FFCP PHASE1:Hg19::chr20:2795609..2795620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100288797,128653 | |EntrezGene=100288797,128653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16134,40044 | |HGNC=16134,40044 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZPB1,Q8WW34 | |UniProt=Q6ZPB1,Q8WW34 | ||
|association_with_transcript=0bp_to_ENST00000380593,ENST00000554164,uc002wgv.1,uc010gat.2_5end | |association_with_transcript=0bp_to_ENST00000380593,ENST00000554164,uc002wgv.1,uc010gat.2_5end | ||
|cluster_id=chr20:2795609..2795620,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_C20orf141_5end,CAGE_peak_3_at_TMEM239_5end | |description=CAGE_peak_2_at_C20orf141_5end,CAGE_peak_3_at_TMEM239_5end | ||
|id=chr20:2795609..2795620,+ | |id=chr20:2795609..2795620,+ | ||
|ontology_enrichment_celltype=CL:0000499!2.35e-09!27;CL:0002602!7.02e-09!2 | |ontology_enrichment_celltype=CL:0000499!2.35e-09!27;CL:0002602!7.02e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.57e-09;6!CL:0002255;1.57e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.57e-09,6;CL:0002255,1.57e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease=DOID:3908!2.69e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0009568!7.02e-09!2;UBERON:0002216!7.02e-09!2;UBERON:0002209!7.02e-09!2;UBERON:0002213!7.02e-09!2;UBERON:0004267!7.02e-09!2;UBERON:0006444!7.02e-09!2;UBERON:0001995!7.02e-09!2;UBERON:0004715!7.02e-09!2;UBERON:0001468!7.02e-09!2;UBERON:0001130!7.02e-09!2;UBERON:0001066!7.02e-09!2 | |ontology_enrichment_uberon=UBERON:0009568!7.02e-09!2;UBERON:0002216!7.02e-09!2;UBERON:0002209!7.02e-09!2;UBERON:0002213!7.02e-09!2;UBERON:0004267!7.02e-09!2;UBERON:0006444!7.02e-09!2;UBERON:0001995!7.02e-09!2;UBERON:0004715!7.02e-09!2;UBERON:0001468!7.02e-09!2;UBERON:0001130!7.02e-09!2;UBERON:0001066!7.02e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003133;2.10e-10;44!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0003133,3.42e-10,48;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,5.43563163315507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434589487688032,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,1.42304773014896,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,12.8065999988825,11.2544934665595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@C20orf141,p3@TMEM239 | |short_description=p2@C20orf141,p3@TMEM239 | ||
}} | }} |
Latest revision as of 00:01, 25 September 2015
Short description: | p2@C20orf141, p3@TMEM239 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C20orf141_5end, CAGE_peak_3_at_TMEM239_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000380593, ENST00000554164, uc002wgv.1, uc010gat.2_5end |
EntrezGene: | 100288797,128653 |
HGNC: | 40044&submit=Submit 16134, 40044 |
UniProt: | Q6ZPB1Q8WW34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.57e-09 | 6 |
stromal cell of endometrium | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
reproductive organ | 3.42e-10 | 48 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.57e-09 | 6 |