FFCP PHASE1:Hg19::chr16:19896150..19896205,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51704 | |EntrezGene=51704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13308 | |HGNC=13308 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZH0 | |UniProt=Q9NZH0 | ||
|association_with_transcript=0bp_to_NM_016235,uc002dgt.2_5end | |association_with_transcript=0bp_to_NM_016235,uc002dgt.2_5end | ||
|cluster_id=chr16:19896150..19896205,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_GPRC5B_5end | |description=CAGE_peak_1_at_GPRC5B_5end | ||
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|ontology_enrichment_celltype=CL:0000222!2.64e-15!119;CL:0000213!2.04e-14!57;CL:0000215!2.04e-14!57;CL:0002078!2.41e-09!44;CL:0000077!2.80e-08!19;CL:0000115!3.14e-08!35;CL:0002321!5.97e-07!248 | |ontology_enrichment_celltype=CL:0000222!2.64e-15!119;CL:0000213!2.04e-14!57;CL:0000215!2.04e-14!57;CL:0002078!2.41e-09!44;CL:0000077!2.80e-08!19;CL:0000115!3.14e-08!35;CL:0002321!5.97e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.42e-08;19!CL:0000213;2.98e-08;58!CL:0000215;2.98e-08;58!CL:0000115;1.51e-07;36!CL:0002078;6.76e-07;45 | |ontology_enrichment_celltype_v019=CL:0000077;1.42e-08;19!CL:0000213;2.98e-08;58!CL:0000215;2.98e-08;58!CL:0000115;1.51e-07;36!CL:0002078;6.76e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.06e-16,121;CL:0000213,2.69e-15,58;CL:0000215,2.69e-15,58;CL:0002078,5.65e-10,45;CL:0000115,8.28e-09,36;CL:0000077,1.37e-08,19;CL:0002321,1.19e-07,250;CL:0002139,9.87e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.25e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.01e-40!241;UBERON:0000025!4.31e-38!194;UBERON:0005743!6.10e-37!86;UBERON:0001017!6.25e-37!82;UBERON:0000073!2.00e-33!94;UBERON:0001016!2.00e-33!94;UBERON:0007023!6.27e-33!115;UBERON:0001049!8.42e-33!57;UBERON:0005068!8.42e-33!57;UBERON:0006241!8.42e-33!57;UBERON:0007135!8.42e-33!57;UBERON:0000477!8.10e-32!286;UBERON:0000955!8.37e-31!69;UBERON:0006238!8.37e-31!69;UBERON:0000119!4.31e-30!312;UBERON:0000483!5.44e-30!309;UBERON:0002616!2.26e-29!59;UBERON:0003075!3.02e-28!86;UBERON:0007284!3.02e-28!86;UBERON:0002346!5.81e-26!90;UBERON:0003080!3.10e-24!42;UBERON:0002780!5.81e-24!41;UBERON:0001890!5.81e-24!41;UBERON:0006240!5.81e-24!41;UBERON:0001893!6.79e-21!34;UBERON:0002020!7.61e-21!34;UBERON:0003528!7.61e-21!34;UBERON:0002791!2.93e-20!33;UBERON:0001869!1.71e-19!32;UBERON:0003056!3.72e-17!61;UBERON:0004121!4.73e-17!169;UBERON:0000924!4.71e-16!173;UBERON:0006601!4.71e-16!173;UBERON:0000481!8.03e-16!347;UBERON:0000475!1.29e-15!365;UBERON:0000033!2.00e-15!123;UBERON:0000153!4.03e-15!129;UBERON:0007811!4.03e-15!129;UBERON:0000956!4.28e-15!25;UBERON:0000203!4.28e-15!25;UBERON:0003914!7.05e-14!118;UBERON:0000468!7.37e-14!659;UBERON:0002619!9.06e-14!22;UBERON:0000467!5.08e-13!625;UBERON:0000480!7.49e-13!626;UBERON:0001950!1.63e-12!20;UBERON:0000064!4.45e-12!219;UBERON:0000055!7.53e-12!69;UBERON:0004872!1.28e-11!84;UBERON:0000922!4.63e-11!612;UBERON:0002049!1.45e-10!79;UBERON:0007798!1.45e-10!79;UBERON:0003103!3.47e-10!69;UBERON:0003076!1.30e-09!15;UBERON:0003057!1.30e-09!15;UBERON:0002050!2.16e-09!605;UBERON:0005423!2.16e-09!605;UBERON:0000923!2.81e-09!604;UBERON:0005291!2.81e-09!604;UBERON:0006598!2.81e-09!604;UBERON:0002532!2.81e-09!604;UBERON:0001981!3.74e-09!60;UBERON:0007500!3.74e-09!60;UBERON:0004537!3.74e-09!60;UBERON:0006965!3.74e-09!60;UBERON:0001009!6.26e-09!113;UBERON:0004732!1.73e-08!13;UBERON:0004535!3.18e-08!110;UBERON:0000490!4.89e-08!138;UBERON:0000062!7.05e-08!511;UBERON:0004733!8.19e-08!12;UBERON:0002028!8.19e-08!12;UBERON:0007277!8.19e-08!12;UBERON:0002308!3.02e-07!9;UBERON:0000125!3.02e-07!9;UBERON:0002420!3.48e-07!9;UBERON:0007245!3.48e-07!9;UBERON:0010009!3.48e-07!9;UBERON:0010011!3.48e-07!9;UBERON:0000454!3.48e-07!9;UBERON:0007100!3.85e-07!27 | |ontology_enrichment_uberon=UBERON:0004111!2.01e-40!241;UBERON:0000025!4.31e-38!194;UBERON:0005743!6.10e-37!86;UBERON:0001017!6.25e-37!82;UBERON:0000073!2.00e-33!94;UBERON:0001016!2.00e-33!94;UBERON:0007023!6.27e-33!115;UBERON:0001049!8.42e-33!57;UBERON:0005068!8.42e-33!57;UBERON:0006241!8.42e-33!57;UBERON:0007135!8.42e-33!57;UBERON:0000477!8.10e-32!286;UBERON:0000955!8.37e-31!69;UBERON:0006238!8.37e-31!69;UBERON:0000119!4.31e-30!312;UBERON:0000483!5.44e-30!309;UBERON:0002616!2.26e-29!59;UBERON:0003075!3.02e-28!86;UBERON:0007284!3.02e-28!86;UBERON:0002346!5.81e-26!90;UBERON:0003080!3.10e-24!42;UBERON:0002780!5.81e-24!41;UBERON:0001890!5.81e-24!41;UBERON:0006240!5.81e-24!41;UBERON:0001893!6.79e-21!34;UBERON:0002020!7.61e-21!34;UBERON:0003528!7.61e-21!34;UBERON:0002791!2.93e-20!33;UBERON:0001869!1.71e-19!32;UBERON:0003056!3.72e-17!61;UBERON:0004121!4.73e-17!169;UBERON:0000924!4.71e-16!173;UBERON:0006601!4.71e-16!173;UBERON:0000481!8.03e-16!347;UBERON:0000475!1.29e-15!365;UBERON:0000033!2.00e-15!123;UBERON:0000153!4.03e-15!129;UBERON:0007811!4.03e-15!129;UBERON:0000956!4.28e-15!25;UBERON:0000203!4.28e-15!25;UBERON:0003914!7.05e-14!118;UBERON:0000468!7.37e-14!659;UBERON:0002619!9.06e-14!22;UBERON:0000467!5.08e-13!625;UBERON:0000480!7.49e-13!626;UBERON:0001950!1.63e-12!20;UBERON:0000064!4.45e-12!219;UBERON:0000055!7.53e-12!69;UBERON:0004872!1.28e-11!84;UBERON:0000922!4.63e-11!612;UBERON:0002049!1.45e-10!79;UBERON:0007798!1.45e-10!79;UBERON:0003103!3.47e-10!69;UBERON:0003076!1.30e-09!15;UBERON:0003057!1.30e-09!15;UBERON:0002050!2.16e-09!605;UBERON:0005423!2.16e-09!605;UBERON:0000923!2.81e-09!604;UBERON:0005291!2.81e-09!604;UBERON:0006598!2.81e-09!604;UBERON:0002532!2.81e-09!604;UBERON:0001981!3.74e-09!60;UBERON:0007500!3.74e-09!60;UBERON:0004537!3.74e-09!60;UBERON:0006965!3.74e-09!60;UBERON:0001009!6.26e-09!113;UBERON:0004732!1.73e-08!13;UBERON:0004535!3.18e-08!110;UBERON:0000490!4.89e-08!138;UBERON:0000062!7.05e-08!511;UBERON:0004733!8.19e-08!12;UBERON:0002028!8.19e-08!12;UBERON:0007277!8.19e-08!12;UBERON:0002308!3.02e-07!9;UBERON:0000125!3.02e-07!9;UBERON:0002420!3.48e-07!9;UBERON:0007245!3.48e-07!9;UBERON:0010009!3.48e-07!9;UBERON:0010011!3.48e-07!9;UBERON:0000454!3.48e-07!9;UBERON:0007100!3.85e-07!27 | ||
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| ||
|short_description=p1@GPRC5B | |short_description=p1@GPRC5B | ||
}} | }} |
Latest revision as of 00:37, 25 September 2015
Short description: | p1@GPRC5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPRC5B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_NM_016235, uc002dgt.2_5end |
EntrezGene: | GPRC5B |
HGNC: | 13308 |
UniProt: | Q9NZH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.06e-16 | 121 |
lining cell | 2.69e-15 | 58 |
barrier cell | 2.69e-15 | 58 |
meso-epithelial cell | 5.65e-10 | 45 |
endothelial cell | 8.28e-09 | 36 |
mesothelial cell | 1.37e-08 | 19 |
embryonic cell | 1.19e-07 | 250 |
endothelial cell of vascular tree | 9.87e-07 | 24 |