FFCP PHASE1:Hg19::chr12:8034651..8034657,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:8034651..8034657,+ | |||
|coexpression_cluster_id=C1178 | |||
|description=CAGE_peak_2_at_NANOGP1_5end | |||
|id=chr12:8034651..8034657,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.41e-12!7;CL:0000586!2.41e-12!7;CL:0002150!8.68e-08!3;CL:0000861!8.68e-08!3;CL:0002322!2.77e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.26e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.88e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.20e-18;10!UBERON:0005564;3.20e-18;10!UBERON:0004161;1.27e-09;11!UBERON:0003104;7.41e-09;31!UBERON:0009497;3.19e-08;13 | |||
|ontology_enrichment_disease=DOID:162!7.43e-27!235;DOID:14566!6.11e-26!239;DOID:2531!4.40e-19!51;DOID:0060083!4.40e-19!51;DOID:305!8.81e-17!106;DOID:0050686!5.32e-14!137;DOID:0050687!1.12e-13!143;DOID:1240!1.08e-12!39;DOID:0060058!4.92e-10!10;DOID:3095!2.67e-09!22;DOID:2994!2.67e-09!22;DOID:8692!3.43e-08!31;DOID:1036!4.11e-07!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.52e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.86e-11!8;UBERON:0003135!2.37e-10!11;UBERON:0003101!3.28e-07!22;UBERON:0000079!3.28e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.34e-13;8!UBERON:0003135;7.29e-10;11!UBERON:0000991;8.48e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.39e-13,8;UBERON:0003135,7.40e-10,11;UBERON:0000991,8.75e-09,21;UBERON:0009196,8.75e-09,21;UBERON:0009117,8.75e-09,21;UBERON:0005564,8.75e-09,21;UBERON:0004176,2.15e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0.504641701751257,3.28479623168247,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.355709216742071,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,2.40453741329035,0,0,0,0,0.556812347790485,1.23087398947712,0.540911356951966,0.33307196799782,0,0.37428108081644,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0.217294743844016,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.335643173951685,0,3.01979500062719,0,0,1.13082457147153,0,0,0,0,6.8199859596543,0.123563938946503,0,0,0,0,0,0.782658475728359,0,0,0,0,0,82.6778806779709,0.518440956986236,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0.967563312890852,1.09633975629278,0.164230914106418,0,0,0,0,0.19871461170299,0,0,0.320635281006135,0,0.19980960958213,0,0.458146384663663,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,3.38767683921062,3.04938676010316,2.76354529802158,0,0.592713324460491,0,0,0.482259445395058,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0.365377795142688,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.294450700845729,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,2.27099564703142,58.6756121445045,0.760191006068622,0.815910637935854,0.534434810531121,0.827054095813604,48.8879701620131,4.31938579843965,9.37874455546625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@NANOGP1 | |||
}} |
Latest revision as of 00:57, 25 September 2015
Short description: | p2@NANOGP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NANOGP1_5end |
Coexpression cluster: | C1178_embryonic_testicular_teratocarcinoma_lymphangiectasia_epithelioid_bronchioalveolar_testis |
Association with transcript: | NA |
EntrezGene: | NANOGP1 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.88e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
testis | 2.39e-13 | 8 |
male reproductive organ | 7.40e-10 | 11 |
gonad | 8.75e-09 | 21 |
indifferent external genitalia | 8.75e-09 | 21 |
indifferent gonad | 8.75e-09 | 21 |
gonad primordium | 8.75e-09 | 21 |
external genitalia | 2.15e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.52e-07 | 106 |