FFCP PHASE1:Hg19::chr6:137113489..137113569,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:137113489..137113569,- to FFCP PHASE1:Hg19::chr6:137113489..137113569,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4217 | |EntrezGene=4217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6857 | |HGNC=6857 | ||
|TSSclassifier=strong | |||
|UniProt=Q99683 | |UniProt=Q99683 | ||
|association_with_transcript=86bp_to_ENST00000359015,ENST00000367768,NM_005923,uc003qhc.2,uc010kgw.1_5end | |||
|cluster_id=chr6:137113489..137113569,- | |||
|coexpression_cluster_id=C468 | |||
|description=CAGE_peak_1_at_MAP3K5_5end | |||
|id=chr6:137113489..137113569,- | |||
|ontology_enrichment_celltype=CL:0000037!2.37e-20!172;CL:0000566!2.37e-20!172;CL:0002032!1.29e-19!165;CL:0000837!1.29e-19!165;CL:0000766!1.45e-18!76;CL:0000738!3.07e-18!140;CL:0002087!5.37e-18!119;CL:0000763!2.32e-17!112;CL:0000049!2.32e-17!112;CL:0000988!6.67e-17!182;CL:0002031!1.86e-16!124;CL:0002057!2.40e-16!42;CL:0002009!4.36e-16!65;CL:0002194!4.95e-16!63;CL:0000576!4.95e-16!63;CL:0000040!4.95e-16!63;CL:0000559!4.95e-16!63;CL:0000860!2.63e-15!45;CL:0000557!4.84e-15!71;CL:0000839!9.07e-15!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-11;33!CL:0002057;1.35e-11;33!CL:0000576;3.92e-11;48!CL:0000473;1.70e-10;39!CL:0000234;1.70e-10;39!CL:0000766;6.95e-09;69!CL:0000763;6.19e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.19e-21,168;CL:0002032,2.14e-20,161;CL:0000837,2.14e-20,161;CL:0000766,1.03e-19,72;CL:0002087,3.25e-19,115;CL:0000738,3.44e-19,136;CL:0000763,4.87e-18,108;CL:0000049,4.87e-18,108;CL:0000988,9.17e-18,177;CL:0002009,1.74e-17,61;CL:0002194,1.84e-17,59;CL:0000576,1.84e-17,59;CL:0000040,1.84e-17,59;CL:0000559,1.84e-17,59;CL:0002031,2.39e-17,120;CL:0000473,4.98e-17,48;CL:0000234,4.98e-17,48;CL:0000860,1.40e-16,42;CL:0002057,1.40e-16,42;CL:0000557,5.21e-16,67;CL:0000839,9.93e-16,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.91e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.48e-41!115;UBERON:0002390!5.76e-19!102;UBERON:0003061!5.76e-19!102;UBERON:0002193!2.66e-17!112;UBERON:0001049!1.06e-15!57;UBERON:0005068!1.06e-15!57;UBERON:0006241!1.06e-15!57;UBERON:0007135!1.06e-15!57;UBERON:0002371!1.25e-13!80;UBERON:0002616!8.95e-13!59;UBERON:0003080!1.04e-11!42;UBERON:0002405!1.17e-11!115;UBERON:0002780!2.28e-11!41;UBERON:0001890!2.28e-11!41;UBERON:0006240!2.28e-11!41;UBERON:0001474!7.40e-11!86;UBERON:0000955!3.40e-10!69;UBERON:0006238!3.40e-10!69;UBERON:0004765!2.55e-09!101;UBERON:0001434!2.55e-09!101;UBERON:0003075!2.92e-09!86;UBERON:0007284!2.92e-09!86;UBERON:0002020!1.20e-08!34;UBERON:0003528!1.20e-08!34;UBERON:0002346!1.84e-08!90;UBERON:0001893!2.36e-08!34;UBERON:0002791!4.50e-08!33;UBERON:0001017!5.33e-08!82;UBERON:0001869!1.04e-07!32;UBERON:0005743!2.20e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.15e-11;114!UBERON:0002780;1.86e-08;41!UBERON:0001890;1.86e-08;41!UBERON:0000073;2.09e-08;53!UBERON:0002616;2.09e-08;53!UBERON:0003528;3.05e-07;34!UBERON:0002020;3.05e-07;34!UBERON:0001893;4.33e-07;34!UBERON:0002791;5.97e-07;32!UBERON:0001869;7.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.72e-41,114;UBERON:0002390,7.71e-20,98;UBERON:0003061,7.71e-20,98;UBERON:0002193,6.48e-18,108;UBERON:0001049,2.19e-15,56;UBERON:0005068,2.19e-15,56;UBERON:0006241,2.19e-15,56;UBERON:0007135,2.19e-15,56;UBERON:0002371,1.58e-14,76;UBERON:0000073,2.20e-14,53;UBERON:0002616,2.20e-14,53;UBERON:0002405,9.86e-14,93;UBERON:0001474,1.04e-11,82;UBERON:0002780,2.38e-11,41;UBERON:0001890,2.38e-11,41;UBERON:0003080,2.38e-11,41;UBERON:0006240,2.38e-11,41;UBERON:0004765,8.91e-11,90;UBERON:0001434,3.67e-10,100;UBERON:0003075,1.23e-09,82;UBERON:0007284,1.23e-09,82;UBERON:0000955,1.59e-09,68;UBERON:0006238,1.59e-09,68;UBERON:0002346,1.20e-08,86;UBERON:0003528,1.35e-08,34;UBERON:0002020,1.35e-08,34;UBERON:0001893,2.66e-08,34;UBERON:0001017,1.15e-07,81;UBERON:0002791,1.18e-07,32;UBERON:0001869,1.19e-07,32 | |||
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| ||
|short_description=p1@MAP3K5 | |||
}} | }} |
Latest revision as of 01:13, 25 September 2015
Short description: | p1@MAP3K5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAP3K5_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 86bp_to_ENST00000359015, ENST00000367768, NM_005923, uc003qhc.2, uc010kgw.1_5end |
EntrezGene: | MAP3K5 |
HGNC: | 6857 |
UniProt: | Q99683 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.19e-21 | 168 |
hematopoietic oligopotent progenitor cell | 2.14e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-20 | 161 |
myeloid leukocyte | 1.03e-19 | 72 |
nongranular leukocyte | 3.25e-19 | 115 |
leukocyte | 3.44e-19 | 136 |
myeloid cell | 4.87e-18 | 108 |
common myeloid progenitor | 4.87e-18 | 108 |
hematopoietic cell | 9.17e-18 | 177 |
macrophage dendritic cell progenitor | 1.74e-17 | 61 |
monopoietic cell | 1.84e-17 | 59 |
monocyte | 1.84e-17 | 59 |
monoblast | 1.84e-17 | 59 |
promonocyte | 1.84e-17 | 59 |
hematopoietic lineage restricted progenitor cell | 2.39e-17 | 120 |
defensive cell | 4.98e-17 | 48 |
phagocyte | 4.98e-17 | 48 |
classical monocyte | 1.40e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-16 | 42 |
granulocyte monocyte progenitor cell | 5.21e-16 | 67 |
myeloid lineage restricted progenitor cell | 9.93e-16 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.72e-41 | 114 |
hematopoietic system | 7.71e-20 | 98 |
blood island | 7.71e-20 | 98 |
hemolymphoid system | 6.48e-18 | 108 |
neural tube | 2.19e-15 | 56 |
neural rod | 2.19e-15 | 56 |
future spinal cord | 2.19e-15 | 56 |
neural keel | 2.19e-15 | 56 |
bone marrow | 1.58e-14 | 76 |
regional part of nervous system | 2.20e-14 | 53 |
regional part of brain | 2.20e-14 | 53 |
immune system | 9.86e-14 | 93 |
bone element | 1.04e-11 | 82 |
regional part of forebrain | 2.38e-11 | 41 |
forebrain | 2.38e-11 | 41 |
anterior neural tube | 2.38e-11 | 41 |
future forebrain | 2.38e-11 | 41 |
skeletal element | 8.91e-11 | 90 |
skeletal system | 3.67e-10 | 100 |
neural plate | 1.23e-09 | 82 |
presumptive neural plate | 1.23e-09 | 82 |
brain | 1.59e-09 | 68 |
future brain | 1.59e-09 | 68 |
neurectoderm | 1.20e-08 | 86 |
brain grey matter | 1.35e-08 | 34 |
gray matter | 1.35e-08 | 34 |
telencephalon | 2.66e-08 | 34 |
central nervous system | 1.15e-07 | 81 |
regional part of telencephalon | 1.18e-07 | 32 |
cerebral hemisphere | 1.19e-07 | 32 |