FFCP PHASE1:Hg19::chr19:926055..926068,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:926055..926068,+ to FFCP PHASE1:Hg19::chr19:926055..926068,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1820 | |EntrezGene=1820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3031 | |HGNC=3031 | ||
|TSSclassifier=strong | |||
|UniProt=Q99856 | |UniProt=Q99856 | ||
|association_with_transcript=18bp_to_ENST00000263620,NM_005224,uc002lql.2_5end | |||
|cluster_id=chr19:926055..926068,+ | |||
|description=CAGE_peak_2_at_ARID3A_5end | |||
|id=chr19:926055..926068,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.29e-25!112;CL:0000049!2.29e-25!112;CL:0002320!1.59e-20!365;CL:0000134!7.05e-20!358;CL:0000766!4.14e-19!76;CL:0000988!2.30e-18!182;CL:0000034!2.85e-18!444;CL:0002194!7.78e-18!63;CL:0000576!7.78e-18!63;CL:0000040!7.78e-18!63;CL:0000559!7.78e-18!63;CL:0000048!8.01e-18!430;CL:0002009!1.60e-17!65;CL:0000037!2.22e-17!172;CL:0000566!2.22e-17!172;CL:0000219!7.03e-17!390;CL:0000723!1.13e-16!436;CL:0000557!2.51e-16!71;CL:0002032!4.48e-16!165;CL:0000837!4.48e-16!165;CL:0000839!9.11e-15!70;CL:0000144!5.26e-14!625;CL:0002057!7.71e-14!42;CL:0002371!9.86e-14!591;CL:0000860!1.53e-12!45;CL:0000738!6.07e-12!140;CL:0002087!5.47e-09!119;CL:0000012!5.83e-09!682;CL:0000548!1.56e-08!679;CL:0000004!1.56e-08!679;CL:0000255!1.56e-08!679;CL:0002031!3.10e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000576;9.83e-12;48!CL:0000473;2.11e-10;39!CL:0000234;2.11e-10;39!CL:0000860;4.31e-10;33!CL:0002057;4.31e-10;33!CL:0000766;7.73e-10;69!CL:0000763;5.53e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.19e-28,108;CL:0000049,3.19e-28,108;CL:0002320,1.15e-22,361;CL:0000134,2.97e-22,354;CL:0000766,3.26e-22,72;CL:0000988,4.74e-22,177;CL:0002194,6.19e-21,59;CL:0000576,6.19e-21,59;CL:0000040,6.19e-21,59;CL:0000559,6.19e-21,59;CL:0000034,8.27e-21,441;CL:0000048,2.50e-20,427;CL:0002009,3.13e-20,61;CL:0000037,3.76e-20,168;CL:0000723,4.66e-19,433;CL:0000557,9.16e-19,67;CL:0002032,1.11e-18,161;CL:0000837,1.11e-18,161;CL:0000219,1.40e-18,386;CL:0000839,2.01e-17,66;CL:0000473,1.34e-16,48;CL:0000234,1.34e-16,48;CL:0000860,5.72e-15,42;CL:0002057,5.72e-15,42;CL:0000738,2.54e-14,136;CL:0002087,4.43e-11,115;CL:0002031,6.38e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-11;42!CL:0000049;2.59e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!1.86e-08!31;DOID:1240!2.12e-08!39;DOID:2531!3.62e-07!51;DOID:0060083!3.62e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.62e-08;31!DOID:1240;5.97e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.63e-08,31;DOID:1240,2.92e-08,39;DOID:2531,2.51e-07,51;DOID:0060083,2.51e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.96e-20!375;UBERON:0002390!5.91e-17!102;UBERON:0003061!5.91e-17!102;UBERON:0002193!1.77e-14!112;UBERON:0002371!5.69e-14!80;UBERON:0001474!2.53e-13!86;UBERON:0003081!2.58e-13!216;UBERON:0002405!2.02e-12!115;UBERON:0004765!1.59e-11!101;UBERON:0001434!1.59e-11!101;UBERON:0005631!1.39e-08!14;UBERON:0000158!1.39e-08!14;UBERON:0002204!2.56e-08!167;UBERON:0000478!1.95e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.72e-09;24!UBERON:0005631;4.30e-07;10!UBERON:0000158;4.30e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.56e-22,371;UBERON:0002390,1.52e-19,98;UBERON:0003061,1.52e-19,98;UBERON:0002193,4.96e-17,108;UBERON:0002371,2.46e-16,76;UBERON:0001474,9.09e-16,82;UBERON:0004765,1.29e-13,90;UBERON:0002405,3.24e-13,93;UBERON:0001434,9.69e-13,100;UBERON:0003081,1.70e-12,203;UBERON:0005631,2.51e-09,14;UBERON:0000158,2.51e-09,14;UBERON:0000478,4.83e-09,24;UBERON:0002204,8.13e-09,167;UBERON:0000926,4.77e-08,315;UBERON:0004120,4.77e-08,315;UBERON:0006603,4.77e-08,315 | |||
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| ||
|short_description=p2@ARID3A | |||
}} | }} |
Latest revision as of 01:51, 25 September 2015
Short description: | p2@ARID3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARID3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000263620, NM_005224, uc002lql.2_5end |
EntrezGene: | ARID3A |
HGNC: | 3031 |
UniProt: | Q99856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.19e-28 | 108 |
common myeloid progenitor | 3.19e-28 | 108 |
connective tissue cell | 1.15e-22 | 361 |
mesenchymal cell | 2.97e-22 | 354 |
myeloid leukocyte | 3.26e-22 | 72 |
hematopoietic cell | 4.74e-22 | 177 |
monopoietic cell | 6.19e-21 | 59 |
monocyte | 6.19e-21 | 59 |
monoblast | 6.19e-21 | 59 |
promonocyte | 6.19e-21 | 59 |
stem cell | 8.27e-21 | 441 |
multi fate stem cell | 2.50e-20 | 427 |
macrophage dendritic cell progenitor | 3.13e-20 | 61 |
hematopoietic stem cell | 3.76e-20 | 168 |
somatic stem cell | 4.66e-19 | 433 |
granulocyte monocyte progenitor cell | 9.16e-19 | 67 |
hematopoietic oligopotent progenitor cell | 1.11e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.11e-18 | 161 |
motile cell | 1.40e-18 | 386 |
myeloid lineage restricted progenitor cell | 2.01e-17 | 66 |
defensive cell | 1.34e-16 | 48 |
phagocyte | 1.34e-16 | 48 |
classical monocyte | 5.72e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.72e-15 | 42 |
leukocyte | 2.54e-14 | 136 |
nongranular leukocyte | 4.43e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 6.38e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.56e-22 | 371 |
hematopoietic system | 1.52e-19 | 98 |
blood island | 1.52e-19 | 98 |
hemolymphoid system | 4.96e-17 | 108 |
bone marrow | 2.46e-16 | 76 |
bone element | 9.09e-16 | 82 |
skeletal element | 1.29e-13 | 90 |
immune system | 3.24e-13 | 93 |
skeletal system | 9.69e-13 | 100 |
lateral plate mesoderm | 1.70e-12 | 203 |
extraembryonic membrane | 2.51e-09 | 14 |
membranous layer | 2.51e-09 | 14 |
extraembryonic structure | 4.83e-09 | 24 |
musculoskeletal system | 8.13e-09 | 167 |
mesoderm | 4.77e-08 | 315 |
mesoderm-derived structure | 4.77e-08 | 315 |
presumptive mesoderm | 4.77e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.63e-08 | 31 |
leukemia | 2.92e-08 | 39 |
hematologic cancer | 2.51e-07 | 51 |
immune system cancer | 2.51e-07 | 51 |