17e-67!71;CL:0000839!2.04e-62!70;CL:0000738!6.85e-62!140;CL:0000860!9.18e-62!45;CL:0002087!1.90e-57!119;CL:0002031!8.28e-53!124;CL:0000037!1.14e-48!172;CL:0000566!1.14e-48!172;CL:0000763!1.20e-47!112;CL:0000049!1.20e-47!112;CL:0000988!1.25e-44!182;CL:0002032!3.61e-44!165;CL:0000837!3.61e-44!165;CL:0002393!3.68e-15!9;CL:0002397!3.68e-15!9;CL:0000134!9.33e-12!358;CL:0002320!4.06e-11!365;CL:0000236!1.13e-10!14;CL:0000840!1.71e-10!5;CL:0001029!1.71e-10!5;CL:0000451!5.02e-09!10;CL:0000219!6.53e-09!390;CL:0000048!4.10e-07!430;CL:0000723!9.57e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.74e-68;33!CL:0002057;9.74e-68;33!CL:0000473;2.88e-67;39!CL:0000234;2.88e-67;39!CL:0000576;2.26e-58;48!CL:0000766;6.77e-46;69!CL:0000738;4.92e-21;136!CL:0000763;1.59e-19;100!CL:0002087;1.40e-18;104!CL:0002393;1.72e-15;6!CL:0002397;1.72e-15;6!CL:0000236;1.70e-14;13!CL:0000235;3.95e-14;6!CL:0000988;7.92e-12;177!CL:0000840;1.00e-10;5!CL:0000451;2.58e-10;10!CL:0000219;2.88e-09;193!CL:0000767;1.58e-08;3!CL:0000875;3.72e-08;3!CL:0002396;3.72e-08;3!CL:0000094;7.69e-08;8!CL:0000226;1.85e-07;3!CL:0000842;1.85e-07;3!CL:0000945;5.01e-07;24!CL:0000990;5.22e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.58e-110,61;CL:0000473,4.74e-109,48;CL:0000234,4.74e-109,48;CL:0002194,9.42e-105,59;CL:0000576,9.42e-105,59;CL:0000040,9.42e-105,59;CL:0000559,9.42e-105,59;CL:0000766,2.25e-102,72;CL:0000557,6.64e-99,67;CL:0000860,6.50e-96,42;CL:0002057,6.50e-96,42;CL:0000839,2.66e-92,66;CL:0000738,6.69e-85,136;CL:0002087,2.30e-76,115;CL:0000763,1.48e-71,108;CL:0000049,1.48e-71,108;CL:0002031,1.24e-70,120;CL:0000037,1.24e-67,168;CL:0000988,2.41e-63,177;CL:0002032,9.06e-61,161;CL:0000837,9.06e-61,161;CL:0000134,3.86e-23,354;CL:0002320,2.34e-22,361;CL:0002393,6.26e-22,9;CL:0002397,6.26e-22,9;CL:0000219,1.34e-19,386;CL:0000048,3.12e-16,427;CL:0000034,6.40e-16,441;CL:0000723,9.08e-16,433;CL:0000235,7.31e-14,6;CL:0000236,3.48e-13,14;CL:0000840,6.09e-11,5;CL:0001029,6.09e-11,5;CL:0000451,1.84e-10,10;CL:0000767,1.60e-08,3;CL:0000875,4.07e-08,3;CL:0002396,4.07e-08,3;CL:0000094,6.94e-08,8;CL:0000226,2.01e-07,3;CL:0000842,2.01e-07,3;CL:0000990,3.80e-07,8;CL:0000945,5.95e-07,24;CL:0000826,5.95e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-69;42!CL:0000049;1.47e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.25e-68!102;UBERON:0003061!5.25e-68!102;UBERON:0002193!9.78e-64!112;UBERON:0002371!2.87e-57!80;UBERON:0001474!5.54e-52!86;UBERON:0004765!1.58e-41!101;UBERON:0001434!1.58e-41!101;UBERON:0002405!1.88e-41!115;UBERON:0003081!1.87e-22!216;UBERON:0002204!1.21e-20!167;UBERON:0000178!5.84e-13!15;UBERON:0000179!5.84e-13!15;UBERON:0000463!5.84e-13!15;UBERON:0002384!9.79e-11!375;UBERON:0007023!5.06e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-13;15!UBERON:0000179;1.75e-13;15!UBERON:0000463;1.75e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.14e-91,98;UBERON:0003061,2.14e-91,98;UBERON:0002371,1.29e-85,76;UBERON:0002193,1.59e-81,108;UBERON:0001474,2.33e-78,82;UBERON:0004765,3.58e-70,90;UBERON:0002405,1.83e-67,93;UBERON:0001434,9.10e-62,100;UBERON:0003081,4.89e-36,203;UBERON:0002204,2.51e-31,167;UBERON:0002384,2.73e-21,371;UBERON:0000926,1.27e-17,315;UBERON:0004120,1.27e-17,315;UBERON:0006603,1.27e-17,315;UBERON:0000178,1.80e-13,15;UBERON:0000179,1.80e-13,15;UBERON:0000463,1.80e-13,15 | |||
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| ||
|short_description=p5@CLEC4A | |||
}} | }} |
Latest revision as of 02:36, 25 September 2015
Short description: | p5@CLEC4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLEC4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000229332, NM_016184, NM_194447, NM_194448, NM_194450, uc001qtz.1, uc001qub.1, uc001quc.1, uc009zga.1, uc009zgb.1_5end |
EntrezGene: | CLEC4A |
HGNC: | 13257 |
UniProt: | Q9UMR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.14e-91 | 98 |
blood island | 2.14e-91 | 98 |
bone marrow | 1.29e-85 | 76 |
hemolymphoid system | 1.59e-81 | 108 |
bone element | 2.33e-78 | 82 |
skeletal element | 3.58e-70 | 90 |
immune system | 1.83e-67 | 93 |
skeletal system | 9.10e-62 | 100 |
lateral plate mesoderm | 4.89e-36 | 203 |
musculoskeletal system | 2.51e-31 | 167 |
connective tissue | 2.73e-21 | 371 |
mesoderm | 1.27e-17 | 315 |
mesoderm-derived structure | 1.27e-17 | 315 |
presumptive mesoderm | 1.27e-17 | 315 |
blood | 1.80e-13 | 15 |
haemolymphatic fluid | 1.80e-13 | 15 |
organism substance | 1.80e-13 | 15 |