FFCP PHASE1:Hg19::chr19:10713112..10713198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57153 | |EntrezGene=57153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17292 | |HGNC=17292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWA5 | |UniProt=Q8IWA5 | ||
|association_with_transcript=0bp_to_ENST00000407327,NM_001145056,uc002mpe.3_5end | |association_with_transcript=0bp_to_ENST00000407327,NM_001145056,uc002mpe.3_5end | ||
|cluster_id=chr19:10713112..10713198,+ | |||
|description=CAGE_peak_1_at_SLC44A2_5end | |description=CAGE_peak_1_at_SLC44A2_5end | ||
|id=chr19:10713112..10713198,+ | |id=chr19:10713112..10713198,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.88e-09!35;CL:0002139!9.16e-09!24;CL:0000542!1.64e-08!53;CL:0000051!1.64e-08!53;CL:0000838!2.27e-08!52;CL:0000791!3.32e-08!18;CL:0000789!3.32e-08!18;CL:0002420!3.32e-08!18;CL:0002419!3.32e-08!18;CL:0000790!3.32e-08!18;CL:0000048!1.22e-07!430;CL:0000213!1.47e-07!57;CL:0000215!1.47e-07!57;CL:0000236!1.59e-07!14;CL:0000222!2.56e-07!119;CL:0002078!2.79e-07!44 | |ontology_enrichment_celltype=CL:0000115!3.88e-09!35;CL:0002139!9.16e-09!24;CL:0000542!1.64e-08!53;CL:0000051!1.64e-08!53;CL:0000838!2.27e-08!52;CL:0000791!3.32e-08!18;CL:0000789!3.32e-08!18;CL:0002420!3.32e-08!18;CL:0002419!3.32e-08!18;CL:0000790!3.32e-08!18;CL:0000048!1.22e-07!430;CL:0000213!1.47e-07!57;CL:0000215!1.47e-07!57;CL:0000236!1.59e-07!14;CL:0000222!2.56e-07!119;CL:0002078!2.79e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.56e-09;24!CL:0000791;3.33e-08;18!CL:0000789;3.33e-08;18!CL:0002419;3.33e-08;18!CL:0000115;5.15e-08;36!CL:0000236;2.20e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.34e-09,36;CL:0002139,9.15e-09,24;CL:0000542,1.64e-08,53;CL:0000051,1.64e-08,53;CL:0000838,2.27e-08,52;CL:0000791,3.32e-08,18;CL:0000789,3.32e-08,18;CL:0002420,3.32e-08,18;CL:0002419,3.32e-08,18;CL:0000790,3.32e-08,18;CL:0000213,6.17e-08,58;CL:0000215,6.17e-08,58;CL:0000048,7.22e-08,427;CL:0002078,1.11e-07,45;CL:0000236,1.59e-07,14;CL:0000222,1.78e-07,121;CL:0000723,6.46e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000790;3.33e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!3.61e-16!113;UBERON:0004535!1.01e-15!110;UBERON:0002049!3.84e-12!79;UBERON:0007798!3.84e-12!79;UBERON:0000055!3.84e-12!69;UBERON:0004872!7.55e-12!84;UBERON:0001981!9.48e-10!60;UBERON:0007500!9.48e-10!60;UBERON:0004537!9.48e-10!60;UBERON:0006965!9.48e-10!60;UBERON:0003081!1.31e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;2.58e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,7.11e-16,112;UBERON:0004535,1.98e-15,109;UBERON:0002049,7.38e-12,78;UBERON:0007798,7.38e-12,78;UBERON:0000055,7.50e-12,68;UBERON:0003081,1.20e-11,203;UBERON:0004872,1.43e-11,83;UBERON:0007500,1.80e-09,59;UBERON:0001981,1.80e-09,59;UBERON:0004537,1.80e-09,59;UBERON:0006965,1.80e-09,59 | |||
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| ||
|short_description=p1@SLC44A2 | |short_description=p1@SLC44A2 | ||
}} | }} |
Latest revision as of 02:20, 25 September 2015
Short description: | p1@SLC44A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC44A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407327, NM_001145056, uc002mpe.3_5end |
EntrezGene: | SLC44A2 |
HGNC: | 17292 |
UniProt: | Q8IWA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.34e-09 | 36 |
endothelial cell of vascular tree | 9.15e-09 | 24 |
lymphocyte | 1.64e-08 | 53 |
common lymphoid progenitor | 1.64e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.27e-08 | 52 |
mature alpha-beta T cell | 3.32e-08 | 18 |
alpha-beta T cell | 3.32e-08 | 18 |
immature T cell | 3.32e-08 | 18 |
mature T cell | 3.32e-08 | 18 |
immature alpha-beta T cell | 3.32e-08 | 18 |
lining cell | 6.17e-08 | 58 |
barrier cell | 6.17e-08 | 58 |
multi fate stem cell | 7.22e-08 | 427 |
meso-epithelial cell | 1.11e-07 | 45 |
B cell | 1.59e-07 | 14 |
mesodermal cell | 1.78e-07 | 121 |
somatic stem cell | 6.46e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 7.11e-16 | 112 |
cardiovascular system | 1.98e-15 | 109 |
vasculature | 7.38e-12 | 78 |
vascular system | 7.38e-12 | 78 |
vessel | 7.50e-12 | 68 |
lateral plate mesoderm | 1.20e-11 | 203 |
splanchnic layer of lateral plate mesoderm | 1.43e-11 | 83 |
epithelial tube open at both ends | 1.80e-09 | 59 |
blood vessel | 1.80e-09 | 59 |
blood vasculature | 1.80e-09 | 59 |
vascular cord | 1.80e-09 | 59 |