FFCP PHASE2:Hg19::chr2:223536339..223536352,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:116255 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18210 |TSScl...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=116255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18210 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96PD6 | ||
|association_with_transcript=-104bp_to_NM_058165,uc010fws.1_5end | |association_with_transcript=-104bp_to_NM_058165,uc010fws.1_5end | ||
|cluster_id=chr2:223536339..223536352,+ | |cluster_id=chr2:223536339..223536352,+ | ||
Latest revision as of 23:44, 24 September 2015
| Short description: | p2@MOGAT1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_MOGAT1_5end |
| Coexpression cluster: | C4193_gall_signet_Hepatocyte_Adipocyte_hepatocellular_mature_kidney |
| Association with transcript: | -104bp_to_NM_058165, uc010fws.1_5end |
| EntrezGene: | MOGAT1 |
| HGNC: | 18210 |
| UniProt: | Q96PD6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@MOGAT1 |
|---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 3.95e-27 | 12 |
| fat cell | 7.83e-15 | 15 |
| serous secreting cell | 2.08e-10 | 1 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelium of foregut-midgut junction | 2.21e-17 | 25 |
| anatomical boundary | 2.21e-17 | 25 |
| hepatobiliary system | 2.21e-17 | 25 |
| foregut-midgut junction | 2.21e-17 | 25 |
| septum transversum | 2.21e-17 | 25 |
| liver | 5.30e-17 | 19 |
| digestive gland | 5.30e-17 | 19 |
| liver bud | 5.30e-17 | 19 |
| hepatic diverticulum | 1.25e-14 | 22 |
| liver primordium | 1.25e-14 | 22 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| ovary epithelial cancer | 2.08e-10 | 1 |
Showing 1 to 1 of 1 entries
