FFCP PHASE1:Hg19::chr19:10397222..10397240,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:10397222..10397240,+
|short_description=p4@ICAM4
|description=CAGE_peak_4_at_ICAM4_5end
|association_with_transcript=-402bp_to_NM_001039132,NM_001544,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3386 | |EntrezGene=3386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5347 | |HGNC=5347 | ||
|TSSclassifier=strong | |||
|UniProt=Q14773,Q9BWR0 | |UniProt=Q14773,Q9BWR0 | ||
|association_with_transcript=-402bp_to_NM_001039132,NM_001544,NM_022377_5end | |||
|cluster_id=chr19:10397222..10397240,+ | |||
|description=CAGE_peak_4_at_ICAM4_5end | |||
|id=chr19:10397222..10397240,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.72e-20!76;CL:0002057!4.72e-18!42;CL:0002194!1.84e-17!63;CL:0000576!1.84e-17!63;CL:0000040!1.84e-17!63;CL:0000559!1.84e-17!63;CL:0002009!2.65e-17!65;CL:0000557!6.69e-17!71;CL:0000839!1.54e-16!70;CL:0000860!5.77e-16!45;CL:0000738!7.23e-15!140;CL:0002087!1.08e-13!119;CL:0002031!4.88e-12!124;CL:0000988!2.46e-11!182;CL:0000763!2.12e-10!112;CL:0000049!2.12e-10!112;CL:0000037!2.16e-09!172;CL:0000566!2.16e-09!172;CL:0002032!2.43e-09!165;CL:0000837!2.43e-09!165;CL:0000048!4.58e-08!430;CL:0000723!1.87e-07!436;CL:0000034!6.25e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-25;33!CL:0002057;3.59e-25;33!CL:0000473;8.41e-23;39!CL:0000234;8.41e-23;39!CL:0000576;3.98e-16;48!CL:0000766;3.60e-15;69!CL:0000775;2.15e-12;3!CL:0000081;1.26e-08;11!CL:0000763;1.79e-08;100!CL:0000094;6.92e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.25e-32,72;CL:0000473,1.35e-31,48;CL:0000234,1.35e-31,48;CL:0000860,2.69e-30,42;CL:0002057,2.69e-30,42;CL:0002194,4.44e-29,59;CL:0000576,4.44e-29,59;CL:0000040,4.44e-29,59;CL:0000559,4.44e-29,59;CL:0002009,6.10e-28,61;CL:0000839,2.14e-25,66;CL:0000557,6.24e-25,67;CL:0000763,1.69e-19,108;CL:0000049,1.69e-19,108;CL:0000738,1.03e-16,136;CL:0002087,9.48e-15,115;CL:0000988,1.57e-14,177;CL:0002032,5.23e-13,161;CL:0000837,5.23e-13,161;CL:0002031,1.39e-12,120;CL:0000775,1.75e-12,3;CL:0000037,3.59e-12,168;CL:0000081,1.08e-08,11;CL:0000094,5.70e-08,8;CL:0000048,3.62e-07,427;CL:0000723,6.22e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.07e-18!112;UBERON:0002390!1.16e-16!102;UBERON:0003061!1.16e-16!102;UBERON:0002405!8.10e-16!115;UBERON:0002371!4.12e-14!80;UBERON:0003081!2.41e-12!216;UBERON:0001474!5.38e-12!86;UBERON:0004765!4.38e-10!101;UBERON:0001434!4.38e-10!101;UBERON:0002204!2.86e-09!167;UBERON:0000926!9.95e-07!448;UBERON:0004120!9.95e-07!448;UBERON:0006603!9.95e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-23,76;UBERON:0002193,7.54e-23,108;UBERON:0002390,4.73e-22,98;UBERON:0003061,4.73e-22,98;UBERON:0002405,1.60e-21,93;UBERON:0001474,3.60e-21,82;UBERON:0004765,9.35e-19,90;UBERON:0001434,2.78e-16,100;UBERON:0003081,1.88e-14,203;UBERON:0002204,4.98e-12,167;UBERON:0000926,9.26e-08,315;UBERON:0004120,9.26e-08,315;UBERON:0006603,9.26e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0,0,0.0774672005803016,0.853015394924529,0,2.21598163412751,1.60435557976113,1.51907609501096,0,0,0.257575567634187,0,0,0.242584061187816,2.09186133215116,1.6446715520873,0.309706370895104,6.32923263108731,1.2808035326455,3.07426898855161,2.75796544589295,0,2.70852973188684,0.564727018627814,0.272906150057846,0.674170453335254,4.59125838556354,0.962787081228281,5.11469700639233,1.64925650093358,0.797854630486527,0.852449501065388,2.03146467040009,0.56738522469114,4.9825779919646,3.51748131359441,1.0429658368404,2.82345498116652,1.81619850790011,0.368277635987565,3.48108626184973,0.422510572623884,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0.722878304769133,0,0,0,0,0,0,0,0,0,0,0.324547393654683,1.56716763569341,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,2.01414658554573,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,2.63560834872127,0,0,0.993943903390637,0.12663051166458,0.397227542439656,0.573673241497627,0,0.560677600142307,1.06748995729705,0,0,0,0.490385709340376,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.340296549480063,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.773043412653187,1.09098448236334,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,2.30986316417718,2.31492756288305,0.380508304469197,0,0,0,0.468008530278475,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0,0.50496973370552,0,0,1.17217447210047,0,0,0.300343057843917,0,0.112131084345361,0,0,0.775630294546667,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.602878754119172,0,0.599837947092342,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0,0,0,0,0,3.74503511973591,5.9832291840805,2.48649308061621,0,0,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0,0,0.391602314925481,0.343143423810856,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,1.48418066444991,0.154209693802656,0.177561725313127,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0,0,0.826424576804891,0.384380134730212,0.127612712494584,0,0,0,0,1.23213432070436,0,0,0.55597265731176,0,0,0,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0,0.117812402345686,0.606547444719948,0,1.26377536871694,0.48763373908959,0.487426979262569,0,0.136499911407986,0,0,0.551365343546124,2.65375590096488,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.411362273086194,0,0,0,0,0,0,2.41544127663434,0.144269212976445,0,0,0.199579371432817,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0.311039587661807,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,3.98797195464504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0.141353071433941,0,0.995261931078505,0.265372693510018,0,4.44781693020933,2.96553453471607,2.61054873763638,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.261177619741208,0,0.51595809741485,0,0,0,0.0969890164884194,0,0,0,1.39100228192093,0,0.586654148204409,2.32460578729448,0,0.19980960958213,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0.788662062837943,0.558564802544508,0,2.15361907373044,0,0,0,0.0671834724867263,0.720599767084807,0,0.0787831823072236,0,0,0.0984274815147488,0.338693328263138,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0.104909176269996,0.316801009558219,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.293104467356165,0,0.258565912723101,0,0,0,0.320362237703084,0.157204305099666,0.828478110694391,0,0.197611631897944,0.243585196761792,1.91502377331055,0.544017803369474,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0,0,0.249960815924213,0.454947352624943,0.856396000634902,0.705797459094515,0,0,0,0,0,0,0,0,0.457680136793847,0.302461847526478,0,0.147855149989634,0.796483835818512,0.449803112163605,0.155262956876259,0,1.06336685823198,1.04349012362347,0.300515217994437,2.28483127301277,0,0.363697318405119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| ||
|short_description=p4@ICAM4 | |||
}} | }} |
Latest revision as of 00:34, 25 September 2015
Short description: | p4@ICAM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ICAM4_5end |
Coexpression cluster: | NA |
Association with transcript: | -402bp_to_NM_001039132, NM_001544, NM_022377_5end |
EntrezGene: | ICAM4 |
HGNC: | 5347 |
UniProt: | Q14773Q9BWR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.25e-32 | 72 |
defensive cell | 1.35e-31 | 48 |
phagocyte | 1.35e-31 | 48 |
classical monocyte | 2.69e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.69e-30 | 42 |
monopoietic cell | 4.44e-29 | 59 |
monocyte | 4.44e-29 | 59 |
monoblast | 4.44e-29 | 59 |
promonocyte | 4.44e-29 | 59 |
macrophage dendritic cell progenitor | 6.10e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.14e-25 | 66 |
granulocyte monocyte progenitor cell | 6.24e-25 | 67 |
myeloid cell | 1.69e-19 | 108 |
common myeloid progenitor | 1.69e-19 | 108 |
leukocyte | 1.03e-16 | 136 |
nongranular leukocyte | 9.48e-15 | 115 |
hematopoietic cell | 1.57e-14 | 177 |
hematopoietic oligopotent progenitor cell | 5.23e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.23e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 1.39e-12 | 120 |
neutrophil | 1.75e-12 | 3 |
hematopoietic stem cell | 3.59e-12 | 168 |
blood cell | 1.08e-08 | 11 |
granulocyte | 5.70e-08 | 8 |
multi fate stem cell | 3.62e-07 | 427 |
somatic stem cell | 6.22e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-23 | 76 |
hemolymphoid system | 7.54e-23 | 108 |
hematopoietic system | 4.73e-22 | 98 |
blood island | 4.73e-22 | 98 |
immune system | 1.60e-21 | 93 |
bone element | 3.60e-21 | 82 |
skeletal element | 9.35e-19 | 90 |
skeletal system | 2.78e-16 | 100 |
lateral plate mesoderm | 1.88e-14 | 203 |
musculoskeletal system | 4.98e-12 | 167 |
mesoderm | 9.26e-08 | 315 |
mesoderm-derived structure | 9.26e-08 | 315 |
presumptive mesoderm | 9.26e-08 | 315 |