FFCP PHASE1:Hg19::chr12:81331647..81331658,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17787 | |||
|TSSclassifier=strong | |||
|UniProt=O14910 | |||
|association_with_transcript=35bp_to_NM_004664,uc001szj.1,uc001szk.1_5end | |||
|cluster_id=chr12:81331647..81331658,- | |||
|coexpression_cluster_id=C2244 | |||
|description=CAGE_peak_6_at_LIN7A_5end | |||
|id=chr12:81331647..81331658,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.71e-23;3!UBERON:0006601;5.55e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.25e-09;1!DOID:4549;6.25e-09;1!DOID:5861;6.25e-09;1!DOID:6496;6.25e-09;1!DOID:0050619;7.26e-09;1!DOID:1357;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.03e-09,1;DOID:4549,6.03e-09,1;DOID:5861,6.03e-09,1;DOID:6496,6.03e-09,1;DOID:0050619,7.01e-09,1;DOID:1357,7.01e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002616!6.67e-40!59;UBERON:0001049!7.64e-40!57;UBERON:0005068!7.64e-40!57;UBERON:0006241!7.64e-40!57;UBERON:0007135!7.64e-40!57;UBERON:0002780!3.32e-34!41;UBERON:0001890!3.32e-34!41;UBERON:0006240!3.32e-34!41;UBERON:0000955!1.93e-33!69;UBERON:0006238!1.93e-33!69;UBERON:0003080!3.77e-33!42;UBERON:0000073!4.17e-33!94;UBERON:0001016!4.17e-33!94;UBERON:0001017!2.53e-32!82;UBERON:0005743!1.23e-31!86;UBERON:0007023!1.05e-30!115;UBERON:0002346!1.19e-28!90;UBERON:0003075!1.91e-27!86;UBERON:0007284!1.91e-27!86;UBERON:0002020!5.79e-27!34;UBERON:0003528!5.79e-27!34;UBERON:0001869!1.29e-26!32;UBERON:0001893!1.30e-24!34;UBERON:0003056!5.69e-24!61;UBERON:0001950!1.83e-23!20;UBERON:0002619!2.36e-23!22;UBERON:0002791!2.70e-23!33;UBERON:0000956!6.20e-20!25;UBERON:0000203!6.20e-20!25;UBERON:0000033!1.03e-19!123;UBERON:0000153!4.07e-18!129;UBERON:0007811!4.07e-18!129;UBERON:0000924!2.01e-16!173;UBERON:0006601!2.01e-16!173;UBERON:0004121!2.05e-15!169;UBERON:0001894!7.35e-12!7;UBERON:0006222!7.35e-12!7;UBERON:0000025!5.77e-11!194;UBERON:0000200!7.35e-11!6;UBERON:0002021!6.29e-09!5;UBERON:0002420!9.05e-09!9;UBERON:0007245!9.05e-09!9;UBERON:0010009!9.05e-09!9;UBERON:0010011!9.05e-09!9;UBERON:0000454!9.05e-09!9;UBERON:0002308!1.86e-08!9;UBERON:0000125!1.86e-08!9;UBERON:0004733!2.09e-08!12;UBERON:0002028!2.09e-08!12;UBERON:0007277!2.09e-08!12;UBERON:0003296!3.62e-08!4;UBERON:0010133!3.62e-08!4;UBERON:0001871!4.15e-08!7;UBERON:0003076!4.57e-08!15;UBERON:0003057!4.57e-08!15;UBERON:0004111!5.41e-08!241;UBERON:0000477!8.35e-08!286;UBERON:0004732!1.27e-07!13;UBERON:0002680!5.63e-07!9;UBERON:0001895!5.63e-07!9;UBERON:0010092!5.63e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.33e-29;4!UBERON:0010133;5.33e-29;4!UBERON:0001950;4.40e-26;20!UBERON:0000073;3.22e-24;53!UBERON:0002616;3.22e-24;53!UBERON:0002619;1.06e-23;22!UBERON:0002780;2.07e-21;41!UBERON:0001890;2.07e-21;41!UBERON:0000956;8.24e-21;25!UBERON:0000203;8.24e-21;25!UBERON:0003528;1.51e-19;34!UBERON:0002020;1.51e-19;34!UBERON:0000200;4.56e-19;6!UBERON:0000955;2.61e-18;68!UBERON:0002791;6.10e-18;32!UBERON:0001869;6.10e-18;32!UBERON:0001893;9.88e-17;34!UBERON:0001894;1.10e-16;7!UBERON:0001871;1.40e-16;6!UBERON:0001905;1.12e-15;2!UBERON:0002757;1.12e-15;2!UBERON:0010134;1.12e-15;2!UBERON:0005408;1.12e-15;2!UBERON:0001899;1.12e-15;2!UBERON:0001017;1.19e-15;75!UBERON:0001876;1.73e-15;2!UBERON:0002771;3.98e-15;2!UBERON:0000007;3.98e-15;2!UBERON:0002702;3.98e-15;2!UBERON:0002680;3.42e-13;9!UBERON:0001895;3.42e-13;9!UBERON:0001016;2.18e-12;83!UBERON:0002037;1.19e-11;6!UBERON:0001870;2.16e-10;3!UBERON:0004733;6.24e-10;12!UBERON:0002028;6.24e-10;12!UBERON:0007023;1.23e-09;114!UBERON:0004732;3.55e-09;13!UBERON:0001764;7.26e-09;1!UBERON:0001825;7.26e-09;1!UBERON:0002784;2.79e-08;4!UBERON:0002420;9.79e-08;9!UBERON:0007245;9.79e-08;9!UBERON:0010009;9.79e-08;9!UBERON:0010011;9.79e-08;9!UBERON:0000454;9.79e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-39,53;UBERON:0002616,1.20e-39,53;UBERON:0001049,2.20e-37,56;UBERON:0005068,2.20e-37,56;UBERON:0006241,2.20e-37,56;UBERON:0007135,2.20e-37,56;UBERON:0000955,2.38e-33,68;UBERON:0006238,2.38e-33,68;UBERON:0002780,8.60e-31,41;UBERON:0001890,8.60e-31,41;UBERON:0003080,8.60e-31,41;UBERON:0006240,8.60e-31,41;UBERON:0001017,8.96e-31,81;UBERON:0003296,7.99e-29,4;UBERON:0010133,7.99e-29,4;UBERON:0001016,2.13e-27,89;UBERON:0001950,1.82e-26,20;UBERON:0002346,4.09e-26,86;UBERON:0003075,1.32e-24,82;UBERON:0007284,1.32e-24,82;UBERON:0002619,4.76e-24,22;UBERON:0007023,8.08e-24,114;UBERON:0003528,6.75e-23,34;UBERON:0002020,6.75e-23,34;UBERON:0000956,4.07e-21,25;UBERON:0000203,4.07e-21,25;UBERON:0002791,3.88e-20,32;UBERON:0001869,3.88e-20,32;UBERON:0003056,5.17e-20,61;UBERON:0000200,1.77e-19,6;UBERON:0001893,6.81e-19,34;UBERON:0010371,9.94e-19,104;UBERON:0001871,8.45e-17,6;UBERON:0001894,1.38e-16,7;UBERON:0006222,1.38e-16,7;UBERON:0001876,8.66e-16,2;UBERON:0002702,1.16e-15,2;UBERON:0001905,2.08e-15,2;UBERON:0002757,2.08e-15,2;UBERON:0010134,2.08e-15,2;UBERON:0005408,2.08e-15,2;UBERON:0001899,2.08e-15,2;UBERON:0002771,3.22e-15,2;UBERON:0000007,3.22e-15,2;UBERON:0004121,3.28e-14,171;UBERON:0000924,3.28e-14,171;UBERON:0006601,3.28e-14,171;UBERON:0010314,4.67e-14,132;UBERON:0002680,3.77e-13,9;UBERON:0001895,3.77e-13,9;UBERON:0010092,3.77e-13,9;UBERON:0002037,1.40e-11,6;UBERON:0006215,1.40e-11,6;UBERON:0011216,3.52e-11,223;UBERON:0001870,9.56e-11,3;UBERON:0004733,6.71e-10,12;UBERON:0002028,6.71e-10,12;UBERON:0007277,6.71e-10,12;UBERON:0000025,8.59e-10,192;UBERON:0004732,3.79e-09,13;UBERON:0001764,7.01e-09,1;UBERON:0001825,7.01e-09,1;UBERON:0002784,3.80e-08,4;UBERON:0004111,4.31e-08,240;UBERON:0003076,6.09e-08,15;UBERON:0003057,6.09e-08,15;UBERON:0002420,8.33e-08,9;UBERON:0007245,8.33e-08,9;UBERON:0010009,8.33e-08,9;UBERON:0010011,8.33e-08,9;UBERON:0000454,8.33e-08,9;UBERON:0000349,7.94e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,2.98244294329889,1.82870241333667,0,0,0,0,0,0.755798243562828,0,0.861593638227486,0,0,0,0,0,0,0,0,1.11321717794222,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,1.20596438625408,3.05163472634166,4.20201187738654,1.18219047581419,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,4.32455020788351,0.677942222341597,0,0,0.949661939338181,0,0,0,0,0,0.458146384663663,0.686379991447858,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0.0787831823072236,0.412079291905832,0.404421263125109,0.295282444544246,0.254019996197353,0,0.272406812223151,0,0.137539436597234,0,0,0,0.242998226632099,0,0.157611414598396,0,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0.293104467356165,0,0.387848869084652,1.3223260174269,0.171086837884329,0,0,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0.306345576763462,0,3.76929831000562,1.77213635993397,1.58634144372552,1.8778639605975,0,0.554645257684261,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,1.24432592536558,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0.511577485214607,0.431299245586727,0.314531883711793,0.109209638192014,0,0.425149840203366,0,0,0,0,0.80057074828547,0,0,0.578063025868136,2.8339315265117,1.11743701340006,0.82046545696302,0.252071696221718,0.553258019713743,0.968853873791107,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.742913430802341,0.781078098613847,1.65349437200947,0.317079050969534,0,0,0,1.05522746615772,0,1.07140367175657,11.7699302776588,1.21393120847326,1.59363533945908,0,0.230467975111559,0,0.747667062745149,0.263091094251396,0,0,0,0.471346769748006,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1294608203896,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0,0.588925401344836,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,1.28823786971007,2.14371304124943,0.829169439458779,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@LIN7A | |||
}} |
Latest revision as of 01:43, 25 September 2015
Short description: | p6@LIN7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LIN7A_5end |
Coexpression cluster: | C2244_extraskeletal_maxillary_pineal_cerebellum_small_Neutrophils_occipital |
Association with transcript: | 35bp_to_NM_004664, uc001szj.1, uc001szk.1_5end |
EntrezGene: | LIN7A |
HGNC: | 17787 |
UniProt: | O14910 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.03e-09 | 1 |
extraosseous chondrosarcoma | 6.03e-09 | 1 |
myxoid chondrosarcoma | 6.03e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 6.03e-09 | 1 |
paranasal sinus cancer | 7.01e-09 | 1 |
maxillary sinus cancer | 7.01e-09 | 1 |