FFCP PHASE1:Hg19::chr3:137728947..137728952,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51208 | |EntrezGene=51208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2039 | |HGNC=2039 | ||
|TSSclassifier=strong | |||
|UniProt=F5H193 | |UniProt=F5H193 | ||
|association_with_transcript=0bp_to_ENST00000536138_5end | |association_with_transcript=0bp_to_ENST00000536138_5end | ||
|cluster_id=chr3:137728947..137728952,+ | |||
|coexpression_cluster_id=C131 | |coexpression_cluster_id=C131 | ||
|description=CAGE_peak_6_at_CLDN18_5end | |description=CAGE_peak_6_at_CLDN18_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!2.61e-08!4 | |ontology_enrichment_celltype=CL:0002563!2.61e-08!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.48e-11;29!UBERON:0001041;9.89e-11;30 | |ontology_enrichment_development_v019=UBERON:0008947;4.48e-11;29!UBERON:0001041;9.89e-11;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!1.33e-29!1;UBERON:0006518!1.33e-29!1;UBERON:0008949!1.33e-29!1;UBERON:0000101!1.33e-29!1;UBERON:0002167!1.33e-29!1;UBERON:0002048!2.09e-12!22;UBERON:0000117!2.09e-12!22;UBERON:0000171!2.09e-12!22;UBERON:0000170!2.09e-12!22;UBERON:0005597!2.09e-12!22;UBERON:0000118!2.09e-12!22;UBERON:0001242!2.61e-08!4;UBERON:0001262!2.61e-08!4;UBERON:0004786!2.61e-08!4;UBERON:0004808!2.61e-08!4;UBERON:0001277!2.61e-08!4;UBERON:0005178!2.86e-08!34;UBERON:0002224!2.86e-08!34;UBERON:0005181!4.72e-08!35;UBERON:0005153!1.19e-07!37;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38;UBERON:0003350!6.77e-07!5 | |ontology_enrichment_uberon=UBERON:0002171!1.33e-29!1;UBERON:0006518!1.33e-29!1;UBERON:0008949!1.33e-29!1;UBERON:0000101!1.33e-29!1;UBERON:0002167!1.33e-29!1;UBERON:0002048!2.09e-12!22;UBERON:0000117!2.09e-12!22;UBERON:0000171!2.09e-12!22;UBERON:0000170!2.09e-12!22;UBERON:0005597!2.09e-12!22;UBERON:0000118!2.09e-12!22;UBERON:0001242!2.61e-08!4;UBERON:0001262!2.61e-08!4;UBERON:0004786!2.61e-08!4;UBERON:0004808!2.61e-08!4;UBERON:0001277!2.61e-08!4;UBERON:0005178!2.86e-08!34;UBERON:0002224!2.86e-08!34;UBERON:0005181!4.72e-08!35;UBERON:0005153!1.19e-07!37;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38;UBERON:0003350!6.77e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.61e-34;1!UBERON:0006518;3.61e-34;1!UBERON:0008949;3.61e-34;1!UBERON:0000101;3.61e-34;1!UBERON:0002167;3.61e-34;1!UBERON:0002048;2.38e-14;22!UBERON:0000117;2.38e-14;22!UBERON:0000171;2.38e-14;22!UBERON:0000170;2.38e-14;22!UBERON:0005178;1.36e-08;34!UBERON:0002224;1.36e-08;34!UBERON:0000065;5.45e-07;44!UBERON:0005181;7.00e-07;35 | |ontology_enrichment_uberon_v019=UBERON:0002171;3.61e-34;1!UBERON:0006518;3.61e-34;1!UBERON:0008949;3.61e-34;1!UBERON:0000101;3.61e-34;1!UBERON:0002167;3.61e-34;1!UBERON:0002048;2.38e-14;22!UBERON:0000117;2.38e-14;22!UBERON:0000171;2.38e-14;22!UBERON:0000170;2.38e-14;22!UBERON:0005178;1.36e-08;34!UBERON:0002224;1.36e-08;34!UBERON:0000065;5.45e-07;44!UBERON:0005181;7.00e-07;35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.61e-34,1;UBERON:0006518,3.61e-34,1;UBERON:0008949,3.61e-34,1;UBERON:0000101,3.61e-34,1;UBERON:0002167,3.61e-34,1;UBERON:0002048,2.38e-14,22;UBERON:0000117,2.38e-14,22;UBERON:0000171,2.38e-14,22;UBERON:0000170,2.38e-14,22;UBERON:0005597,2.38e-14,22;UBERON:0000118,2.38e-14,22;UBERON:0005178,1.48e-09,34;UBERON:0002224,1.48e-09,34;UBERON:0005181,2.65e-09,35;UBERON:0005153,7.74e-09,37;UBERON:0008947,1.27e-08,38;UBERON:0003258,1.27e-08,38;UBERON:0005157,4.22e-07,47 | |||
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|short_description=p6@CLDN18 | |short_description=p6@CLDN18 | ||
}} | }} |
Latest revision as of 00:26, 25 September 2015
Short description: | p6@CLDN18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CLDN18_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 0bp_to_ENST00000536138_5end |
EntrezGene: | CLDN18 |
HGNC: | 2039 |
UniProt: | F5H193 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.61e-34 | 1 |
right lung lobe | 3.61e-34 | 1 |
lower lobe of lung | 3.61e-34 | 1 |
lobe of lung | 3.61e-34 | 1 |
right lung | 3.61e-34 | 1 |
lung | 2.38e-14 | 22 |
respiratory tube | 2.38e-14 | 22 |
respiration organ | 2.38e-14 | 22 |
pair of lungs | 2.38e-14 | 22 |
lung primordium | 2.38e-14 | 22 |
lung bud | 2.38e-14 | 22 |
thoracic cavity element | 1.48e-09 | 34 |
thoracic cavity | 1.48e-09 | 34 |
thoracic segment organ | 2.65e-09 | 35 |
epithelial bud | 7.74e-09 | 37 |
respiratory primordium | 1.27e-08 | 38 |
endoderm of foregut | 1.27e-08 | 38 |
epithelial fold | 4.22e-07 | 47 |