FFCP PHASE1:Hg19::chr22:44568825..44568837,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBI0 | |||
|association_with_transcript=0bp_to_ENST00000422871,NM_001137605,NM_001254742,NR_024427,uc010gzo.2,uc011aqe.1_5end | |||
|cluster_id=chr22:44568825..44568837,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_12_at_PARVG_5end | |||
|id=chr22:44568825..44568837,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.77e-48!65;CL:0002194!6.67e-48!63;CL:0000576!6.67e-48!63;CL:0000040!6.67e-48!63;CL:0000559!6.67e-48!63;CL:0000763!6.15e-47!112;CL:0000049!6.15e-47!112;CL:0000557!1.57e-45!71;CL:0000839!9.18e-42!70;CL:0000766!3.17e-39!76;CL:0002057!2.82e-32!42;CL:0000860!1.72e-29!45;CL:0000037!9.31e-29!172;CL:0000566!9.31e-29!172;CL:0002032!2.67e-27!165;CL:0000837!2.67e-27!165;CL:0000988!3.61e-26!182;CL:0002087!1.21e-23!119;CL:0000738!5.29e-20!140;CL:0002031!5.65e-20!124;CL:0002393!4.50e-09!9;CL:0002397!4.50e-09!9;CL:0002619!1.50e-07!3;CL:0000235!2.07e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.04e-39;6!CL:0002619;4.06e-21;3!CL:0000763;1.29e-11;100!CL:0002032;3.32e-08;1!CL:0000557;3.32e-08;1!CL:0000473;1.02e-07;39!CL:0000234;1.02e-07;39!CL:0000766;3.83e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.67e-39,6;CL:0000763,5.54e-30,108;CL:0000049,5.54e-30,108;CL:0002194,1.85e-21,59;CL:0000576,1.85e-21,59;CL:0000040,1.85e-21,59;CL:0000559,1.85e-21,59;CL:0000557,2.14e-21,67;CL:0002619,3.80e-21,3;CL:0002009,1.14e-20,61;CL:0000839,6.65e-19,66;CL:0002032,1.18e-18,161;CL:0000837,1.18e-18,161;CL:0000037,1.09e-17,168;CL:0000766,4.20e-17,72;CL:0000988,1.47e-16,177;CL:0002087,1.17e-09,115;CL:0002031,3.87e-09,120;CL:0000738,9.89e-08,136;CL:0000473,1.59e-07,48;CL:0000234,1.59e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000049;1.05e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!9.92e-13!31;DOID:1240!3.29e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.60e-22;31!DOID:1240;2.68e-16;39!DOID:2531;3.14e-08;51!DOID:0060083;3.14e-08;51!DOID:225;4.35e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.97e-23,31;DOID:1240,3.24e-18,39;DOID:2531,1.85e-13,51;DOID:0060083,1.85e-13,51;DOID:225,4.66e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.99e-39!80;UBERON:0001474!9.29e-37!86;UBERON:0002390!2.22e-36!102;UBERON:0003061!2.22e-36!102;UBERON:0002193!9.55e-32!112;UBERON:0004765!1.30e-30!101;UBERON:0001434!1.30e-30!101;UBERON:0002405!1.51e-26!115;UBERON:0002204!8.00e-14!167;UBERON:0003081!4.82e-12!216;UBERON:0007023!2.12e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.49e-07;1!UBERON:0006518;1.49e-07;1!UBERON:0008949;1.49e-07;1!UBERON:0000101;1.49e-07;1!UBERON:0002167;1.49e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-18,76;UBERON:0001474,6.06e-17,82;UBERON:0004765,3.60e-15,90;UBERON:0002405,1.39e-14,93;UBERON:0002390,1.10e-13,98;UBERON:0003061,1.10e-13,98;UBERON:0001434,2.38e-13,100;UBERON:0002193,3.92e-12,108;UBERON:0002171,1.44e-07,1;UBERON:0006518,1.44e-07,1;UBERON:0008949,1.44e-07,1;UBERON:0000101,1.44e-07,1;UBERON:0002167,1.44e-07,1;UBERON:0002204,9.13e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,7.61312612415743,11.3362783106643,5.40908692031792,0.290796477559129,0.755751887377619,0.242584061187816,0.232429036905685,0.822335776043652,0.929119112685311,0,0.768482119587302,0,0,0,0,0.752969358170419,1.09162460023138,1.12361742222542,0.612167784741805,0.962787081228281,0.639337125799041,0.329851300186716,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0.521482918420201,0.434377689410233,0,0,0.632924774881769,0.633765858935825,0.850417199860174,0.838634582033504,0.786300418025466,0.750884464207532,0.803627933485401,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.348259474598534,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17055712783534,2.34004265139238,2.37809859661965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9461402577071,4.52031382288914,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81012448902989,0.324621940274555,0.280797178113459,2.51058146936511,5.64047624782884,0,0.169291777801603,4.49646610290359,3.22879531505676,1.70338495076131,3.09154810280188,2.76516687877612,4.02616994206349,2.50273712567863,5.27547857585509,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,8.94226116468806,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.640724475406168,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0.628216385000937,0,0.122026264901963,0.250381861413,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2278947550129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0,0,0,0,0.603851374266694,0.0771741581079447,0,1.41095188908457,0,0,0.196308467114945,0.297046400327086,0,0,0.281951753939561,0.515663103788617,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p12@PARVG | |||
}} |
Latest revision as of 02:24, 25 September 2015
Short description: | p12@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PARVG_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000422871, NM_001137605, NM_001254742, NR_024427, uc010gzo.2, uc011aqe.1_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | Q9HBI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.67e-39 | 6 |
myeloid cell | 5.54e-30 | 108 |
common myeloid progenitor | 5.54e-30 | 108 |
monopoietic cell | 1.85e-21 | 59 |
monocyte | 1.85e-21 | 59 |
monoblast | 1.85e-21 | 59 |
promonocyte | 1.85e-21 | 59 |
granulocyte monocyte progenitor cell | 2.14e-21 | 67 |
adult endothelial progenitor cell | 3.80e-21 | 3 |
macrophage dendritic cell progenitor | 1.14e-20 | 61 |
myeloid lineage restricted progenitor cell | 6.65e-19 | 66 |
hematopoietic oligopotent progenitor cell | 1.18e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-18 | 161 |
hematopoietic stem cell | 1.09e-17 | 168 |
myeloid leukocyte | 4.20e-17 | 72 |
hematopoietic cell | 1.47e-16 | 177 |
nongranular leukocyte | 1.17e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.87e-09 | 120 |
leukocyte | 9.89e-08 | 136 |
defensive cell | 1.59e-07 | 48 |
phagocyte | 1.59e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-18 | 76 |
bone element | 6.06e-17 | 82 |
skeletal element | 3.60e-15 | 90 |
immune system | 1.39e-14 | 93 |
hematopoietic system | 1.10e-13 | 98 |
blood island | 1.10e-13 | 98 |
skeletal system | 2.38e-13 | 100 |
hemolymphoid system | 3.92e-12 | 108 |
lower lobe of right lung | 1.44e-07 | 1 |
right lung lobe | 1.44e-07 | 1 |
lower lobe of lung | 1.44e-07 | 1 |
lobe of lung | 1.44e-07 | 1 |
right lung | 1.44e-07 | 1 |
musculoskeletal system | 9.13e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.97e-23 | 31 |
leukemia | 3.24e-18 | 39 |
hematologic cancer | 1.85e-13 | 51 |
immune system cancer | 1.85e-13 | 51 |
syndrome | 4.66e-08 | 1 |