FFCP PHASE1:Hg19::chr12:80191157..80191179,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:80191157..80191179,- to FFCP PHASE1:Hg19::chr12:80191157..80191179,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4659 | |EntrezGene=4659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7618 | |HGNC=7618 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000551781_5end | |||
|cluster_id=chr12:80191157..80191179,- | |||
|description=CAGE_peak_7_at_PPP1R12A_5end | |||
|id=chr12:80191157..80191179,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.16e-09!235;DOID:14566!1.06e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-09!115;UBERON:0001049!6.13e-09!57;UBERON:0005068!6.13e-09!57;UBERON:0006241!6.13e-09!57;UBERON:0007135!6.13e-09!57;UBERON:0001017!2.25e-08!82;UBERON:0000955!2.28e-08!69;UBERON:0006238!2.28e-08!69;UBERON:0003080!5.10e-08!42;UBERON:0000073!5.79e-08!94;UBERON:0001016!5.79e-08!94;UBERON:0005743!7.19e-08!86;UBERON:0002780!1.49e-07!41;UBERON:0001890!1.49e-07!41;UBERON:0006240!1.49e-07!41;UBERON:0002616!2.20e-07!59;UBERON:0002020!3.34e-07!34;UBERON:0003528!3.34e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.17e-10;22!UBERON:0001950;2.47e-10;20!UBERON:0000956;6.60e-09;25!UBERON:0000203;6.60e-09;25!UBERON:0003528;3.54e-08;34!UBERON:0002020;3.54e-08;34!UBERON:0002791;2.17e-07;32!UBERON:0001869;2.35e-07;32!UBERON:0002780;4.17e-07;41!UBERON:0001890;4.17e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.67e-11,56;UBERON:0005068,2.67e-11,56;UBERON:0006241,2.67e-11,56;UBERON:0007135,2.67e-11,56;UBERON:0000073,3.00e-11,53;UBERON:0002616,3.00e-11,53;UBERON:0002619,4.03e-11,22;UBERON:0001950,9.29e-11,20;UBERON:0002780,2.41e-10,41;UBERON:0001890,2.41e-10,41;UBERON:0003080,2.41e-10,41;UBERON:0006240,2.41e-10,41;UBERON:0003528,3.53e-10,34;UBERON:0002020,3.53e-10,34;UBERON:0000956,2.66e-09,25;UBERON:0000203,2.66e-09,25;UBERON:0007023,9.66e-09,114;UBERON:0002791,1.34e-08,32;UBERON:0001869,1.34e-08,32;UBERON:0000955,1.55e-08,68;UBERON:0006238,1.55e-08,68;UBERON:0002346,1.75e-08,86;UBERON:0001893,7.99e-08,34;UBERON:0001017,2.59e-07,81;UBERON:0003075,2.59e-07,82;UBERON:0007284,2.59e-07,82 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.821246550437305,0.251085279189606,0.534893840235659,0.57470412614962,0.393553906568396,0,0.383829398097213,0,0,0,0,0.46480320348181,0.426507697462265,0,0,1.80490002723128,1.73608696572681,0,0,0,0.145398238779565,1.13362783106643,0.485168122375632,1.39457422143411,1.23350366406548,0.309706370895104,0.863077176966451,1.2808035326455,0,0,0.645484683583826,0,1.50593871634084,0.272906150057846,0,0.918251677112708,0,2.55734850319616,0.989553900560148,0.598390972864896,0.426224750532694,1.45104619314292,2.8369261234557,0,1.00499466102697,1.5644487552606,0,0.605399502633369,0.368277635987565,0,0.422510572623884,0.212604299965044,0,0.112328631146495,0.150176892841506,0.803627933485401,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,1.17903228824749,0.822405995998037,0.167186495390678,0,0,0,0.222820913770347,0.589211814949674,0,1.08321545506006,1.40900451698243,0.650296737799391,1.15106533222573,0.829050053357545,0,0.296573126324121,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0.255973222308837,0,0,0,1.41124720257313,4.01160293675261,1.15859523106239,2.43806866313962,0.670700859703636,0.383587685530591,1.80719576192283,0,0.724232594804119,0,0,0.378139268656271,0.443458794925128,0.966182642624386,0.327447688744282,0,0,0.324547393654683,0.696518949197069,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0.488124115096339,0,0,0.17859945656816,0.673588117878509,0.450445921933289,0,0,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0.573673241497627,0.709336764396714,1.12135520028461,1.06748995729705,0,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0.298897361103602,0.23486899728753,0.647491777472526,0.280901613404497,0,0.491337269247072,0,0,1.48360157567134,0,0,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0.45071417671979,0.226864366320042,3.04962380671065,0.85422955527427,0.847727604638247,2.40072876867522,1.03052529238439,1.8034837803194,0.37223371266318,1.68776332241266,0.68205903612839,3.28163906517349,0.184099797284599,0.646584227275248,3.90510551768276,0.906768884048762,1.01736355386293,0.193260853163297,0,0,1.21973706129595,0.397589304964456,0.464775771478074,0.932949495138334,0.252320850875628,2.18986415445498,0,0,0,1.39310378409594,0,0.118306800039844,0.337169380156203,0.482022059766964,0.661763836394364,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0.329250856225877,0,0.804231779293047,0.740707561268237,0,0,0,0.695582429850461,0.352226082707465,0.144366447761074,0.462985512576611,1.14152491340759,0.790204397959275,0,0.246217006087397,0,0,0,0.671928512795438,0.141775097242386,0.985143749731331,1.16253575405585,0.383382679165211,0.492663237895943,0.528290604079356,0.207328115540772,0,0.12624243342638,0.190493682876507,0,0,0,0.719792448923265,0.300343057843917,0,0.112131084345361,0,0.2933531432838,0,0,1.690605505112,0.797814349754612,0,0,0,0,1.00084595560703,0,0,0.325736184293735,0,0,0,0,0.99972991182057,0,0.502257091432126,0,0.479249710983165,1.14861935834114,0,0.723906533337896,0.410952645100767,0.358121926479791,0.448340575974109,0.985153801009636,1.2937654491571,1.41177339907723,0.76228387266739,0,0,0.167516265334349,0.637938751653163,2.99602809578873,5.9832291840805,0.414415513436035,0.12269149171914,1.00034104211935,0.271265023699736,3.11956292296211,1.78428988797162,2.05013139544115,1.7571212248907,0,0,0,3.32112799267718,0,0.695068915744663,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0,0,0.460385919864187,1.12264037773229,0.384417447767103,0,1.28683136914886,0,1.23367755042124,0.532685175939381,0.739144404124282,0.519254429183621,0.697262270759755,0.120859449591622,0.40101294060657,0.736647911487171,0.459257792658427,1.27463817604702,0.131124414959424,0,0.385076685522074,0,0,0.316654886678627,0,0,0.647747748306418,0,0,0,0,0,0,0.657779629937804,0.261435451024901,1.28225062558195,0,0,0.206082023295445,1.19040304263846,0.165018999841176,0,0,0,0.48335359146061,0,0,0.413509717453592,0.429680979473094,0.725083469571143,0.340906509664404,0.356128142586949,0.330569830721956,0.192190067365106,0.255225424989168,0.10115778085555,0.929691098594572,0.94443704049192,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0.731140468893853,0,0.272999822815972,0.424216295861138,0,0,0.66343897524122,0,0,0.655894752046633,0,0.30982349809975,0,0.717056761020258,0.0982490410131212,0,0,1.47775344708365,0.987884678879706,0,0,0.28866633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| ||
|short_description=p7@PPP1R12A | |||
}} | }} |
Latest revision as of 00:44, 25 September 2015
Short description: | p7@PPP1R12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PPP1R12A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000551781_5end |
EntrezGene: | PPP1R12A |
HGNC: | 7618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.67e-11 | 56 |
neural rod | 2.67e-11 | 56 |
future spinal cord | 2.67e-11 | 56 |
neural keel | 2.67e-11 | 56 |
regional part of nervous system | 3.00e-11 | 53 |
regional part of brain | 3.00e-11 | 53 |
regional part of cerebral cortex | 4.03e-11 | 22 |
neocortex | 9.29e-11 | 20 |
regional part of forebrain | 2.41e-10 | 41 |
forebrain | 2.41e-10 | 41 |
anterior neural tube | 2.41e-10 | 41 |
future forebrain | 2.41e-10 | 41 |
brain grey matter | 3.53e-10 | 34 |
gray matter | 3.53e-10 | 34 |
cerebral cortex | 2.66e-09 | 25 |
pallium | 2.66e-09 | 25 |
adult organism | 9.66e-09 | 114 |
regional part of telencephalon | 1.34e-08 | 32 |
cerebral hemisphere | 1.34e-08 | 32 |
brain | 1.55e-08 | 68 |
future brain | 1.55e-08 | 68 |
neurectoderm | 1.75e-08 | 86 |
telencephalon | 7.99e-08 | 34 |
central nervous system | 2.59e-07 | 81 |
neural plate | 2.59e-07 | 82 |
presumptive neural plate | 2.59e-07 | 82 |