FFCP PHASE1:Hg19::chr22:43040607..43040645,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:43040607..43040645,- to FFCP PHASE1:Hg19::chr22:43040607..43040645,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1727 | |EntrezGene=1727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2873 | |HGNC=2873 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z7L3 | |UniProt=B7Z7L3 | ||
|association_with_transcript=0bp_to_NM_001171660,uc011aps.1_5end | |||
|cluster_id=chr22:43040607..43040645,- | |||
|description=CAGE_peak_16_at_CYB5R3_5end | |||
|id=chr22:43040607..43040645,- | |||
|ontology_enrichment_celltype=CL:0000136!1.13e-16!15;CL:0002139!3.42e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.86e-43;13!CL:0002334;2.09e-13;12!CL:0002615;8.59e-12;3!CL:0002144;1.39e-11;3!CL:0002580;3.49e-11;3!CL:0002521;3.81e-11;3!CL:0002579;8.64e-11;3!CL:0002138;1.93e-09;6!CL:0002617;1.12e-08;2!CL:0000669;3.03e-08;4!CL:0002195;4.69e-08;2!CL:0002571;4.69e-08;2!CL:0002575;5.30e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.58e-37,15;CL:0002334,1.93e-13,12;CL:0002615,9.09e-12,3;CL:0002144,1.39e-11,3;CL:0002521,2.44e-11,3;CL:0002580,3.44e-11,3;CL:0002579,7.57e-11,3;CL:0005020,1.39e-09,6;CL:0002138,1.39e-09,6;CL:0005022,1.39e-09,6;CL:0002617,1.11e-08,2;CL:0000669,3.40e-08,4;CL:0002575,3.88e-08,2;CL:0002195,5.31e-08,2;CL:0002571,5.31e-08,2;CL:0002078,4.82e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;1.93e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!1.68e-08!14;UBERON:0002049!2.43e-08!79;UBERON:0007798!2.43e-08!79;UBERON:0003688!4.49e-08!6;UBERON:0002358!4.49e-08!6;UBERON:0003684!4.49e-08!6;UBERON:0001178!4.49e-08!6;UBERON:0000477!1.18e-07!286;UBERON:0000055!1.92e-07!69;UBERON:0004457!4.97e-07!12;UBERON:0000042!4.97e-07!12;UBERON:0001473!6.58e-07!8;UBERON:0004536!6.58e-07!8;UBERON:0006558!6.58e-07!8;UBERON:0001009!6.58e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.78e-21;6!UBERON:0002358;7.78e-21;6!UBERON:0003684;7.78e-21;6!UBERON:0001178;7.78e-21;6!UBERON:0004457;3.55e-18;9!UBERON:0000042;3.55e-18;9!UBERON:0000310;1.89e-12;10!UBERON:0010523;1.39e-11;3!UBERON:0001915;1.39e-11;3!UBERON:0001982;1.39e-11;3!UBERON:0001013;1.52e-11;14!UBERON:0001443;2.99e-11;11!UBERON:0002190;3.81e-11;3!UBERON:0001473;1.71e-10;8!UBERON:0004536;1.71e-10;8!UBERON:0006558;1.71e-10;8!UBERON:0005406;1.08e-08;2!UBERON:0002465;2.50e-08;10!UBERON:0002072;7.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.19e-21,6;UBERON:0002358,7.19e-21,6;UBERON:0003684,7.19e-21,6;UBERON:0001178,7.19e-21,6;UBERON:0004457,2.16e-13,12;UBERON:0000042,2.16e-13,12;UBERON:0000310,1.71e-12,10;UBERON:0010523,1.39e-11,3;UBERON:0001915,1.39e-11,3;UBERON:0001982,1.39e-11,3;UBERON:0001013,1.51e-11,14;UBERON:0002190,2.44e-11,3;UBERON:0001443,2.74e-11,11;UBERON:0001473,1.15e-10,8;UBERON:0004536,1.15e-10,8;UBERON:0006558,1.15e-10,8;UBERON:0005406,1.07e-08,2;UBERON:0002465,1.83e-08,10;UBERON:0002072,5.94e-07,5 | |||
|phase1_expression=7.99384868790449,24.1933591996811,6.76581139660662,5.00366491765652,4.46961094427288,9.59572376510406,5.06599756336621,1.89515962028049,3.65659879479774,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0,0,0.434539556882471,0,0,0,0,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,0,1.33888245105868,6.8480983908555,2.28081631715554,5.6134273236079,0,0.81014194788176,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0.573673241497627,0.709336764396714,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0,2.57307626996383,0,0,0.312160076830321,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0.910161361938026,1.43723628363248,0,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0.37223371266318,0,0.292311015483596,0.252433774244115,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.337169380156203,0.241011029883482,0,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,7.21832238805369,1.85194205030644,4.94660795809955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.87192013766656,0,0,3.57656445851882,0.845302752556,0,0,0.514414748524284,0,0,3.43147184779554,2.71310802695722,0,0,2.48774364119782,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0,0,0,0,0,0.702848489956279,0.300946099727719,0,0,0,0.184369168541703,0,9.59425671567429,1.71571711905428,0,0,0,0,0,0,3.72161711728165,2.60885354589706,2.24528075546459,6.66323576129645,1.53512174720011,1.28683136914886,23.7468906311986,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,1.54227252690289,0,1.00337954770971,0,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.618246069886334,0,0,0,0,12.8547143875328,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06461206063404,0,0,0.143124886741991,0.372158369359667,0.316379424718726,1.14378116354295,0,0,0,0,0,0,0,0.808729926293264,0,0,0.48763373908959,0.487426979262569,0,0.272999822815972,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0.392996164052485,0.35667105148125,0,0.633322905892992,1.31717957183961,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.95497793895076,0,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.455768223388005,0,0,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,3.86788897277961,0,0.558564802544508,0.916641696046735,0,0.199679000498991,1.28767814440971,0.223171457441873,0.671834724867263,0.360299883542404,0,0.472699093843342,0.0824158583811665,0.202210631562555,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,2.0055191521816,1.22538230705385,1.96723578425883,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0.901545653983311,0.761610424337591,0,0.363697318405119,0,0.928067519756987,0.796191777397232,0.400027764663154,0.343395705182793,0.336749488765919,1.26184898228651,0,1.28664954824955,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.256916900385838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.82731361184183,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0,0.171488009437418,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,1.07963795609311,0,0.500335809236594,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0.322289439867886,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,3.56159881625725,2.41167717140561,0,0.1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| 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| ||
|short_description=p16@CYB5R3 | |||
}} | }} |
Latest revision as of 00:35, 25 September 2015
Short description: | p16@CYB5R3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CYB5R3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001171660, uc011aps.1_5end |
EntrezGene: | CYB5R3 |
HGNC: | 2873 |
UniProt: | B7Z7L3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.58e-37 | 15 |
preadipocyte | 1.93e-13 | 12 |
adipocyte of omentum tissue | 9.09e-12 | 3 |
capillary endothelial cell | 1.39e-11 | 3 |
subcutaneous fat cell | 2.44e-11 | 3 |
preadipocyte of the breast | 3.44e-11 | 3 |
omentum preadipocyte | 7.57e-11 | 3 |
lymphangioblast | 1.39e-09 | 6 |
endothelial cell of lymphatic vessel | 1.39e-09 | 6 |
vascular lymphangioblast | 1.39e-09 | 6 |
adipocyte of breast | 1.11e-08 | 2 |
pericyte cell | 3.40e-08 | 4 |
central nervous system pericyte | 3.88e-08 | 2 |
hepatic stem cell | 5.31e-08 | 2 |
hepatic mesenchymal stem cell | 5.31e-08 | 2 |
meso-epithelial cell | 4.82e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.19e-21 | 6 |
peritoneum | 7.19e-21 | 6 |
abdominal cavity | 7.19e-21 | 6 |
visceral peritoneum | 7.19e-21 | 6 |
cavity lining | 2.16e-13 | 12 |
serous membrane | 2.16e-13 | 12 |
breast | 1.71e-12 | 10 |
microcirculatory vessel | 1.39e-11 | 3 |
endothelium of capillary | 1.39e-11 | 3 |
capillary | 1.39e-11 | 3 |
adipose tissue | 1.51e-11 | 14 |
subcutaneous adipose tissue | 2.44e-11 | 3 |
chest | 2.74e-11 | 11 |
lymphatic vessel | 1.15e-10 | 8 |
lymph vasculature | 1.15e-10 | 8 |
lymphatic part of lymphoid system | 1.15e-10 | 8 |
perirenal fat | 1.07e-08 | 2 |
lymphoid system | 1.83e-08 | 10 |
hypodermis | 5.94e-07 | 5 |