FFCP PHASE1:Hg19::chr22:44482539..44482567,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14653 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000477795_5end | |||
|cluster_id=chr22:44482539..44482567,+ | |||
|description=CAGE_peak_14_at_PARVB_5end | |||
|id=chr22:44482539..44482567,+ | |||
|ontology_enrichment_celltype=CL:0000057!7.07e-09!75;CL:1000306!1.63e-08!4;CL:0002547!1.63e-08!4;CL:0000153!7.36e-08!9;CL:0000447!7.36e-08!9;CL:0000055!1.94e-07!180;CL:0000135!3.50e-07!3;CL:0000386!3.50e-07!3;CL:0000388!3.50e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.79e-11;3!CL:0000135;1.98e-11;3!CL:0000388;1.98e-11;3!CL:0000153;1.69e-08;9!CL:0000447;1.69e-08;9!CL:0002539;1.32e-07;10!CL:0000499;6.97e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.15e-11,3;CL:0000135,2.04e-11,3;CL:0000388,2.04e-11,3;CL:0000153,1.36e-08,9;CL:0000447,1.36e-08,9;CL:0002539,1.12e-07,10;CL:0000499,6.29e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!1.63e-08!4;UBERON:0007240!1.63e-08!4;UBERON:0005742!1.63e-08!4;UBERON:0005734!1.63e-08!4;UBERON:0004664!1.63e-08!4;UBERON:0004663!1.63e-08!4;UBERON:0000043!3.50e-07!3;UBERON:0007023!9.20e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.79e-11;3!UBERON:0007616;1.79e-11;3!UBERON:0002217;1.79e-11;3!UBERON:0002018;1.79e-11;3!UBERON:0007846;1.98e-11;3!UBERON:0000043;1.98e-11;3!UBERON:0007845;1.98e-11;3!UBERON:0005795;2.50e-09;1!UBERON:0007029;5.97e-09;1!UBERON:0004237;1.32e-07;10!UBERON:0004695;1.32e-07;10!UBERON:0002111;1.32e-07;10!UBERON:0004178;1.32e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.15e-11,3;UBERON:0007616,1.15e-11,3;UBERON:0002217,1.15e-11,3;UBERON:0002018,1.15e-11,3;UBERON:0007846,2.04e-11,3;UBERON:0000043,2.04e-11,3;UBERON:0007845,2.04e-11,3;UBERON:0007029,6.72e-09,1;UBERON:0004237,1.12e-07,10;UBERON:0004695,1.12e-07,10;UBERON:0002111,1.12e-07,10;UBERON:0004178,1.12e-07,10 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47745269692145,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,3.47631645505977,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,0.662045904066094,1.72101972449288,0.709336764396714,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0.612975591598039,1.05166641234618,0,0.179389635688862,0.213557388818567,0,1.80054657650641,0.721367704669072,1.28820270022815,0,0.168776332241266,0.974370051611986,0,0.184099797284599,0.80823028409406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84154367945675,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78907329578371,1.88887408098384,2.0911118104818,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,4.22215270595328,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.859930162358083,0,0,0,0,0,1.35588444468319,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.72924735609633,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,1.38348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,2.48194083552549,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.443511850813194,0,0,0,0.131545547125698,0,0,0.156986185701028,0,0,3.65263488203798,0,0,1.28657779517981,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84793052341245,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,1.48798007266701,3.23522940041993,0.865253124247578,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,1.70587185520785,0.714193294391221,0,0,0,0.0636471582781649,0,0.653150243690884,0.684466602170562,0.134704106029175,0.215166616178029,1.33064142618405,0,0,0,0,0,0.611207220914332,2.44137706989443,0,0,0 | |||
|short_description=p14@PARVB | |||
}} |
Latest revision as of 02:16, 25 September 2015
Short description: | p14@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PARVB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000477795_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.15e-11 | 3 |
fibrocyte | 2.04e-11 | 3 |
tendon cell | 2.04e-11 | 3 |
GAG secreting cell | 1.36e-08 | 9 |
carbohydrate secreting cell | 1.36e-08 | 9 |
aortic smooth muscle cell | 1.12e-07 | 10 |
stromal cell | 6.29e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.15e-11 | 3 |
layer of synovial tissue | 1.15e-11 | 3 |
synovial joint | 1.15e-11 | 3 |
synovial membrane of synovial joint | 1.15e-11 | 3 |
dense regular connective tissue | 2.04e-11 | 3 |
tendon | 2.04e-11 | 3 |
regular connective tissue | 2.04e-11 | 3 |
surface | 6.72e-09 | 1 |
blood vessel smooth muscle | 1.12e-07 | 10 |
arterial system smooth muscle | 1.12e-07 | 10 |
artery smooth muscle tissue | 1.12e-07 | 10 |
aorta smooth muscle tissue | 1.12e-07 | 10 |