FFCP PHASE1:Hg19::chr9:127054288..127054311,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10783 | |EntrezGene=10783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |HGNC=7749 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBH2 | |UniProt=Q5TBH2 | ||
|association_with_transcript=30bp_to_ENST00000422297_5end | |association_with_transcript=30bp_to_ENST00000422297_5end | ||
|cluster_id=chr9:127054288..127054311,+ | |||
|coexpression_cluster_id=C4799 | |||
|description=CAGE_peak_8_at_NEK6_5end | |description=CAGE_peak_8_at_NEK6_5end | ||
|id=chr9:127054288..127054311,+ | |id=chr9:127054288..127054311,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.43e-50!112;CL:0000049!3.43e-50!112;CL:0000037!1.81e-48!172;CL:0000566!1.81e-48!172;CL:0000988!1.46e-47!182;CL:0002032!1.42e-43!165;CL:0000837!1.42e-43!165;CL:0000557!1.16e-38!71;CL:0000738!7.19e-36!140;CL:0000839!2.46e-35!70;CL:0000766!2.03e-34!76;CL:0002009!1.93e-31!65;CL:0002194!2.62e-29!63;CL:0000576!2.62e-29!63;CL:0000040!2.62e-29!63;CL:0000559!2.62e-29!63;CL:0002031!4.29e-29!124;CL:0002087!5.53e-25!119;CL:0002057!3.51e-23!42;CL:0000860!6.35e-21!45;CL:0000451!6.08e-14!10;CL:0000134!1.60e-13!358;CL:0002320!3.28e-13!365;CL:0000990!1.84e-11!8;CL:0000219!8.07e-11!390;CL:0000034!2.70e-10!444;CL:0000048!4.66e-10!430;CL:0000723!1.55e-09!436;CL:0002274!1.80e-08!5;CL:0000457!1.80e-08!5;CL:0002191!1.80e-08!5;CL:0000097!1.80e-08!5;CL:0000831!1.80e-08!5;CL:0002028!1.80e-08!5;CL:0000840!1.86e-08!5;CL:0001029!1.86e-08!5;CL:0000453!5.30e-07!5 | |ontology_enrichment_celltype=CL:0000763!3.43e-50!112;CL:0000049!3.43e-50!112;CL:0000037!1.81e-48!172;CL:0000566!1.81e-48!172;CL:0000988!1.46e-47!182;CL:0002032!1.42e-43!165;CL:0000837!1.42e-43!165;CL:0000557!1.16e-38!71;CL:0000738!7.19e-36!140;CL:0000839!2.46e-35!70;CL:0000766!2.03e-34!76;CL:0002009!1.93e-31!65;CL:0002194!2.62e-29!63;CL:0000576!2.62e-29!63;CL:0000040!2.62e-29!63;CL:0000559!2.62e-29!63;CL:0002031!4.29e-29!124;CL:0002087!5.53e-25!119;CL:0002057!3.51e-23!42;CL:0000860!6.35e-21!45;CL:0000451!6.08e-14!10;CL:0000134!1.60e-13!358;CL:0002320!3.28e-13!365;CL:0000990!1.84e-11!8;CL:0000219!8.07e-11!390;CL:0000034!2.70e-10!444;CL:0000048!4.66e-10!430;CL:0000723!1.55e-09!436;CL:0002274!1.80e-08!5;CL:0000457!1.80e-08!5;CL:0002191!1.80e-08!5;CL:0000097!1.80e-08!5;CL:0000831!1.80e-08!5;CL:0002028!1.80e-08!5;CL:0000840!1.86e-08!5;CL:0001029!1.86e-08!5;CL:0000453!5.30e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.05e-19;5!CL:0000473;5.22e-17;39!CL:0000234;5.22e-17;39!CL:0000860;1.04e-16;33!CL:0002057;1.04e-16;33!CL:0000451;1.32e-14;10!CL:0000766;3.64e-13;69!CL:0000763;5.64e-13;100!CL:0000576;1.13e-11;48!CL:0000875;3.86e-11;3!CL:0002396;3.86e-11;3!CL:0000784;5.20e-11;3!CL:0000163;1.83e-10;9!CL:0000990;2.01e-09;8!CL:0000840;3.36e-09;5!CL:0000738;3.63e-08;136!CL:0001014;8.03e-08;2!CL:0001016;8.03e-08;2!CL:0000453;6.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.08e-48,108;CL:0000049,2.08e-48,108;CL:0000037,6.04e-45,168;CL:0002032,4.65e-43,161;CL:0000837,4.65e-43,161;CL:0000988,4.06e-42,177;CL:0000557,6.15e-39,67;CL:0000839,1.87e-31,66;CL:0000738,3.32e-30,136;CL:0002031,2.78e-29,120;CL:0000766,2.66e-28,72;CL:0002009,6.21e-26,61;CL:0000473,7.24e-24,48;CL:0000234,7.24e-24,48;CL:0002194,2.65e-22,59;CL:0000576,2.65e-22,59;CL:0000040,2.65e-22,59;CL:0000559,2.65e-22,59;CL:0000860,2.07e-19,42;CL:0002057,2.07e-19,42;CL:0000097,3.91e-19,5;CL:0002028,3.91e-19,5;CL:0002087,3.31e-18,115;CL:0000134,1.56e-16,354;CL:0002320,5.38e-16,361;CL:0000451,1.38e-14,10;CL:0000219,4.21e-14,386;CL:0000034,1.56e-13,441;CL:0000048,1.32e-12,427;CL:0000723,2.85e-12,433;CL:0000875,4.14e-11,3;CL:0002396,4.14e-11,3;CL:0000784,4.44e-11,3;CL:0000163,1.80e-10,9;CL:0000990,2.13e-09,8;CL:0000840,3.41e-09,5;CL:0001029,3.41e-09,5;CL:0001014,9.75e-08,2;CL:0001016,9.75e-08,2;CL:0000453,7.37e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000049;4.75e-18;108!CL:0002057;8.62e-15;42 | |||
|ontology_enrichment_disease=DOID:8692!3.27e-09!31;DOID:1240!3.99e-08!39;DOID:2531!2.09e-07!51;DOID:0060083!2.09e-07!51 | |ontology_enrichment_disease=DOID:8692!3.27e-09!31;DOID:1240!3.99e-08!39;DOID:2531!2.09e-07!51;DOID:0060083!2.09e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.38e-11;31!DOID:1240;1.25e-08;39!DOID:2531;4.15e-07;51!DOID:0060083;4.15e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.01e-12,31;DOID:1240,2.17e-09,39;DOID:2531,5.10e-08,51;DOID:0060083,5.10e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.32e-34!80;UBERON:0002390!2.82e-33!102;UBERON:0003061!2.82e-33!102;UBERON:0002193!4.75e-32!112;UBERON:0001474!3.00e-30!86;UBERON:0002405!1.89e-26!115;UBERON:0004765!3.68e-23!101;UBERON:0001434!3.68e-23!101;UBERON:0002384!1.44e-12!375;UBERON:0002204!6.92e-12!167;UBERON:0003081!3.72e-10!216 | |ontology_enrichment_uberon=UBERON:0002371!7.32e-34!80;UBERON:0002390!2.82e-33!102;UBERON:0003061!2.82e-33!102;UBERON:0002193!4.75e-32!112;UBERON:0001474!3.00e-30!86;UBERON:0002405!1.89e-26!115;UBERON:0004765!3.68e-23!101;UBERON:0001434!3.68e-23!101;UBERON:0002384!1.44e-12!375;UBERON:0002204!6.92e-12!167;UBERON:0003081!3.72e-10!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-33,76;UBERON:0001474,1.60e-30,82;UBERON:0002405,3.24e-28,93;UBERON:0004765,3.56e-27,90;UBERON:0002390,2.13e-26,98;UBERON:0003061,2.13e-26,98;UBERON:0001434,9.71e-24,100;UBERON:0002193,2.89e-23,108;UBERON:0002384,2.91e-15,371;UBERON:0002204,2.11e-12,167;UBERON:0003081,7.91e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,4.89045796786888,3.85872770414745,3.7781175030566,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0,0,0.587200878669695,0,0.401088894940283,0.217010870715852,0.223915474239924,0.647787332037959,0.257575567634187,1.30858414901608,5.66813915533214,3.63876091781724,0.929716147622738,5.34518254428373,0.309706370895104,0.575384784644301,0.768482119587302,1.89185783910868,0,1.29096936716765,1.35426486594342,0.376484679085209,1.91034305040492,2.69668181334102,0.306083892370903,1.28371610830437,0.639337125799041,0.329851300186716,1.59570926097305,1.70489900213078,0,0,0.622822248995575,0.502497330513487,1.0429658368404,1.3031330682307,0,0,0,0.845021145247767,0.425208599930087,0,0,0,0,3.13514018115373,1.39241674039363,2.55729815270488,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,1.76171156811282,0.764546456250458,2.64342657158052,2.80254281490768,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0.0654895377488563,0,0,0.649094787309367,1.56716763569341,0.930705723632056,1.66943437013739,2.85997455390064,2.22874500797739,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,2.21595305478658,0.936017060556951,0.594524649154913,0,0,0,0,0,0,3.4486426652716,10.91800581764,4.56121854189699,6.91775776401415,7.82703087243556,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,6.52934218861764,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0.984043937099117,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,5.58822240011887,27.1937625587961,14.393803625224,8.44017044713844,12.0742786588787,0.912938716132769,0.156679895773023,2.50634477090067,0.169291777801603,0,0.403599414382095,0,4.46556948182494,0,0,0.333698283423817,3.51698571723673,0,0,12.9818725668472,5.32915148796512,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,6.27732507851454,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0.104421949505455,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,2.55493176133945,0,0.788662062837943,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0,0,1.349843349309,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,5.0663680298241,0.132864840313363,0.981392365535065,0,0,0,0.59996218756479,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,7.72067716623721,0,0.0679697329768317,0.263091094251396,0,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0.0939839179798536,0,5.49676357587109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0.322944549180031,0.124149428591716,0,0,0,0,0,0.606168477131288,0,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,6.73193833836789 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,4.89045796786888,3.85872770414745,3.7781175030566,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0,0,0.587200878669695,0,0.401088894940283,0.217010870715852,0.223915474239924,0.647787332037959,0.257575567634187,1.30858414901608,5.66813915533214,3.63876091781724,0.929716147622738,5.34518254428373,0.309706370895104,0.575384784644301,0.768482119587302,1.89185783910868,0,1.29096936716765,1.35426486594342,0.376484679085209,1.91034305040492,2.69668181334102,0.306083892370903,1.28371610830437,0.639337125799041,0.329851300186716,1.59570926097305,1.70489900213078,0,0,0.622822248995575,0.502497330513487,1.0429658368404,1.3031330682307,0,0,0,0.845021145247767,0.425208599930087,0,0,0,0,3.13514018115373,1.39241674039363,2.55729815270488,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,1.76171156811282,0.764546456250458,2.64342657158052,2.80254281490768,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0.0654895377488563,0,0,0.649094787309367,1.56716763569341,0.930705723632056,1.66943437013739,2.85997455390064,2.22874500797739,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,2.21595305478658,0.936017060556951,0.594524649154913,0,0,0,0,0,0,3.4486426652716,10.91800581764,4.56121854189699,6.91775776401415,7.82703087243556,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,6.52934218861764,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0.984043937099117,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,5.58822240011887,27.1937625587961,14.393803625224,8.44017044713844,12.0742786588787,0.912938716132769,0.156679895773023,2.50634477090067,0.169291777801603,0,0.403599414382095,0,4.46556948182494,0,0,0.333698283423817,3.51698571723673,0,0,12.9818725668472,5.32915148796512,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,6.27732507851454,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0.104421949505455,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,2.55493176133945,0,0.788662062837943,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0,0,1.349843349309,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,5.0663680298241,0.132864840313363,0.981392365535065,0,0,0,0.59996218756479,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,7.72067716623721,0,0.0679697329768317,0.263091094251396,0,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0.0939839179798536,0,5.49676357587109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0.322944549180031,0.124149428591716,0,0,0,0,0,0.606168477131288,0,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,6.73193833836789 | ||
|short_description=p8@NEK6 | |short_description=p8@NEK6 | ||
}} | }} |
Latest revision as of 00:18, 25 September 2015
Short description: | p8@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NEK6_5end |
Coexpression cluster: | C4799_Mast_acute_Monocytederived_xeroderma_plasma_b_migratory |
Association with transcript: | 30bp_to_ENST00000422297_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q5TBH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-33 | 76 |
bone element | 1.60e-30 | 82 |
immune system | 3.24e-28 | 93 |
skeletal element | 3.56e-27 | 90 |
hematopoietic system | 2.13e-26 | 98 |
blood island | 2.13e-26 | 98 |
skeletal system | 9.71e-24 | 100 |
hemolymphoid system | 2.89e-23 | 108 |
connective tissue | 2.91e-15 | 371 |
musculoskeletal system | 2.11e-12 | 167 |
lateral plate mesoderm | 7.91e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.01e-12 | 31 |
leukemia | 2.17e-09 | 39 |
hematologic cancer | 5.10e-08 | 51 |
immune system cancer | 5.10e-08 | 51 |