FFCP PHASE1:Hg19::chr11:8985927..8986008,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1168 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQ34,E9PR12,Q543A1,Q7Z649 | |||
|association_with_transcript=0bp_to_ENST00000309134,ENST00000528117,NM_020644,uc001mhe.1,uc001mhf.1_5end | |||
|cluster_id=chr11:8985927..8986008,- | |||
|description=CAGE_peak_1_at_TMEM9B_5end | |||
|id=chr11:8985927..8986008,- | |||
|ontology_enrichment_celltype=CL:0000766!1.08e-22!76;CL:0000839!4.24e-22!70;CL:0000557!8.79e-22!71;CL:0002009!3.79e-21!65;CL:0002194!5.37e-20!63;CL:0000576!5.37e-20!63;CL:0000040!5.37e-20!63;CL:0000559!5.37e-20!63;CL:0002057!1.76e-18!42;CL:0000860!1.68e-15!45;CL:0002031!8.07e-15!124;CL:0000738!7.66e-14!140;CL:0002087!5.52e-12!119;CL:0000763!4.54e-07!112;CL:0000049!4.54e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.06e-14;39!CL:0000234;4.06e-14;39!CL:0000860;6.30e-13;33!CL:0002057;6.30e-13;33!CL:0000576;4.45e-12;48!CL:0000766;3.55e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.63e-25,72;CL:0000839,1.74e-24,66;CL:0000557,4.07e-24,67;CL:0002009,1.35e-23,61;CL:0002194,2.12e-22,59;CL:0000576,2.12e-22,59;CL:0000040,2.12e-22,59;CL:0000559,2.12e-22,59;CL:0000473,2.39e-22,48;CL:0000234,2.39e-22,48;CL:0000860,1.76e-18,42;CL:0002057,1.76e-18,42;CL:0002031,5.75e-16,120;CL:0000738,7.60e-15,136;CL:0002087,5.38e-13,115;CL:0000763,8.78e-08,108;CL:0000049,8.78e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.52e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.82e-21!80;UBERON:0002390!1.43e-19!102;UBERON:0003061!1.43e-19!102;UBERON:0002193!2.44e-19!112;UBERON:0001474!2.09e-17!86;UBERON:0004765!1.57e-16!101;UBERON:0001434!1.57e-16!101;UBERON:0007023!1.36e-15!115;UBERON:0002204!1.83e-12!167;UBERON:0002405!1.54e-11!115;UBERON:0001049!3.06e-11!57;UBERON:0005068!3.06e-11!57;UBERON:0006241!3.06e-11!57;UBERON:0007135!3.06e-11!57;UBERON:0002616!2.67e-10!59;UBERON:0003080!1.98e-09!42;UBERON:0002780!4.65e-09!41;UBERON:0001890!4.65e-09!41;UBERON:0006240!4.65e-09!41;UBERON:0001017!9.29e-09!82;UBERON:0000955!3.00e-08!69;UBERON:0006238!3.00e-08!69;UBERON:0003081!3.46e-08!216;UBERON:0005743!4.60e-08!86;UBERON:0001893!5.17e-07!34;UBERON:0002020!7.58e-07!34;UBERON:0003528!7.58e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.71e-07;41!UBERON:0001890;6.71e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.95e-23,76;UBERON:0002390,3.40e-21,98;UBERON:0003061,3.40e-21,98;UBERON:0002193,7.70e-21,108;UBERON:0004765,6.93e-20,90;UBERON:0002405,2.63e-19,93;UBERON:0001474,4.26e-19,82;UBERON:0001434,2.04e-18,100;UBERON:0007023,1.32e-15,114;UBERON:0002204,1.03e-13,167;UBERON:0001049,7.13e-11,56;UBERON:0005068,7.13e-11,56;UBERON:0006241,7.13e-11,56;UBERON:0007135,7.13e-11,56;UBERON:0003081,2.97e-10,203;UBERON:0000073,1.47e-09,53;UBERON:0002616,1.47e-09,53;UBERON:0002780,4.65e-09,41;UBERON:0001890,4.65e-09,41;UBERON:0003080,4.65e-09,41;UBERON:0006240,4.65e-09,41;UBERON:0001017,1.87e-08,81;UBERON:0000955,6.13e-08,68;UBERON:0006238,6.13e-08,68;UBERON:0000926,8.15e-08,315;UBERON:0004120,8.15e-08,315;UBERON:0006603,8.15e-08,315;UBERON:0002050,1.65e-07,564;UBERON:0000923,1.73e-07,560;UBERON:0010316,1.73e-07,560;UBERON:0005291,1.73e-07,560;UBERON:0006598,1.73e-07,560;UBERON:0010317,1.73e-07,560;UBERON:0002532,1.73e-07,560;UBERON:0001893,5.17e-07,34;UBERON:0003528,7.58e-07,34;UBERON:0002020,7.58e-07,34;UBERON:0001016,9.55e-07,89 | |||
|phase1_expression=67.4026787093765,62.5173529761671,59.7646673366918,79.057905698973,60.7867088421111,88.9785294582376,22.796989035148,44.2203911398782,50.9311974989685,35.1399529197158,43.9614735822629,49.3677501014189,49.8519588851777,44.6796534185768,73.5702174115973,40.3395087871065,36.7643662094626,46.7398457847919,43.4260190923551,30.164659228813,28.1520953917069,37.3011118558925,38.9280942498237,29.2911269655972,41.0524431475005,22.3891278841497,23.0702656354348,21.4880432986344,68.4453841717093,59.493556705068,70.1317038621824,32.1797428567625,46.988123329407,39.1939250776795,19.1343985433345,22.4627387330126,13.7992206487378,73.1273939262078,63.1715009530946,64.2352177318921,75.6834302930944,75.4672241824222,79.5908503989636,71.826729957105,70.6628014698074,53.1259094001317,78.7934435110271,66.1980299715139,65.0383378879717,81.4169470271686,73.0058013607937,69.5257755872441,62.398968213328,66.4849224091341,58.233389235567,85.0855374732573,73.9575666656762,76.6307081957738,74.9905536308711,62.9020893069143,54.3436556929185,68.609070438837,77.3918991571932,57.5403413219137,64.1362417369171,59.0080633678785,50.4486021686416,73.6158589202258,72.486125660408,66.0254087903555,54.4859552370032,51.5588690382591,53.1656810900686,75.2068819270513,65.2695200892684,78.2026747746242,63.0163620731837,57.3675730654554,57.7004856242518,91.4890907409408,70.0186703740797,77.8149295037341,43.9990611153307,55.7061383487374,58.7076107549946,61.0224218270105,64.864149899834,51.152967155949,50.2394103316495,46.7486339722328,42.6909726832086,44.6300263921913,49.3132464281545,11.8954195721123,36.4330565937998,25.8116403079575,34.8176293101485,38.122043986669,45.0267282808925,56.6762219374399,39.1106719960308,36.9289288473092,37.0170783975031,51.1373997102947,61.2780287547661,58.484948170076,47.6614800226427,54.823084842589,64.11925834702,43.2471689107668,43.9396528279499,41.7316443458476,28.4710201271156,27.5567052932404,27.179236189294,44.7571903655386,40.2381518282017,49.1387247040161,33.1455796545549,48.7405083915868,48.8312590392314,53.225314489109,53.3035921535316,59.7697474091134,51.2215978864618,44.7509006363192,49.2676798152628,41.1277756178454,49.4764362199489,48.0817020890893,31.694892620815,21.4624275105164,24.6774744358014,63.9747299720682,47.6271015104095,66.4845522030181,58.0558741347302,54.9897403441979,25.5244006342983,24.390233720882,25.8234269937791,43.8779902917337,31.3293947931586,41.5278575918561,94.7678389471675,82.3633657425534,91.4750768369792,40.3049155076028,53.1955267025519,49.0323901755026,22.261389625071,20.645630282547,27.0769591253924,40.1368638766047,35.657452077842,24.485505732666,25.2883909509541,40.3130144304153,44.1150165731521,46.1914445615245,29.4065401489677,19.0068026429628,41.4905497831888,25.3687525438649,34.8361037589157,20.8068366901906,20.4321729089815,19.932232045548,4.5994991239765,19.9345788509307,26.0146476381178,55.3477753231466,50.4114343392823,36.6319003799729,54.666914686485,36.469587359399,28.3355646940288,67.9802791174689,50.7175786543651,38.6867544098192,11.7423895302675,41.4401481340829,35.1668470001736,43.5115470785092,34.1635377507129,56.9103927944942,36.2990832422399,23.4321431833797,39.3321696806204,25.1007601479558,44.3862581238849,23.6043342273967,28.9752570418955,23.8766371393822,38.7892925384297,29.111733202889,33.0642499762449,46.3321114340001,42.2826449066332,51.8791976304675,33.056434523547,26.9337782326506,20.3943187391302,37.4036555903647,28.0945677363736,47.199120553049,38.761419197902,28.5849101563253,23.5000422752409,46.5555107624477,45.1414949469867,54.3164883912768,41.8393268708062,26.0216945446085,52.4849534855083,39.6624380766976,43.0671562812498,20.6995694880174,47.4056978007842,60.2939791934168,61.7716690978909,48.8647676404055,36.4555273467548,52.9534737667433,38.1844568827169,40.1526433544605,14.0269762049035,12.7228577588626,12.6651397727775,15.2381750872595,13.1206842455327,11.3142981313507,25.0319251727706,59.1781663137454,37.2964287651697,54.3310475797416,63.5253943869235,33.8357448113954,32.5368451850736,35.6696324227553,36.2867170289576,32.2461577256761,36.77694596222,31.4156948013183,35.9085281179383,36.9357270668535,40.5985500043557,32.2556079747925,25.5175887025468,26.4615680493976,35.4914097501126,25.5535076336183,34.2658145875214,6.18048339180511,39.2333118952532,25.0489003035847,37.0955964681154,29.2244558469811,43.9311609438827,31.4800713539001,32.9066388363428,41.5973914111831,28.8662684050547,31.9967917731212,42.0323125364242,40.1338724775785,39.3537685690119,43.1876925572538,17.3844967551041,24.8960987007513,97.5019344106093,118.172153895315,82.1930327456667,55.3029620521984,45.6911388700898,33.4589229492032,40.9282448752017,40.6887513919547,39.1050332748515,67.4948635917443,64.9797443017608,42.0876074547767,47.2713447207634,50.496973370552,46.3534628332834,42.7827036625271,23.4434894420094,46.1895604261304,44.9356143113524,44.7511156187437,48.0188406819371,29.826868435866,35.748725644329,23.1015600335993,52.8721317449311,10.7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| |||
|short_description=p1@TMEM9B | |||
}} |
Latest revision as of 00:28, 25 September 2015
Short description: | p1@TMEM9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM9B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309134, ENST00000528117, NM_020644, uc001mhe.1, uc001mhf.1_5end |
EntrezGene: | TMEM9B |
HGNC: | 1168 |
UniProt: | Q9NQ34E9PR12Q543A1Q7Z649 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.63e-25 | 72 |
myeloid lineage restricted progenitor cell | 1.74e-24 | 66 |
granulocyte monocyte progenitor cell | 4.07e-24 | 67 |
macrophage dendritic cell progenitor | 1.35e-23 | 61 |
monopoietic cell | 2.12e-22 | 59 |
monocyte | 2.12e-22 | 59 |
monoblast | 2.12e-22 | 59 |
promonocyte | 2.12e-22 | 59 |
defensive cell | 2.39e-22 | 48 |
phagocyte | 2.39e-22 | 48 |
classical monocyte | 1.76e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-18 | 42 |
hematopoietic lineage restricted progenitor cell | 5.75e-16 | 120 |
leukocyte | 7.60e-15 | 136 |
nongranular leukocyte | 5.38e-13 | 115 |
myeloid cell | 8.78e-08 | 108 |
common myeloid progenitor | 8.78e-08 | 108 |