FFCP PHASE1:Hg19::chr17:43299157..43299174,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:43299157..43299174,+
|short_description=p2@FMNL1
|description=CAGE_peak_2_at_FMNL1_5end
|association_with_transcript=-117bp_to_ENST00000328118,ENST0000033...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=752 | |EntrezGene=752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1212 | |HGNC=1212 | ||
|TSSclassifier=strong | |||
|UniProt=O95466 | |UniProt=O95466 | ||
|association_with_transcript=-117bp_to_ENST00000328118,ENST00000331495,NM_005892,uc002iin.2_5end | |||
|cluster_id=chr17:43299157..43299174,+ | |||
|description=CAGE_peak_2_at_FMNL1_5end | |||
|id=chr17:43299157..43299174,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.94e-68!140;CL:0000037!2.78e-67!172;CL:0000566!2.78e-67!172;CL:0002032!1.15e-63!165;CL:0000837!1.15e-63!165;CL:0000988!1.30e-63!182;CL:0002087!1.59e-55!119;CL:0002031!2.20e-53!124;CL:0000763!4.74e-38!112;CL:0000049!4.74e-38!112;CL:0000766!2.26e-36!76;CL:0000557!1.20e-32!71;CL:0002009!3.02e-31!65;CL:0002194!5.34e-30!63;CL:0000576!5.34e-30!63;CL:0000040!5.34e-30!63;CL:0000559!5.34e-30!63;CL:0000839!7.65e-29!70;CL:0000860!1.04e-27!45;CL:0002057!3.23e-27!42;CL:0000542!4.48e-22!53;CL:0000051!4.48e-22!53;CL:0000838!1.56e-21!52;CL:0000084!1.29e-12!25;CL:0000827!1.29e-12!25;CL:0000134!3.33e-10!358;CL:0000791!6.13e-09!18;CL:0000789!6.13e-09!18;CL:0002420!6.13e-09!18;CL:0002419!6.13e-09!18;CL:0000790!6.13e-09!18;CL:0002320!6.91e-09!365;CL:0000945!8.40e-09!24;CL:0000826!8.40e-09!24;CL:0000451!2.70e-07!10;CL:0000219!4.46e-07!390;CL:0000094!7.11e-07!8;CL:0000990!8.49e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-27;33!CL:0002057;1.01e-27;33!CL:0000473;6.99e-26;39!CL:0000234;6.99e-26;39!CL:0000576;2.24e-21;48!CL:0000766;3.30e-19;69!CL:0002087;7.31e-19;104!CL:0000738;7.17e-18;136!CL:0000084;1.52e-16;25!CL:0000542;1.81e-16;53!CL:0000988;4.66e-13;177!CL:0000763;2.21e-12;100!CL:0000791;1.71e-11;18!CL:0000789;1.71e-11;18!CL:0002419;1.71e-11;18!CL:0000945;4.70e-10;24!CL:0000094;8.80e-09;8!CL:0000990;1.18e-08;8!CL:0000451;2.67e-08;10!CL:0000219;5.95e-08;193!CL:0000081;3.92e-07;11!CL:0000625;4.54e-07;11!CL:0000236;5.84e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.11e-86,136;CL:0000037,1.80e-83,168;CL:0000988,6.63e-81,177;CL:0002032,1.29e-79,161;CL:0000837,1.29e-79,161;CL:0002087,7.66e-72,115;CL:0002031,1.01e-68,120;CL:0000763,1.30e-46,108;CL:0000049,1.30e-46,108;CL:0000766,2.45e-46,72;CL:0000557,2.63e-41,67;CL:0002009,1.93e-40,61;CL:0000473,1.20e-39,48;CL:0000234,1.20e-39,48;CL:0002194,9.52e-39,59;CL:0000576,9.52e-39,59;CL:0000040,9.52e-39,59;CL:0000559,9.52e-39,59;CL:0000839,6.87e-37,66;CL:0000860,2.25e-36,42;CL:0002057,2.25e-36,42;CL:0000542,3.28e-28,53;CL:0000051,3.28e-28,53;CL:0000838,1.77e-27,52;CL:0000134,3.44e-18,354;CL:0002320,6.27e-17,361;CL:0000084,1.54e-16,25;CL:0000827,1.54e-16,25;CL:0000219,5.54e-14,386;CL:0000791,1.47e-11,18;CL:0000789,1.47e-11,18;CL:0002420,1.47e-11,18;CL:0002419,1.47e-11,18;CL:0000790,1.47e-11,18;CL:0000945,2.29e-10,24;CL:0000826,2.29e-10,24;CL:0000048,1.48e-09,427;CL:0000034,5.84e-09,441;CL:0000723,7.22e-09,433;CL:0000094,9.07e-09,8;CL:0000990,1.15e-08,8;CL:0000451,2.62e-08,10;CL:0002393,1.79e-07,9;CL:0002397,1.79e-07,9;CL:0000236,3.03e-07,14;CL:0000081,4.18e-07,11;CL:0000625,4.95e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-26;42!CL:0000051;1.81e-16;53!CL:0000049;5.52e-13;108!CL:0000790;1.71e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!5.00e-08!51;DOID:0060083!5.00e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.62e-07,51;DOID:0060083,2.62e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-36!102;UBERON:0003061!2.37e-36!102;UBERON:0002193!6.91e-31!112;UBERON:0002371!3.64e-28!80;UBERON:0001474!1.17e-25!86;UBERON:0002405!8.68e-20!115;UBERON:0004765!1.14e-17!101;UBERON:0001434!1.14e-17!101;UBERON:0002384!3.26e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-44,98;UBERON:0003061,1.97e-44,98;UBERON:0002193,9.79e-40,108;UBERON:0002371,1.63e-35,76;UBERON:0002405,4.86e-35,93;UBERON:0001474,6.74e-32,82;UBERON:0004765,8.93e-27,90;UBERON:0001434,1.25e-21,100;UBERON:0002384,6.11e-16,371;UBERON:0003081,5.08e-09,203;UBERON:0002204,7.41e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,4.67973359864691,4.40780375356604,13.3743854128627,7.29275856384704,13.3141866051825,0,0,0,5.73257284294232,1.84820002233648,1.17440175733939,17.1738576644882,18.8511780621933,19.9650001058584,1.11957737119962,2.59114932815184,2.57575567634187,35.4771702622138,28.7185717203495,25.9564945470963,30.6806328715504,28.370584273506,15.4853185447552,21.8646218164834,24.0791064137355,9.45928919554341,17.2372840368309,11.6187243045089,6.77132432971709,34.4483481362967,23.4699289049747,14.6070264889305,37.9544026539919,24.3906060577831,23.6554736545645,12.2044981069085,22.1404659960011,15.7703157697097,23.2167390902867,29.5040316839393,15.5705562248894,19.8486445552827,17.2089363078666,8.03598725408932,27.848377121135,17.3090488914155,10.4432587855492,2.32380814943136,7.65375479874157,3.35453832813401,6.17807471305723,6.90813707070929,7.39337698806569,8.26536956849621,5.76858363877361,7.48923030434999,8.79981222306614,4.36910889009705,2.66852776159066,5.9742231159311,4.40435585739614,3.4485146397269,1.32208974556972,2.86216126360609,11.9534723512984,23.4894875748376,19.4959346343867,7.93027971474155,2.24203425192614,1.31692042387539,10.8190373562608,8.25322601773246,10.2800749499755,7.52339229258051,4.88883399950386,4.2610302516126,3.89653456815823,5.57052284425868,4.71369451959739,6.86755073209225,5.68688113906533,9.09448370052294,10.0145697621106,9.86627427622057,4.97430032014527,6.95527405764126,4.89345658434799,2.40786745280742,2.09071047609954,6.11870450566857,4.98186641682498,6.8725489096526,4.04831507231205,5.09704662918555,7.1619179924206,5.70271226669025,1.50575119077773,1.15187950038977,2.49861453104692,3.78843603270427,3.28451198768419,10.8867641341356,9.89528724398977,10.5721814834443,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.785874452986276,0,0,6.49094787309367,4.35324343248168,7.31268782853758,10.0166062208244,14.8718676802833,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,50.076558625704,27.1446184903828,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.368502951935304,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0.818238361772504,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,2.57296375277154,2.76269842704961,0,0,3.19428360107579,2.86593973132773,3.37415441836875,3.639701100169,2.61455332910887,3.08451804844426,3.91010793664477,3.13954344200554,5.38646019724947,0,0,0,2.94017422771084,0,0.982827216677626,0,5.29755719297581,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,3.69325509131096,4.68008530278475,7.8774516013026,0,0.335964256397719,0,0,0,0,2.46331618947972,1.58487181223807,2.07328115540772,0.720599767084807,2.14612136824846,0.063497894292169,0,0,0,0,0.901029173531752,0,0,0,0.22001485746285,0,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,6.08118903205952,4.01805673145701,4.21667878966063,0,0,0,1.01346914667305,0.61642896765115,1.25342674267927,7.62178979155985,8.27529192848094,7.76259269494262,6.41715181398742,0,0,0,0,0,56.1755267960387,23.932916736322,25.2793463195982,0,0,0,0,0,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0,0,0.347534457872331,0,0,6.82334486205528,8.62856803274467,11.7400313583789,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.459257792658427,0.546273504020151,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0.509752546090077,0,1.56712328305525,0,0,0,0,0,2.16386124460217,1.19040304263846,0.742585499285292,0.574265537996172,0,0,1.54673149267395,0,0,0.413509717453592,0.107420244868274,0.145016693914229,2.47157219506693,4.18450567539666,0,0.384380134730212,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,1.28381696410176,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.707027159768564,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,1.97701981631236,0,0,0,0,0,0.764637207142375,11.3929437434833,4.04994018278241,4.52498500394814,0.648473311192717,0.540031437238115,7.13812658664843,0.320472213382419,0,0.245040215981032,8.17533970553162,0.28853842595289,5.19335456443423,10.2032814546446,1.99579371432817,3.63860203251497,0.635020748171649,1.62310970137278,0.280797178113459,2.9670508274315,0.626719583092093,2.50634477090067,1.18504244461122,3.53293765228139,2.01799707191048,3.83261613921294,0,0.614481528616916,0.671028323677248,0.166849141711909,0.781552381608161,0,0,0.270455678475983,2.33150377598474,2.81974010175699,0,0.586032717087576,0.242721043499027,21.3971297812758,0,0,0.593929361665277,0,0.994147647766298,0.281338832821026,0.333926115068718,6.0977433463901,0,1.79323189425963,2.48655523978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| ||
|short_description=p2@FMNL1 | |||
}} | }} |
Latest revision as of 00:57, 25 September 2015
Short description: | p2@FMNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FMNL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -117bp_to_ENST00000328118, ENST00000331495, NM_005892, uc002iin.2_5end |
EntrezGene: | FMNL1 |
HGNC: | 1212 |
UniProt: | O95466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-44 | 98 |
blood island | 1.97e-44 | 98 |
hemolymphoid system | 9.79e-40 | 108 |
bone marrow | 1.63e-35 | 76 |
immune system | 4.86e-35 | 93 |
bone element | 6.74e-32 | 82 |
skeletal element | 8.93e-27 | 90 |
skeletal system | 1.25e-21 | 100 |
connective tissue | 6.11e-16 | 371 |
lateral plate mesoderm | 5.08e-09 | 203 |
musculoskeletal system | 7.41e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.62e-07 | 51 |
immune system cancer | 2.62e-07 | 51 |