FFCP PHASE1:Hg19::chr19:1036434..1036457,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:1036434..1036457,+
|short_description=p2@CNN2
|description=CAGE_peak_2_at_CNN2_5end
|association_with_transcript=-340bp_to_AK093630_5end
|EntrezGene=1265...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1265 | |EntrezGene=1265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2156 | |HGNC=2156 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-340bp_to_AK093630_5end | |||
|cluster_id=chr19:1036434..1036457,+ | |||
|coexpression_cluster_id=C2473 | |||
|description=CAGE_peak_2_at_CNN2_5end | |||
|id=chr19:1036434..1036457,+ | |||
|ontology_enrichment_celltype=CL:0000144!8.06e-23!625;CL:0002371!6.89e-21!591;CL:0000548!1.95e-19!679;CL:0000004!1.95e-19!679;CL:0000255!1.95e-19!679;CL:0000012!8.37e-19!682;CL:0000003!1.10e-17!722;CL:0000055!1.60e-09!180;CL:0000034!6.53e-09!444;CL:0000048!7.37e-09!430;CL:0000063!1.91e-08!578;CL:0000723!2.05e-08!436;CL:0002321!1.02e-07!248;CL:0000220!2.05e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.43e-08,441;CL:0000048,2.20e-08,427;CL:0000723,3.72e-08,433;CL:0002321,4.75e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@CNN2 | |||
}} | }} |
Latest revision as of 00:08, 25 September 2015
Short description: | p2@CNN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNN2_5end |
Coexpression cluster: | C2473_Hair_Alveolar_Aortic_Astrocyte_Mesenchymal_Neutrophils_Prostate |
Association with transcript: | -340bp_to_AK093630_5end |
EntrezGene: | CNN2 |
HGNC: | 2156 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.43e-08 | 441 |
multi fate stem cell | 2.20e-08 | 427 |
somatic stem cell | 3.72e-08 | 433 |
embryonic cell | 4.75e-08 | 250 |