FFCP PHASE1:Hg19::chr19:10764509..10764559,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_024333,uc002mpj.2_5end | |||
|cluster_id=chr19:10764509..10764559,- | |||
|description=CAGE_peak_1_at_LOC147727_5end | |||
|id=chr19:10764509..10764559,- | |||
|ontology_enrichment_celltype=CL:0000037!1.20e-14!172;CL:0000566!1.20e-14!172;CL:0000738!6.49e-14!140;CL:0002031!1.29e-13!124;CL:0000988!1.58e-13!182;CL:0002032!5.53e-13!165;CL:0000837!5.53e-13!165;CL:0002087!5.71e-12!119;CL:0002057!2.42e-10!42;CL:0000838!7.45e-10!52;CL:0000860!1.52e-09!45;CL:0000542!2.73e-09!53;CL:0000051!2.73e-09!53;CL:0000791!3.10e-09!18;CL:0000789!3.10e-09!18;CL:0002420!3.10e-09!18;CL:0002419!3.10e-09!18;CL:0000790!3.10e-09!18;CL:0000625!5.79e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.79e-09;18!CL:0000789;2.79e-09;18!CL:0002419;2.79e-09;18!CL:0000625;4.90e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.45e-15,168;CL:0000738,6.24e-15,136;CL:0002031,1.07e-14,120;CL:0000988,1.70e-14,177;CL:0002032,7.49e-14,161;CL:0000837,7.49e-14,161;CL:0002087,5.52e-13,115;CL:0000860,2.42e-10,42;CL:0002057,2.42e-10,42;CL:0000838,7.45e-10,52;CL:0000542,2.73e-09,53;CL:0000051,2.73e-09,53;CL:0000791,3.10e-09,18;CL:0000789,3.10e-09,18;CL:0002420,3.10e-09,18;CL:0002419,3.10e-09,18;CL:0000790,3.10e-09,18;CL:0000473,1.64e-07,48;CL:0000234,1.64e-07,48;CL:0000625,5.79e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.79e-09;18!CL:0002057;1.94e-07;42!UBERON:0006601;3.61e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.10e-29!115;UBERON:0001017!2.05e-17!82;UBERON:0001049!2.82e-17!57;UBERON:0005068!2.82e-17!57;UBERON:0006241!2.82e-17!57;UBERON:0007135!2.82e-17!57;UBERON:0005743!4.09e-16!86;UBERON:0000073!3.12e-15!94;UBERON:0001016!3.12e-15!94;UBERON:0000955!5.54e-15!69;UBERON:0006238!5.54e-15!69;UBERON:0002616!6.09e-14!59;UBERON:0003080!6.37e-13!42;UBERON:0002780!1.37e-12!41;UBERON:0001890!1.37e-12!41;UBERON:0006240!1.37e-12!41;UBERON:0002020!1.98e-09!34;UBERON:0003528!1.98e-09!34;UBERON:0001893!2.87e-09!34;UBERON:0003075!3.20e-09!86;UBERON:0007284!3.20e-09!86;UBERON:0002791!4.69e-09!33;UBERON:0002346!5.00e-09!90;UBERON:0001869!2.40e-08!32;UBERON:0003056!6.04e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.91e-10;53!UBERON:0002616;5.91e-10;53!UBERON:0002780;2.10e-09;41!UBERON:0001890;2.10e-09;41!UBERON:0007023;2.25e-08;114!UBERON:0003528;3.68e-08;34!UBERON:0002020;3.68e-08;34!UBERON:0001893;4.00e-08;34!UBERON:0002791;4.65e-08;32!UBERON:0001869;1.05e-07;32!UBERON:0000955;2.54e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.58e-29,114;UBERON:0001017,4.41e-17,81;UBERON:0001049,6.19e-17,56;UBERON:0005068,6.19e-17,56;UBERON:0006241,6.19e-17,56;UBERON:0007135,6.19e-17,56;UBERON:0000073,3.93e-16,53;UBERON:0002616,3.93e-16,53;UBERON:0001016,4.66e-16,89;UBERON:0000955,1.17e-14,68;UBERON:0006238,1.17e-14,68;UBERON:0002780,1.37e-12,41;UBERON:0001890,1.37e-12,41;UBERON:0003080,1.37e-12,41;UBERON:0006240,1.37e-12,41;UBERON:0003075,6.21e-10,82;UBERON:0007284,6.21e-10,82;UBERON:0002346,1.06e-09,86;UBERON:0003528,1.98e-09,34;UBERON:0002020,1.98e-09,34;UBERON:0001893,2.87e-09,34;UBERON:0002791,1.12e-08,32;UBERON:0001869,2.40e-08,32;UBERON:0003056,4.84e-07,61;UBERON:0002390,8.44e-07,98;UBERON:0003061,8.44e-07,98 | |||
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| |||
|short_description=p1@LOC147727 | |||
}} |
Latest revision as of 02:35, 25 September 2015
Short description: | p1@LOC147727 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC147727_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_024333, uc002mpj.2_5end |
EntrezGene: | LOC147727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.45e-15 | 168 |
leukocyte | 6.24e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.07e-14 | 120 |
hematopoietic cell | 1.70e-14 | 177 |
hematopoietic oligopotent progenitor cell | 7.49e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.49e-14 | 161 |
nongranular leukocyte | 5.52e-13 | 115 |
classical monocyte | 2.42e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-10 | 42 |
lymphoid lineage restricted progenitor cell | 7.45e-10 | 52 |
lymphocyte | 2.73e-09 | 53 |
common lymphoid progenitor | 2.73e-09 | 53 |
mature alpha-beta T cell | 3.10e-09 | 18 |
alpha-beta T cell | 3.10e-09 | 18 |
immature T cell | 3.10e-09 | 18 |
mature T cell | 3.10e-09 | 18 |
immature alpha-beta T cell | 3.10e-09 | 18 |
defensive cell | 1.64e-07 | 48 |
phagocyte | 1.64e-07 | 48 |
CD8-positive, alpha-beta T cell | 5.79e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.58e-29 | 114 |
central nervous system | 4.41e-17 | 81 |
neural tube | 6.19e-17 | 56 |
neural rod | 6.19e-17 | 56 |
future spinal cord | 6.19e-17 | 56 |
neural keel | 6.19e-17 | 56 |
regional part of nervous system | 3.93e-16 | 53 |
regional part of brain | 3.93e-16 | 53 |
nervous system | 4.66e-16 | 89 |
brain | 1.17e-14 | 68 |
future brain | 1.17e-14 | 68 |
regional part of forebrain | 1.37e-12 | 41 |
forebrain | 1.37e-12 | 41 |
anterior neural tube | 1.37e-12 | 41 |
future forebrain | 1.37e-12 | 41 |
neural plate | 6.21e-10 | 82 |
presumptive neural plate | 6.21e-10 | 82 |
neurectoderm | 1.06e-09 | 86 |
brain grey matter | 1.98e-09 | 34 |
gray matter | 1.98e-09 | 34 |
telencephalon | 2.87e-09 | 34 |
regional part of telencephalon | 1.12e-08 | 32 |
cerebral hemisphere | 2.40e-08 | 32 |
pre-chordal neural plate | 4.84e-07 | 61 |
hematopoietic system | 8.44e-07 | 98 |
blood island | 8.44e-07 | 98 |