FFCP PHASE1:Hg19::chrX:41449223..41449229,-: Difference between revisions
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|id=chrX:41449223..41449229,-
|short_description=p20@CASK
|description=CAGE_peak_20_at_CASK_5end
|association_with_transcript=-19bp_to_ENST00000378179,uc004dfj.3_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8573 | |EntrezGene=8573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1497 | |HGNC=1497 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000378179,uc004dfj.3_5end | |||
|cluster_id=chrX:41449223..41449229,- | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_20_at_CASK_5end | |||
|id=chrX:41449223..41449229,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002569;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,1.44e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.42e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;5.56e-11;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,5.70e-11,20 | |||
|ontology_enrichment_uberon=UBERON:0002426!1.45e-11!1;UBERON:0003831!1.45e-11!1;UBERON:0003898!1.45e-11!1;UBERON:0004830!1.45e-11!1;UBERON:0001774!1.45e-11!1;UBERON:0003830!1.45e-11!1;UBERON:0005175!1.45e-11!1;UBERON:0003897!1.45e-11!1;UBERON:0001103!1.45e-11!1;UBERON:0010084!1.45e-11!1;UBERON:0003112!2.68e-11!1;UBERON:0000032!2.68e-11!1;UBERON:0005253!2.68e-11!1;UBERON:0003128!2.68e-11!1;UBERON:0002241!2.68e-11!1;UBERON:0001703!2.68e-11!1;UBERON:0004761!2.68e-11!1;UBERON:0009617!2.68e-11!1;UBERON:0002363!5.43e-11!1;UBERON:0007647!5.43e-11!1;UBERON:0010115!5.43e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.98e-21;10!UBERON:0003422;1.50e-09;6!UBERON:0000478;2.61e-09;24!UBERON:0003104;2.26e-08;7!UBERON:0009142;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.54e-21,10;UBERON:0000358,8.54e-21,10;UBERON:0000307,8.54e-21,10;UBERON:0000091,8.54e-21,10;UBERON:0000087,8.54e-21,10;UBERON:0007010,8.54e-21,10;UBERON:0007806,8.54e-21,10;UBERON:0008780,8.54e-21,10;UBERON:0005728,8.54e-21,10;UBERON:0003422,1.44e-09,6;UBERON:0000478,2.56e-09,24 | |||
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|short_description=p20@CASK | |||
}} | }} |
Latest revision as of 02:13, 25 September 2015
Short description: | p20@CASK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_CASK_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -19bp_to_ENST00000378179, uc004dfj.3_5end |
EntrezGene: | CASK |
HGNC: | 1497 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.54e-21 | 10 |
blastocyst | 8.54e-21 | 10 |
blastula | 8.54e-21 | 10 |
bilaminar disc | 8.54e-21 | 10 |
inner cell mass | 8.54e-21 | 10 |
cleaving embryo | 8.54e-21 | 10 |
connecting stalk | 8.54e-21 | 10 |
inner cell mass derived epiblast | 8.54e-21 | 10 |
extraembryonic mesoderm | 8.54e-21 | 10 |
mesenchyme of umbilical cord | 1.44e-09 | 6 |
extraembryonic structure | 2.56e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 5.70e-11 | 20 |