FFCP PHASE1:Hg19::chr11:110300622..110300692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2230 | |EntrezGene=2230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3638 | |HGNC=3638 | ||
|TSSclassifier=strong | |||
|UniProt=P10109 | |UniProt=P10109 | ||
|association_with_transcript=0bp_to_NM_004109_5end | |association_with_transcript=0bp_to_NM_004109_5end | ||
|cluster_id=chr11:110300622..110300692,+ | |||
|description=CAGE_peak_1_at_FDX1_5end | |description=CAGE_peak_1_at_FDX1_5end | ||
|id=chr11:110300622..110300692,+ | |id=chr11:110300622..110300692,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.82e-15!42;CL:0000860!1.47e-13!45;CL:0000557!5.16e-13!71;CL:0002009!4.67e-11!65;CL:0002194!1.67e-10!63;CL:0000576!1.67e-10!63;CL:0000040!1.67e-10!63;CL:0000559!1.67e-10!63;CL:0000839!1.72e-10!70;CL:0002031!1.22e-08!124;CL:0000766!1.35e-08!76;CL:0002087!1.29e-07!119 | |ontology_enrichment_celltype=CL:0002057!1.82e-15!42;CL:0000860!1.47e-13!45;CL:0000557!5.16e-13!71;CL:0002009!4.67e-11!65;CL:0002194!1.67e-10!63;CL:0000576!1.67e-10!63;CL:0000040!1.67e-10!63;CL:0000559!1.67e-10!63;CL:0000839!1.72e-10!70;CL:0002031!1.22e-08!124;CL:0000766!1.35e-08!76;CL:0002087!1.29e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.85e-11;39!CL:0000234;2.85e-11;39!CL:0000860;2.19e-10;33!CL:0002057;2.19e-10;33!CL:0000576;1.34e-07;48!CL:0000766;6.33e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.40e-18,48;CL:0000234,1.40e-18,48;CL:0000860,1.82e-15,42;CL:0002057,1.82e-15,42;CL:0000557,4.84e-15,67;CL:0002009,5.64e-13,61;CL:0002194,2.16e-12,59;CL:0000576,2.16e-12,59;CL:0000040,2.16e-12,59;CL:0000559,2.16e-12,59;CL:0000839,3.04e-12,66;CL:0000766,4.97e-10,72;CL:0002031,1.07e-09,120;CL:0002087,1.32e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.41e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.07e-14!80;UBERON:0001474!1.45e-13!86;UBERON:0004765!1.51e-12!101;UBERON:0001434!1.51e-12!101;UBERON:0000926!4.52e-11!448;UBERON:0004120!4.52e-11!448;UBERON:0006603!4.52e-11!448;UBERON:0002405!1.04e-10!115;UBERON:0000062!1.09e-10!511;UBERON:0002204!4.56e-08!167;UBERON:0002390!3.63e-07!102;UBERON:0003061!3.63e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.88e-16,76;UBERON:0001474,2.15e-15,82;UBERON:0004765,9.43e-15,90;UBERON:0001434,5.20e-14,100;UBERON:0002405,3.33e-12,93;UBERON:0002204,3.60e-09,167;UBERON:0002390,3.29e-08,98;UBERON:0003061,3.29e-08,98;UBERON:0002193,2.97e-07,108;UBERON:0004119,8.04e-07,160;UBERON:0000925,8.04e-07,160;UBERON:0006595,8.04e-07,160 | |||
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| ||
|short_description=p1@FDX1 | |short_description=p1@FDX1 | ||
}} | }} |
Latest revision as of 01:52, 25 September 2015
Short description: | p1@FDX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FDX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_004109_5end |
EntrezGene: | FDX1 |
HGNC: | 3638 |
UniProt: | P10109 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.40e-18 | 48 |
phagocyte | 1.40e-18 | 48 |
classical monocyte | 1.82e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-15 | 42 |
granulocyte monocyte progenitor cell | 4.84e-15 | 67 |
macrophage dendritic cell progenitor | 5.64e-13 | 61 |
monopoietic cell | 2.16e-12 | 59 |
monocyte | 2.16e-12 | 59 |
monoblast | 2.16e-12 | 59 |
promonocyte | 2.16e-12 | 59 |
myeloid lineage restricted progenitor cell | 3.04e-12 | 66 |
myeloid leukocyte | 4.97e-10 | 72 |
hematopoietic lineage restricted progenitor cell | 1.07e-09 | 120 |
nongranular leukocyte | 1.32e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.88e-16 | 76 |
bone element | 2.15e-15 | 82 |
skeletal element | 9.43e-15 | 90 |
skeletal system | 5.20e-14 | 100 |
immune system | 3.33e-12 | 93 |
musculoskeletal system | 3.60e-09 | 167 |
hematopoietic system | 3.29e-08 | 98 |
blood island | 3.29e-08 | 98 |
hemolymphoid system | 2.97e-07 | 108 |
endoderm-derived structure | 8.04e-07 | 160 |
endoderm | 8.04e-07 | 160 |
presumptive endoderm | 8.04e-07 | 160 |