FFCP PHASE1:Hg19::chr22:43398442..43398488,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:43398442..43398488,- to FFCP PHASE1:Hg19::chr22:43398442..43398488,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11252 | |EntrezGene=11252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8571 | |HGNC=8571 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYG7 | |UniProt=B0QYG7 | ||
|association_with_transcript=0bp_to_ENST00000422336_5end | |||
|cluster_id=chr22:43398442..43398488,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_4_at_PACSIN2_5end | |||
|id=chr22:43398442..43398488,- | |||
|ontology_enrichment_celltype=CL:0000048!8.76e-12!430;CL:0000723!2.45e-11!436;CL:0000034!5.09e-11!444;CL:0000077!1.87e-09!19;CL:0000057!2.73e-08!75;CL:0000134!3.30e-08!358;CL:0000055!5.16e-08!180;CL:0000144!6.48e-08!625;CL:0000219!9.44e-08!390;CL:0002320!1.56e-07!365;CL:0000192!1.92e-07!42;CL:0000514!1.92e-07!42;CL:0000163!7.37e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000163;5.34e-16;9!CL:0000097;1.10e-12;5!CL:0000077;8.78e-12;19!CL:0002594;3.62e-08;4!CL:0000174;3.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000163,6.41e-16,9;CL:0000097,1.12e-12,5;CL:0002028,1.12e-12,5;CL:0000077,8.03e-12,19;CL:0002594,2.00e-08,4;CL:0000174,3.62e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.75e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.85e-10;14!DOID:8692;6.33e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.78e-10,14;DOID:8692,2.85e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0004535!7.51e-10!110;UBERON:0001009!1.77e-09!113;UBERON:0000178!3.61e-08!15;UBERON:0000179!3.61e-08!15;UBERON:0000463!3.61e-08!15;UBERON:0002384!7.70e-08!375;UBERON:0003081!2.56e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.19e-14;15!UBERON:0000179;3.19e-14;15!UBERON:0000463;3.19e-14;15!UBERON:0001310;3.62e-08;4!UBERON:0002118;4.22e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.05e-14,15;UBERON:0000179,3.05e-14,15;UBERON:0000463,3.05e-14,15;UBERON:0001310,2.00e-08,4;UBERON:0002118,4.36e-07,5 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0.631719873426831,0,2.45733936501509,1.39560233594486,0.436882744260345,0,0.123766352960047,0,0.672325146451775,1.20538905604795,0,1.46379839637152,0.246242116153576,0.408001382488506,0,0,0,0,0.0764134057479513,0.164201178899891,0,0.786728553697808,1.53531759238885,0.619264493264304,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0.755751887377619,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,2.00538822393312,0,0,0,0.640456598628376,1.56071217071854,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0.267440195783507,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,10.3855165969499,13.059730297445,7.71156171009418,0,0,0,0,0,0.694281003215189,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.886413581652058,3.44263870114369,2.0078563452417,0.709336764396714,1.68203280042692,0,0.24666754841716,0,0,0.326923806226917,0.605429710579726,0,0.234321431833797,0,0,0.149448680551801,0,0.485618833104395,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0.247266929278557,5.46096817162816,3.59309070908119,0.168336113954066,0.125118519871964,0,0.877955241761676,0.919463387397059,0.150238058906597,1.36118619792025,0.717558542755448,0.213557388818567,0.423863802319124,1.20036438433761,0.309157587715317,0.257640540045629,0.558350568994769,0.843881661206331,0.779496041289589,0.504867548488229,0,0.323292113637624,1.77504796258307,1.10827308050404,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.6462960453256,0,0,0,0,0,0.122988438543114,0.343135620597051,0,1.1240175325762,0,0,0.325808305310325,0,1.44331342025273,0.115930404975077,0.469634776943287,0,0,0,0,0,0.246217006087397,0.468008530278475,0.297262324577456,0,0,0,0,0,0,21.1845192295256,30.2006128665365,22.1841083628626,13.6913955746113,29.7932142886257,0.190493682876507,1.52795370223311,0,0,0,0,0,0.112131084345361,0.43596006883328,0.36669142910475,1.29271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0.714889968290738,0,1.64648067356154,0.325736184293735,0.710783897485092,1.58390374586686,6.02878754119172,3.48613383440118,4.1988656296464,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.672510863961164,0,0,0,0,1.30139853857622,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0.35142424497814,0,0,0,0,0.184369168541703,0.347534457872331,0,0,1.44737618286021,0.647142602455851,0.426910231213777,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.462629081407967,0.532685175939381,0.164254312027618,0.519254429183621,0.464841513839837,0,0,0,1.26295892981067,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0.541892875087706,0,0,0,0,0.219259876645935,0.784306353074702,0.256450125116389,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,2.0911118104818,0,0.532306030317022,0,0.37064843820784,0.858749320451947,0,0.316379424718726,0.571890581771475,0,0,0.636406495851874,0.78494864019923,0.179872457583315,0.54907405947211,0.235624804691373,2.22400729730648,0,0.842516912477962,0.48763373908959,0,0,0.409499734223957,1.97967604735198,1.13008116620243,0.551365343546124,0,0,0,0,1.82619339266434,1.239293992399,2.25356482025793,1.14729081763241,0.491245205065606,1.78335525740625,0.354761064070598,0.422215270595328,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,24.8649328523763,25.2330278356984,23.3555346741407,9.52927101831156,8.22724546172388,22.6965658917451,17.8210374288578,21.4143797599453,0,0,0,0,0,0,0,0,0.191505370132367,10.3720055534703,0,4.21195767170188,0,0,0,0,0,0.403599414382095,0.851692475380653,1.03051603426729,0.307240764308458,1.3420566473545,0.834245708559542,3.71237381263877,1.67043704337145,0,10.5477714605633,0.33307196799782,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,1.11308705022906,0.494411622680279,0,0,0.552567831062295,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,2.04628948090749,0,9.57932369387759,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0.569710279235006,0,0,0,1.27600463892768,0.366390373607449,0,0,1.2558420511602,1.82832850090172,0.451191321234361,0.19606253431774,0.839107934879214,0.948768663620925,4.4502242114506,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0.123563938946503,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.34823682632161,0.174726668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| ||
|short_description=p4@PACSIN2 | |||
}} | }} |
Latest revision as of 01:13, 25 September 2015
Short description: | p4@PACSIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PACSIN2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000422336_5end |
EntrezGene: | PACSIN2 |
HGNC: | 8571 |
UniProt: | B0QYG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endocrine cell | 6.41e-16 | 9 |
mast cell | 1.12e-12 | 5 |
basophil mast progenitor cell | 1.12e-12 | 5 |
mesothelial cell | 8.03e-12 | 19 |
smooth muscle cell of the umbilical artery | 2.00e-08 | 4 |
steroid hormone secreting cell | 3.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.05e-14 | 15 |
haemolymphatic fluid | 3.05e-14 | 15 |
organism substance | 3.05e-14 | 15 |
umbilical artery | 2.00e-08 | 4 |
right ovary | 4.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.78e-10 | 14 |
myeloid leukemia | 2.85e-07 | 31 |