FFCP PHASE1:Hg19::chrX:38420783..38420805,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:38420783..38420805,+ to FFCP PHASE1:Hg19::chrX:38420783..38420805,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7102 | |EntrezGene=7102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11854 | |HGNC=11854 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDG0,B4DEA5,F8WF53,F8WC96,F8WF47,B4DEB8 | |UniProt=B4DDG0,B4DEA5,F8WF53,F8WC96,F8WF47,B4DEB8 | ||
|association_with_transcript=0bp_to_ENST00000286824,ENST00000422612,ENST00000471410,ENST00000475216,ENST00000480976,ENST00000545599_5end | |||
|cluster_id=chrX:38420783..38420805,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_TSPAN7_5end | |||
|id=chrX:38420783..38420805,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.01e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-48!115;UBERON:0005743!4.54e-39!86;UBERON:0001017!1.55e-38!82;UBERON:0000073!1.95e-38!94;UBERON:0001016!1.95e-38!94;UBERON:0001049!1.60e-34!57;UBERON:0005068!1.60e-34!57;UBERON:0006241!1.60e-34!57;UBERON:0007135!1.60e-34!57;UBERON:0000955!9.44e-32!69;UBERON:0006238!9.44e-32!69;UBERON:0002616!7.23e-30!59;UBERON:0003075!2.69e-29!86;UBERON:0007284!2.69e-29!86;UBERON:0002346!6.38e-29!90;UBERON:0003080!3.69e-28!42;UBERON:0002780!1.15e-27!41;UBERON:0001890!1.15e-27!41;UBERON:0006240!1.15e-27!41;UBERON:0000924!5.68e-25!173;UBERON:0006601!5.68e-25!173;UBERON:0004121!7.05e-25!169;UBERON:0000153!1.25e-23!129;UBERON:0007811!1.25e-23!129;UBERON:0000033!3.02e-23!123;UBERON:0001893!5.07e-23!34;UBERON:0003056!6.23e-23!61;UBERON:0002020!7.31e-23!34;UBERON:0003528!7.31e-23!34;UBERON:0002791!2.88e-22!33;UBERON:0001869!6.25e-22!32;UBERON:0002619!2.15e-17!22;UBERON:0000956!5.70e-17!25;UBERON:0000203!5.70e-17!25;UBERON:0001950!4.96e-16!20;UBERON:0004111!8.48e-16!241;UBERON:0000025!6.99e-15!194;UBERON:0000477!1.37e-12!286;UBERON:0000119!1.12e-11!312;UBERON:0000483!1.66e-11!309;UBERON:0000922!7.95e-09!612;UBERON:0000064!1.02e-08!219;UBERON:0003076!1.22e-07!15;UBERON:0003057!1.22e-07!15;UBERON:0002420!1.50e-07!9;UBERON:0007245!1.50e-07!9;UBERON:0010009!1.50e-07!9;UBERON:0010011!1.50e-07!9;UBERON:0000454!1.50e-07!9;UBERON:0000480!1.69e-07!626;UBERON:0000468!1.95e-07!659;UBERON:0000481!2.04e-07!347;UBERON:0000467!2.24e-07!625;UBERON:0002308!2.40e-07!9;UBERON:0000125!2.40e-07!9;UBERON:0002050!2.47e-07!605;UBERON:0005423!2.47e-07!605;UBERON:0000923!4.04e-07!604;UBERON:0005291!4.04e-07!604;UBERON:0006598!4.04e-07!604;UBERON:0002532!4.04e-07!604;UBERON:0000475!4.87e-07!365;UBERON:0001871!7.96e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.46e-22;41!UBERON:0001890;1.46e-22;41!UBERON:0001869;1.99e-22;32!UBERON:0001893;2.28e-22;34!UBERON:0003528;3.18e-22;34!UBERON:0002020;3.18e-22;34!UBERON:0002791;3.47e-22;32!UBERON:0000073;1.23e-20;53!UBERON:0002616;1.23e-20;53!UBERON:0002619;1.19e-19;22!UBERON:0000956;4.01e-19;25!UBERON:0000203;4.01e-19;25!UBERON:0001950;4.32e-18;20!UBERON:0001017;6.04e-16;75!UBERON:0000955;2.06e-15;68!UBERON:0007023;3.38e-15;114!UBERON:0001016;2.21e-14;83!UBERON:0002420;2.09e-08;9!UBERON:0007245;2.09e-08;9!UBERON:0010009;2.09e-08;9!UBERON:0010011;2.09e-08;9!UBERON:0000454;2.09e-08;9!UBERON:0000125;3.58e-08;9!UBERON:0002308;3.58e-08;9!UBERON:0011216;4.05e-07;132!UBERON:0009663;7.79e-07;7!UBERON:0001871;8.46e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.06e-55,114;UBERON:0001017,5.54e-41,81;UBERON:0001016,9.02e-41,89;UBERON:0001049,6.29e-38,56;UBERON:0005068,6.29e-38,56;UBERON:0006241,6.29e-38,56;UBERON:0007135,6.29e-38,56;UBERON:0000073,8.41e-36,53;UBERON:0002616,8.41e-36,53;UBERON:0000955,2.64e-33,68;UBERON:0006238,2.64e-33,68;UBERON:0002780,2.20e-31,41;UBERON:0001890,2.20e-31,41;UBERON:0003080,2.20e-31,41;UBERON:0006240,2.20e-31,41;UBERON:0003075,2.30e-31,82;UBERON:0007284,2.30e-31,82;UBERON:0011216,3.70e-30,223;UBERON:0002346,4.17e-30,86;UBERON:0001893,4.49e-26,34;UBERON:0003528,6.83e-26,34;UBERON:0002020,6.83e-26,34;UBERON:0004121,1.99e-25,171;UBERON:0000924,1.99e-25,171;UBERON:0006601,1.99e-25,171;UBERON:0003056,2.63e-25,61;UBERON:0001869,7.94e-25,32;UBERON:0002791,1.66e-24,32;UBERON:0010371,1.43e-23,104;UBERON:0002619,1.21e-19,22;UBERON:0000956,3.70e-19,25;UBERON:0000203,3.70e-19,25;UBERON:0004111,3.47e-18,240;UBERON:0001950,4.39e-18,20;UBERON:0000025,3.64e-17,192;UBERON:0010314,1.17e-16,132;UBERON:0000483,2.44e-11,306;UBERON:0000119,4.31e-11,309;UBERON:0000922,4.10e-09,592;UBERON:0002420,2.11e-08,9;UBERON:0007245,2.11e-08,9;UBERON:0010009,2.11e-08,9;UBERON:0010011,2.11e-08,9;UBERON:0000454,2.11e-08,9;UBERON:0000125,3.61e-08,9;UBERON:0002308,3.61e-08,9;UBERON:0002050,5.16e-08,564;UBERON:0005423,5.17e-08,581;UBERON:0003076,6.30e-08,15;UBERON:0003057,6.30e-08,15;UBERON:0000923,7.29e-08,560;UBERON:0010316,7.29e-08,560;UBERON:0005291,7.29e-08,560;UBERON:0006598,7.29e-08,560;UBERON:0010317,7.29e-08,560;UBERON:0002532,7.29e-08,560;UBERON:0009663,7.85e-07,7;UBERON:0001871,8.53e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,1.04474251279935,0.245733936501509,0,0,0.791300934685361,0,0,0,0,0,0,2.95490539384291,0,0.940364164434263,5.15224776835902,1.36874425072884,1.75759695432724,0,0.0821005894499457,0,0,0,7.58599004248772,3.67768489791571,2.10844143144775,3.69754010166788,0,0,3.22960483268332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6863920421339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90810750907073,0,0,0.382273228125229,6.60856642895129,0,2.37045676297569,0.786839080455332,0,0,0,0,1.4203434172042,1.94826728407911,0,0,0.443067789167242,0,0,0,0,0,0,0.296573126324121,0,1.04535523804977,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,1.2786256184353,0,0,0,0,0,4.25406677238305,1.77383517970051,2.63504357079378,128.686941676503,2.18577172975525,1.11235332835329,3.24547393654683,3.48259474598534,5.58423434179234,0,0,0,19.0811911072037,7.74211135595512,4.85996702250632,19.7857779673403,13.8434813949269,5.50236083880135,4.38889429727302,8.0109195342492,21.3459757612026,6.02497102976406,6.44526907374635,22.8081631715554,10.9827925896676,2.20597848207521,3.24056779152704,10.7159673940896,7.18493992403743,5.63057402416611,0,2.84779697870439,2.5648244150257,0,0,3.48875241714027,0,0,0,0,1.06400514659507,0,0,0.24666754841716,0.933633106199299,0.404132016209064,0,1.81628913173918,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63592278423804,8.0843158676106,9.99267908677858,10.4697665565524,8.32658807889574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.1945709144761,4.20725321410337,0.8231480226628,1.47008711385542,2.53510069643662,0,36.0381843075657,17.658523976586,10.4540172761647,1.71567810298526,5.81676512665715,0,1.10581869652794,9.9995520771212,0,0,1.44331342025273,15.5346742666603,1.87853910777315,5.05282567163758,8.7967247389556,21.8792275069788,0,0,0,0.234004265139238,0.743155811443641,5.62403003920662,0.839910640994298,0.708875486211932,0.179117045405697,0.290633938513962,0.383382679165211,1.47798971368783,2.11316241631742,25.7086863270557,23.7797923137986,9.21569764012574,0.126995788584338,0,0,11.9750712215894,2.15937734676979,0,0.571652865261156,0.784917590417525,0.43596006883328,1.54010400223995,2.45616259939778,0,0.845302752556,0,0,1.80045161983499,0,1.3321108950805,0,0,0,0.65147236858747,0,0,27.4309833124223,13.9445353376047,22.0940310512346,0,0,0,0,0,1.42636905040718,0.579125226670317,0,0.358121926479791,0,0,0,0.128343036279748,28.4585979129159,83.2895064688779,75.0090148394364,126.474780327433,87.3976089764834,0,0,0,0.24538298343828,0,0,0,0,0,0,3.31040709700491,40.9333507300773,6.2083842775503,0,0.737476674166813,0,4.11182430671755,4.46086450954113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0,0,0.464841513839837,3.14234568938218,1.00253235151642,0.644566922551274,0,0,0.262248829918848,1.35359883872224,1.46329140498388,0,0,1.68882606228601,3.4120015221269,0.510281115829547,2.15915916102139,10.7959076883203,0.812839312631559,1.50506932156456,1.01950509218015,0,0.447749509444357,0,0,3.33385162651306,0.984043937099117,1.62689197332152,40.4951175775549,3.93748698718877,4.1254749960294,0,0,0,1.83674364755032,0.616194468458578,1.22802939780904,0.275673144969061,0.429680979473094,1.45016693914229,1.19317278382541,12.8206131331302,0.495854746082934,0.384380134730212,0.638063562472921,1.71968227454435,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,1.48863347743867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,1.31178950409327,0,1.239293992399,0,0,0,0,0.709522128141196,0,0,0,0,2.98288549449087,6.03272047982209,2.17781969722645,41.8939913456667,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.490080431962063,0,2.8853842595289,15.0820707898638,258.429988093421,0,8.80924702608887,0.211673582723883,7.14168268604022,1.12318871245384,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,1.39203086947621,0,0,0,0,0,87.025858487505,0,0,0,0,12.1755519141382,0,535.845582146035,251.516916541997,0.111308705022906,0,54.6814807051503,40.2480936267161,25.6944041443967,114.629400273696,18.1015568028814,0.246169610922139,0,0,12.5314822272926,0,34.5251919729268,0,0,512.777022684371,609.393636825201,269.478627301612,0,0,46.3999728278268,11.0379644836935,0,0.236387681767936,42.0586915354587,41.1162504870389,48.4413735863885,539.416503960628,513.258442789736,425.703044324662,359.050856996686,347.859547508325,257.119685464456,0,4.0432885840795,68.639630585387,0,0.23056390438806,0.0897576444097721,0.108647371922008,4.78501739597879,0.0915975934018623,9.06159119231679,98.105566267907,0,0,0,0,0,0,0,8.86191871017714,0,0.565412285735763,120.312083696603,55.7346681403963,32.2870110437188,34.217688116283,0,0,0.208843899010911,119.771813306663,45.746925896031,332.421248484256,0,0,0,31.5667522279512,42.3467506170324,143.5481252047,43.093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| ||
|short_description=p1@TSPAN7 | |||
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Latest revision as of 00:04, 25 September 2015
Short description: | p1@TSPAN7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSPAN7_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000286824, ENST00000422612, ENST00000471410, ENST00000475216, ENST00000480976, ENST00000545599_5end |
EntrezGene: | TSPAN7 |
HGNC: | 11854 |
UniProt: | B4DDG0B4DEA5F8WF53F8WC96F8WF47B4DEB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data