FFCP PHASE1:Hg19::chr12:79845142..79845155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6857 | |EntrezGene=6857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11509 | |HGNC=11509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=298bp_to_U19921_5end | |association_with_transcript=298bp_to_U19921_5end | ||
|cluster_id=chr12:79845142..79845155,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_22_at_SYT1_5end | |description=CAGE_peak_22_at_SYT1_5end | ||
|id=chr12:79845142..79845155,+ | |id=chr12:79845142..79845155,+ | ||
|ontology_enrichment_celltype=CL:0000242!4.73e-07!2 | |ontology_enrichment_celltype=CL:0000242!4.73e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!6.27e-07!4 | |ontology_enrichment_disease=DOID:5409!6.27e-07!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p22@SYT1 | |short_description=p22@SYT1 | ||
}} | }} |
Latest revision as of 00:16, 25 September 2015
Short description: | p22@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SYT1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 298bp_to_U19921_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.49e-79 | 2 |
neocortex | 1.13e-30 | 20 |
regional part of cerebral cortex | 4.37e-28 | 22 |
gyrus | 2.72e-27 | 6 |
cerebral cortex | 6.01e-25 | 25 |
pallium | 6.01e-25 | 25 |
temporal lobe | 1.44e-23 | 6 |
regional part of telencephalon | 7.79e-20 | 32 |
cerebral hemisphere | 7.79e-20 | 32 |
brain grey matter | 9.52e-19 | 34 |
gray matter | 9.52e-19 | 34 |
telencephalon | 9.52e-19 | 34 |
regional part of forebrain | 9.39e-16 | 41 |
forebrain | 9.39e-16 | 41 |
anterior neural tube | 9.39e-16 | 41 |
future forebrain | 9.39e-16 | 41 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.04e-12 | 53 |
regional part of brain | 2.04e-12 | 53 |
neural tube | 8.46e-12 | 56 |
neural rod | 8.46e-12 | 56 |
future spinal cord | 8.46e-12 | 56 |
neural keel | 8.46e-12 | 56 |
nervous system | 2.13e-11 | 89 |
pre-chordal neural plate | 6.67e-11 | 61 |
parietal lobe | 2.74e-09 | 5 |
occipital lobe | 3.22e-09 | 5 |
neural plate | 2.64e-08 | 82 |
presumptive neural plate | 2.64e-08 | 82 |
neurectoderm | 5.98e-08 | 86 |