FFCP PHASE1:Hg19::chr3:139108446..139108457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9276 | |EntrezGene=9276 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2232 | |HGNC=2232 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCL6 | |UniProt=D6RCL6 | ||
|association_with_transcript=10bp_to_ENST00000512242_5end | |association_with_transcript=10bp_to_ENST00000512242_5end | ||
|cluster_id=chr3:139108446..139108457,- | |||
|coexpression_cluster_id=C2721 | |||
|description=CAGE_peak_3_at_COPB2_5end | |description=CAGE_peak_3_at_COPB2_5end | ||
|id=chr3:139108446..139108457,- | |id=chr3:139108446..139108457,- | ||
|ontology_enrichment_celltype=CL:0000548!6.85e-32!679;CL:0000004!6.85e-32!679;CL:0000255!6.85e-32!679;CL:0000012!1.05e-31!682;CL:0000144!1.29e-24!625;CL:0000055!1.53e-22!180;CL:0002371!5.47e-19!591;CL:0000003!1.28e-17!722;CL:0002321!8.03e-16!248;CL:0000220!9.90e-16!246;CL:0000222!3.82e-15!119;CL:0000680!1.09e-13!57;CL:0000056!1.09e-13!57;CL:0000355!1.09e-13!57;CL:0000048!1.40e-13!430;CL:0000034!2.44e-13!444;CL:0000057!2.63e-13!75;CL:0000723!3.80e-13!436;CL:0000359!8.52e-13!32;CL:0000187!1.51e-12!54;CL:0000192!3.38e-12!42;CL:0000514!3.38e-12!42;CL:0000393!5.40e-12!60;CL:0000211!5.40e-12!60;CL:0000063!1.70e-10!578;CL:0000183!5.06e-10!59;CL:0002334!1.90e-07!12;CL:0002620!5.99e-07!23 | |ontology_enrichment_celltype=CL:0000548!6.85e-32!679;CL:0000004!6.85e-32!679;CL:0000255!6.85e-32!679;CL:0000012!1.05e-31!682;CL:0000144!1.29e-24!625;CL:0000055!1.53e-22!180;CL:0002371!5.47e-19!591;CL:0000003!1.28e-17!722;CL:0002321!8.03e-16!248;CL:0000220!9.90e-16!246;CL:0000222!3.82e-15!119;CL:0000680!1.09e-13!57;CL:0000056!1.09e-13!57;CL:0000355!1.09e-13!57;CL:0000048!1.40e-13!430;CL:0000034!2.44e-13!444;CL:0000057!2.63e-13!75;CL:0000723!3.80e-13!436;CL:0000359!8.52e-13!32;CL:0000187!1.51e-12!54;CL:0000192!3.38e-12!42;CL:0000514!3.38e-12!42;CL:0000393!5.40e-12!60;CL:0000211!5.40e-12!60;CL:0000063!1.70e-10!578;CL:0000183!5.06e-10!59;CL:0002334!1.90e-07!12;CL:0002620!5.99e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.75e-12;32!CL:0000192;9.02e-09;43!CL:0002334;1.33e-07;12!CL:0002620;6.34e-07;23!CL:0000187;6.48e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.37e-16,250;CL:0000222,3.40e-15,121;CL:0000057,7.80e-14,76;CL:0000048,9.30e-14,427;CL:0000680,1.17e-13,58;CL:0000056,1.17e-13,58;CL:0000355,1.17e-13,58;CL:0000034,1.68e-13,441;CL:0000723,2.61e-13,433;CL:0000359,6.15e-13,32;CL:0000187,1.65e-12,55;CL:0000192,5.57e-12,43;CL:0000514,5.57e-12,43;CL:0000393,5.61e-12,61;CL:0000211,5.61e-12,61;CL:0002334,1.60e-07,12;CL:0002620,5.12e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;9.02e-09;43!CL:0000355;5.91e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!4.66e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.40e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.97e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.22e-14!42;UBERON:0003509!1.22e-14!42;UBERON:0004572!1.22e-14!42;UBERON:0002049!1.13e-13!79;UBERON:0007798!1.13e-13!79;UBERON:0000490!2.97e-13!138;UBERON:0000914!3.29e-13!83;UBERON:0002329!3.29e-13!83;UBERON:0003077!3.29e-13!83;UBERON:0003059!3.29e-13!83;UBERON:0007282!3.29e-13!83;UBERON:0009618!3.29e-13!83;UBERON:0007285!3.29e-13!83;UBERON:0004872!1.56e-12!84;UBERON:0000055!3.82e-12!69;UBERON:0001981!3.83e-12!60;UBERON:0007500!3.83e-12!60;UBERON:0004537!3.83e-12!60;UBERON:0006965!3.83e-12!60;UBERON:0004573!7.95e-12!33;UBERON:0004571!7.95e-12!33;UBERON:0004290!5.93e-11!70;UBERON:0004535!1.05e-10!110;UBERON:0001134!1.32e-10!61;UBERON:0002036!1.32e-10!61;UBERON:0003082!1.32e-10!61;UBERON:0002385!6.74e-10!63;UBERON:0001015!6.74e-10!63;UBERON:0000383!6.74e-10!63;UBERON:0001009!1.43e-09!113;UBERON:0000486!2.13e-09!82;UBERON:0003914!3.10e-09!118;UBERON:0005256!5.87e-09!143;UBERON:0000926!1.09e-07!448;UBERON:0004120!1.09e-07!448;UBERON:0006603!1.09e-07!448;UBERON:0000947!6.83e-07!21;UBERON:0010191!6.83e-07!21;UBERON:0002100!6.91e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.33e-11;42!UBERON:0003509;8.33e-11;42!UBERON:0004572;8.33e-11;42!UBERON:0004573;2.01e-10;33!UBERON:0004571;2.01e-10;33!UBERON:0007500;6.04e-08;56!UBERON:0001981;6.04e-08;56!UBERON:0004537;6.04e-08;56!UBERON:0002049;1.74e-07;75!UBERON:0007798;1.74e-07;75!UBERON:0000055;7.86e-07;65 | |||
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| ||
|short_description=p3@COPB2 | |short_description=p3@COPB2 | ||
}} | }} |
Latest revision as of 01:46, 25 September 2015
Short description: | p3@COPB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COPB2_5end |
Coexpression cluster: | C2721_Preadipocyte_Smooth_Mast_Fibroblast_Mesenchymal_mesenchymal_Myoblast |
Association with transcript: | 10bp_to_ENST00000512242_5end |
EntrezGene: | COPB2 |
HGNC: | 2232 |
UniProt: | D6RCL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.37e-16 | 250 |
mesodermal cell | 3.40e-15 | 121 |
fibroblast | 7.80e-14 | 76 |
multi fate stem cell | 9.30e-14 | 427 |
muscle precursor cell | 1.17e-13 | 58 |
myoblast | 1.17e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-13 | 58 |
stem cell | 1.68e-13 | 441 |
somatic stem cell | 2.61e-13 | 433 |
vascular associated smooth muscle cell | 6.15e-13 | 32 |
muscle cell | 1.65e-12 | 55 |
smooth muscle cell | 5.57e-12 | 43 |
smooth muscle myoblast | 5.57e-12 | 43 |
electrically responsive cell | 5.61e-12 | 61 |
electrically active cell | 5.61e-12 | 61 |
preadipocyte | 1.60e-07 | 12 |
skin fibroblast | 5.12e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.97e-07 | 14 |