FFCP PHASE1:Hg19::chr20:30347712..30347751,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22974 | |EntrezGene=22974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1249 | |HGNC=1249 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULW0 | |UniProt=Q9ULW0 | ||
|association_with_transcript=-124bp_to_AF244547_5end | |association_with_transcript=-124bp_to_AF244547_5end | ||
|cluster_id=chr20:30347712..30347751,+ | |||
|coexpression_cluster_id=C3623 | |||
|description=CAGE_peak_5_at_TPX2_5end | |description=CAGE_peak_5_at_TPX2_5end | ||
|id=chr20:30347712..30347751,+ | |id=chr20:30347712..30347751,+ | ||
|ontology_enrichment_celltype=CL:0002494!5.33e-25!16;CL:0000359!3.61e-16!32;CL:0000192!1.46e-15!42;CL:0000514!1.46e-15!42;CL:0002548!4.23e-15!6;CL:0000187!6.92e-15!54;CL:0000680!6.99e-14!57;CL:0000056!6.99e-14!57;CL:0000355!6.99e-14!57;CL:0000183!2.86e-13!59;CL:0000393!5.57e-13!60;CL:0000211!5.57e-13!60;CL:0002590!6.68e-11!3;CL:0000055!4.61e-09!180;CL:1000306!1.29e-08!4;CL:0002547!1.29e-08!4;CL:0000569!2.21e-08!4;CL:0000011!2.21e-08!4 | |ontology_enrichment_celltype=CL:0002494!5.33e-25!16;CL:0000359!3.61e-16!32;CL:0000192!1.46e-15!42;CL:0000514!1.46e-15!42;CL:0002548!4.23e-15!6;CL:0000187!6.92e-15!54;CL:0000680!6.99e-14!57;CL:0000056!6.99e-14!57;CL:0000355!6.99e-14!57;CL:0000183!2.86e-13!59;CL:0000393!5.57e-13!60;CL:0000211!5.57e-13!60;CL:0002590!6.68e-11!3;CL:0000055!4.61e-09!180;CL:1000306!1.29e-08!4;CL:0002547!1.29e-08!4;CL:0000569!2.21e-08!4;CL:0000011!2.21e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002494;1.93e-19;16!CL:0002548;4.10e-19;6!CL:0002592;7.09e-18;3!CL:0000228;1.33e-13;1!CL:0002557;1.33e-13;1!CL:0002372;1.33e-13;1!CL:0000359;3.96e-09;32!CL:0002589;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.26e-19,16;CL:0002548,5.26e-19,6;CL:0002592,7.09e-18,3;CL:0002557,8.58e-14,1;CL:0000228,1.42e-13,1;CL:0002372,1.42e-13,1;CL:0000359,8.98e-10,32;CL:0000187,7.45e-08,55;CL:0002589,1.05e-07,2;CL:0000680,1.99e-07,58;CL:0000056,1.99e-07,58;CL:0000355,1.99e-07,58;CL:0000192,3.02e-07,43;CL:0000514,3.02e-07,43;CL:0000393,4.81e-07,61;CL:0000211,4.81e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.06e-20!110;UBERON:0001009!4.26e-19!113;UBERON:0000948!4.59e-19!24;UBERON:0005498!4.59e-19!24;UBERON:0004140!4.59e-19!24;UBERON:0009881!4.59e-19!24;UBERON:0004141!4.59e-19!24;UBERON:0003084!4.59e-19!24;UBERON:0007005!4.59e-19!24;UBERON:0004139!4.59e-19!24;UBERON:0004291!4.59e-19!24;UBERON:0004872!1.56e-18!84;UBERON:0007100!1.23e-16!27;UBERON:0001637!5.73e-16!42;UBERON:0003509!5.73e-16!42;UBERON:0004572!5.73e-16!42;UBERON:0003914!6.61e-14!118;UBERON:0001134!1.06e-12!61;UBERON:0002036!1.06e-12!61;UBERON:0003082!1.06e-12!61;UBERON:0002385!3.63e-12!63;UBERON:0001015!3.63e-12!63;UBERON:0000383!3.63e-12!63;UBERON:0002049!1.31e-11!79;UBERON:0007798!1.31e-11!79;UBERON:0004573!4.47e-11!33;UBERON:0004571!4.47e-11!33;UBERON:0005284!5.23e-11!5;UBERON:0004290!1.52e-10!70;UBERON:0001981!4.30e-10!60;UBERON:0007500!4.30e-10!60;UBERON:0004537!4.30e-10!60;UBERON:0006965!4.30e-10!60;UBERON:0000415!1.29e-08!4;UBERON:0007240!1.29e-08!4;UBERON:0005742!1.29e-08!4;UBERON:0005734!1.29e-08!4;UBERON:0004664!1.29e-08!4;UBERON:0004663!1.29e-08!4;UBERON:0000486!2.01e-08!82;UBERON:0000055!2.51e-08!69;UBERON:0000914!2.82e-08!83;UBERON:0002329!2.82e-08!83;UBERON:0003077!2.82e-08!83;UBERON:0003059!2.82e-08!83;UBERON:0007282!2.82e-08!83;UBERON:0009618!2.82e-08!83;UBERON:0007285!2.82e-08!83;UBERON:0000490!9.68e-08!138;UBERON:0003498!1.79e-07!5;UBERON:0005985!1.79e-07!5;UBERON:0003081!2.17e-07!216;UBERON:0000926!2.96e-07!448;UBERON:0004120!2.96e-07!448;UBERON:0006603!2.96e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;7.09e-18;3!UBERON:0005985;7.09e-18;3!UBERON:0001621;7.09e-18;3!UBERON:0000948;3.84e-14;22!UBERON:0007195;6.65e-14;1!UBERON:0007100;1.92e-12;25!UBERON:0001637;2.66e-11;42!UBERON:0003509;2.66e-11;42!UBERON:0004572;2.66e-11;42!UBERON:0001529;1.05e-07;2!UBERON:0007204;1.05e-07;2!UBERON:0000078;1.93e-07;2!UBERON:0002012;1.93e-07;2!UBERON:0008886;1.93e-07;2!UBERON:0000473;2.37e-07;8!UBERON:0004573;7.56e-07;33!UBERON:0004571;7.56e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003498,2.99e-23,5;UBERON:0005985,2.99e-23,5;UBERON:0000948,2.59e-18,24;UBERON:0005498,2.59e-18,24;UBERON:0004140,2.59e-18,24;UBERON:0009881,2.59e-18,24;UBERON:0004141,2.59e-18,24;UBERON:0003084,2.59e-18,24;UBERON:0007005,2.59e-18,24;UBERON:0004139,2.59e-18,24;UBERON:0004291,2.59e-18,24;UBERON:0001621,7.09e-18,3;UBERON:0007100,2.99e-16,27;UBERON:0001637,5.07e-14,42;UBERON:0003509,5.07e-14,42;UBERON:0004572,5.07e-14,42;UBERON:0007195,6.65e-14,1;UBERON:0004872,8.89e-14,83;UBERON:0004535,3.35e-10,109;UBERON:0001009,6.79e-10,112;UBERON:0007500,8.17e-10,59;UBERON:0001981,8.17e-10,59;UBERON:0004537,8.17e-10,59;UBERON:0006965,8.17e-10,59;UBERON:0004573,1.63e-09,33;UBERON:0004571,1.63e-09,33;UBERON:0003914,2.03e-09,117;UBERON:0000055,1.96e-08,68;UBERON:0001529,1.05e-07,2;UBERON:0007204,1.05e-07,2;UBERON:0000078,1.54e-07,2;UBERON:0007497,1.54e-07,2;UBERON:0003643,1.54e-07,2;UBERON:0003504,1.54e-07,2;UBERON:0003469,1.54e-07,2;UBERON:0003496,1.54e-07,2;UBERON:0002012,1.54e-07,2;UBERON:0008886,1.54e-07,2;UBERON:0007303,1.54e-07,2;UBERON:0002061,1.54e-07,2;UBERON:0005432,1.54e-07,2;UBERON:0004363,1.54e-07,2;UBERON:0000473,2.37e-07,8;UBERON:0002049,2.85e-07,78;UBERON:0007798,2.85e-07,78;UBERON:0003081,3.12e-07,203;UBERON:0000926,4.61e-07,315;UBERON:0004120,4.61e-07,315;UBERON:0006603,4.61e-07,315;UBERON:0001134,6.34e-07,62;UBERON:0002036,6.34e-07,62;UBERON:0003082,6.34e-07,62 | |||
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| ||
|short_description=p5@TPX2 | |short_description=p5@TPX2 | ||
}} | }} |
Latest revision as of 01:25, 25 September 2015
Short description: | p5@TPX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TPX2_5end |
Coexpression cluster: | C3623_testis_Smooth_Fibroblast_bone_Melanocyte_Myoblast_Multipotent |
Association with transcript: | -124bp_to_AF244547_5end |
EntrezGene: | TPX2 |
HGNC: | 1249 |
UniProt: | Q9ULW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.26e-19 | 16 |
cardiac fibroblast | 5.26e-19 | 6 |
smooth muscle cell of the coronary artery | 7.09e-18 | 3 |
fibroblast of pulmonary artery | 8.58e-14 | 1 |
multinucleate cell | 1.42e-13 | 1 |
myotube | 1.42e-13 | 1 |
vascular associated smooth muscle cell | 8.98e-10 | 32 |
muscle cell | 7.45e-08 | 55 |
smooth muscle cell of the brachiocephalic vasculature | 1.05e-07 | 2 |
muscle precursor cell | 1.99e-07 | 58 |
myoblast | 1.99e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.99e-07 | 58 |
smooth muscle cell | 3.02e-07 | 43 |
smooth muscle myoblast | 3.02e-07 | 43 |
electrically responsive cell | 4.81e-07 | 61 |
electrically active cell | 4.81e-07 | 61 |