FFCP PHASE1:Hg19::chr7:107643674..107643685,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:107643674..107643685,-
|short_description=p3@LAMB1
|description=CAGE_peak_3_at_LAMB1_5end
|association_with_transcript=14bp_to_ENST00000222399_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3912 | |EntrezGene=3912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6486 | |HGNC=6486 | ||
|TSSclassifier=strong | |||
|UniProt=P07942 | |UniProt=P07942 | ||
|association_with_transcript=14bp_to_ENST00000222399_5end | |||
|cluster_id=chr7:107643674..107643685,- | |||
|description=CAGE_peak_3_at_LAMB1_5end | |||
|id=chr7:107643674..107643685,- | |||
|ontology_enrichment_celltype=CL:0000055!1.21e-20!180;CL:0000222!1.86e-17!119;CL:0000220!5.03e-17!246;CL:0002321!9.49e-17!248;CL:0000057!6.51e-12!75;CL:0000183!8.55e-12!59;CL:0000680!1.23e-11!57;CL:0000056!1.23e-11!57;CL:0000355!1.23e-11!57;CL:0000187!2.00e-11!54;CL:0000393!1.84e-09!60;CL:0000211!1.84e-09!60;CL:0000066!1.50e-08!254;CL:0000548!3.21e-08!679;CL:0000004!3.21e-08!679;CL:0000255!3.21e-08!679;CL:0000192!1.11e-07!42;CL:0000514!1.11e-07!42;CL:0000012!1.40e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.69e-07;55!CL:0002494;3.21e-07;16!CL:0002620;6.18e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.10e-18,121;CL:0002321,2.22e-14,250;CL:0000680,6.27e-13,58;CL:0000056,6.27e-13,58;CL:0000355,6.27e-13,58;CL:0000187,1.06e-12,55;CL:0000057,5.99e-11,76;CL:0000393,1.54e-09,61;CL:0000211,1.54e-09,61;CL:0000192,1.80e-08,43;CL:0000514,1.80e-08,43;CL:0002620,3.88e-07,23;CL:0002494,5.38e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;7.70e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:193;7.04e-07;29!DOID:120;7.77e-07;27 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.86e-17!143;UBERON:0002100!1.03e-16!216;UBERON:0003104!1.52e-16!238;UBERON:0009142!1.52e-16!238;UBERON:0003914!2.32e-16!118;UBERON:0000481!1.55e-15!347;UBERON:0000475!1.83e-14!365;UBERON:0000468!3.60e-14!659;UBERON:0000119!4.52e-14!312;UBERON:0000490!9.32e-14!138;UBERON:0000914!2.26e-13!83;UBERON:0002329!2.26e-13!83;UBERON:0003077!2.26e-13!83;UBERON:0003059!2.26e-13!83;UBERON:0007282!2.26e-13!83;UBERON:0009618!2.26e-13!83;UBERON:0007285!2.26e-13!83;UBERON:0000483!3.86e-13!309;UBERON:0004290!4.25e-13!70;UBERON:0004872!6.25e-13!84;UBERON:0002049!1.06e-12!79;UBERON:0007798!1.06e-12!79;UBERON:0001134!9.07e-12!61;UBERON:0002036!9.07e-12!61;UBERON:0003082!9.07e-12!61;UBERON:0000486!1.19e-11!82;UBERON:0002385!1.62e-11!63;UBERON:0001015!1.62e-11!63;UBERON:0000383!1.62e-11!63;UBERON:0000467!4.72e-11!625;UBERON:0001009!7.13e-11!113;UBERON:0000480!8.23e-11!626;UBERON:0004535!2.18e-10!110;UBERON:0000055!5.08e-10!69;UBERON:0003103!5.40e-09!69;UBERON:0000477!7.34e-09!286;UBERON:0000926!9.27e-09!448;UBERON:0004120!9.27e-09!448;UBERON:0006603!9.27e-09!448;UBERON:0001981!1.82e-08!60;UBERON:0007500!1.82e-08!60;UBERON:0004537!1.82e-08!60;UBERON:0006965!1.82e-08!60;UBERON:0002050!3.26e-08!605;UBERON:0005423!3.26e-08!605;UBERON:0000923!4.85e-08!604;UBERON:0005291!4.85e-08!604;UBERON:0006598!4.85e-08!604;UBERON:0002532!4.85e-08!604;UBERON:0000922!4.95e-08!612;UBERON:0007100!8.36e-08!27;UBERON:0004111!8.44e-08!241;UBERON:0003102!8.62e-08!95;UBERON:0000948!2.35e-07!24;UBERON:0005498!2.35e-07!24;UBERON:0004140!2.35e-07!24;UBERON:0009881!2.35e-07!24;UBERON:0004141!2.35e-07!24;UBERON:0003084!2.35e-07!24;UBERON:0007005!2.35e-07!24;UBERON:0004139!2.35e-07!24;UBERON:0004291!2.35e-07!24;UBERON:0000466!2.93e-07!126;UBERON:0001637!3.28e-07!42;UBERON:0003509!3.28e-07!42;UBERON:0004572!3.28e-07!42;UBERON:0002199!6.32e-07!45;UBERON:0002416!6.32e-07!45;UBERON:0001048!8.82e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.24e-08;25!UBERON:0000948;3.68e-07;22 | |||
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| ||
|short_description=p3@LAMB1 | |||
}} | }} |
Latest revision as of 02:18, 25 September 2015
Short description: | p3@LAMB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAMB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000222399_5end |
EntrezGene: | LAMB1 |
HGNC: | 6486 |
UniProt: | P07942 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.10e-18 | 121 |
embryonic cell | 2.22e-14 | 250 |
muscle precursor cell | 6.27e-13 | 58 |
myoblast | 6.27e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.27e-13 | 58 |
muscle cell | 1.06e-12 | 55 |
fibroblast | 5.99e-11 | 76 |
electrically responsive cell | 1.54e-09 | 61 |
electrically active cell | 1.54e-09 | 61 |
smooth muscle cell | 1.80e-08 | 43 |
smooth muscle myoblast | 1.80e-08 | 43 |
skin fibroblast | 3.88e-07 | 23 |
cardiocyte | 5.38e-07 | 16 |