FFCP PHASE1:Hg19::chr16:20775295..20775302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6296 | |EntrezGene=6296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10522 | |HGNC=10522 | ||
|TSSclassifier=strong | |||
|UniProt=Q53FZ2 | |UniProt=Q53FZ2 | ||
|association_with_transcript=-9bp_to_ENST00000289416,ENST00000440284,NM_005622,NM_202000,uc002dhq.2,uc002dhr.2_5end | |association_with_transcript=-9bp_to_ENST00000289416,ENST00000440284,NM_005622,NM_202000,uc002dhq.2,uc002dhr.2_5end | ||
|cluster_id=chr16:20775295..20775302,+ | |||
|coexpression_cluster_id=C3542 | |coexpression_cluster_id=C3542 | ||
|description=CAGE_peak_4_at_ACSM3_5end | |description=CAGE_peak_4_at_ACSM3_5end | ||
|id=chr16:20775295..20775302,+ | |id=chr16:20775295..20775302,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.41e-10!4;CL:0002253!2.01e-09!2;CL:0000223!2.51e-09!59;CL:0000181!9.28e-09!12;CL:0000417!9.28e-09!12;CL:0000668!9.28e-09!12;CL:0000414!9.28e-09!12;CL:0000412!9.28e-09!12;CL:0000182!9.28e-09!12 | |ontology_enrichment_celltype=CL:0002563!3.41e-10!4;CL:0002253!2.01e-09!2;CL:0000223!2.51e-09!59;CL:0000181!9.28e-09!12;CL:0000417!9.28e-09!12;CL:0000668!9.28e-09!12;CL:0000414!9.28e-09!12;CL:0000412!9.28e-09!12;CL:0000182!9.28e-09!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.78e-07;11 | |||
|ontology_enrichment_disease=DOID:1036!5.02e-14!8;DOID:299!1.82e-12!25;DOID:8692!5.11e-08!31;DOID:1240!1.21e-07!39 | |ontology_enrichment_disease=DOID:1036!5.02e-14!8;DOID:299!1.82e-12!25;DOID:8692!5.11e-08!31;DOID:1240!1.21e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.72e-10;2!DOID:1036;6.06e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.72e-10,2;DOID:1036,6.94e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0008835!1.69e-11!22;UBERON:0003894!1.69e-11!22;UBERON:0009854!6.08e-11!23;UBERON:0003929!1.20e-10!54;UBERON:0002107!1.93e-10!19;UBERON:0006925!1.93e-10!19;UBERON:0008836!1.93e-10!19;UBERON:0001242!3.41e-10!4;UBERON:0001262!3.41e-10!4;UBERON:0004786!3.41e-10!4;UBERON:0004808!3.41e-10!4;UBERON:0001277!3.41e-10!4;UBERON:0007499!5.79e-10!25;UBERON:0009497!5.79e-10!25;UBERON:0000015!5.79e-10!25;UBERON:0002423!5.79e-10!25;UBERON:0006235!5.79e-10!25;UBERON:0004161!5.79e-10!25;UBERON:0009856!1.57e-09!26;UBERON:0004921!1.75e-08!129;UBERON:0004185!1.75e-08!129;UBERON:0003350!3.04e-08!5;UBERON:0002365!8.60e-08!31;UBERON:0002330!8.60e-08!31;UBERON:0005057!2.28e-07!26;UBERON:0005911!3.53e-07!82 | |ontology_enrichment_uberon=UBERON:0008835!1.69e-11!22;UBERON:0003894!1.69e-11!22;UBERON:0009854!6.08e-11!23;UBERON:0003929!1.20e-10!54;UBERON:0002107!1.93e-10!19;UBERON:0006925!1.93e-10!19;UBERON:0008836!1.93e-10!19;UBERON:0001242!3.41e-10!4;UBERON:0001262!3.41e-10!4;UBERON:0004786!3.41e-10!4;UBERON:0004808!3.41e-10!4;UBERON:0001277!3.41e-10!4;UBERON:0007499!5.79e-10!25;UBERON:0009497!5.79e-10!25;UBERON:0000015!5.79e-10!25;UBERON:0002423!5.79e-10!25;UBERON:0006235!5.79e-10!25;UBERON:0004161!5.79e-10!25;UBERON:0009856!1.57e-09!26;UBERON:0004921!1.75e-08!129;UBERON:0004185!1.75e-08!129;UBERON:0003350!3.04e-08!5;UBERON:0002365!8.60e-08!31;UBERON:0002330!8.60e-08!31;UBERON:0005057!2.28e-07!26;UBERON:0005911!3.53e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.28e-09;19!UBERON:0006925;3.28e-09;19!UBERON:0002423;3.92e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.06e-09,19;UBERON:0006925,3.06e-09,19;UBERON:0008836,3.06e-09,19;UBERON:0008835,4.66e-08,22;UBERON:0003894,4.66e-08,22;UBERON:0009854,9.89e-08,23;UBERON:0007499,3.72e-07,25;UBERON:0009497,3.72e-07,25;UBERON:0000015,3.72e-07,25;UBERON:0002423,3.72e-07,25;UBERON:0006235,3.72e-07,25;UBERON:0004161,3.72e-07,25;UBERON:0009856,6.70e-07,26 | |||
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| ||
|short_description=p4@ACSM3 | |short_description=p4@ACSM3 | ||
}} | }} |
Latest revision as of 02:30, 25 September 2015
Short description: | p4@ACSM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACSM3_5end |
Coexpression cluster: | C3542_signet_adenocarcinoma_chronic_liver_Hepatocyte_kidney_gastric |
Association with transcript: | -9bp_to_ENST00000289416, ENST00000440284, NM_005622, NM_202000, uc002dhq.2, uc002dhr.2_5end |
EntrezGene: | ACSM3 |
HGNC: | 10522 |
UniProt: | Q53FZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 3.06e-09 | 19 |
digestive gland | 3.06e-09 | 19 |
liver bud | 3.06e-09 | 19 |
hepatic diverticulum | 4.66e-08 | 22 |
liver primordium | 4.66e-08 | 22 |
digestive tract diverticulum | 9.89e-08 | 23 |
epithelial sac | 3.72e-07 | 25 |
epithelium of foregut-midgut junction | 3.72e-07 | 25 |
anatomical boundary | 3.72e-07 | 25 |
hepatobiliary system | 3.72e-07 | 25 |
foregut-midgut junction | 3.72e-07 | 25 |
septum transversum | 3.72e-07 | 25 |
sac | 6.70e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.72e-10 | 2 |
chronic leukemia | 6.94e-10 | 8 |