FFCP PHASE1:Hg19::chr1:2126192..2126218,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:2126192..2126218,-
|short_description=p1@C1orf86
|description=CAGE_peak_1_at_C1orf86_5end
|association_with_transcript=0bp_to_ENST00000378546,ENST000004142...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=199990 | |EntrezGene=199990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26428 | |HGNC=26428 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NZ36 | |UniProt=Q6NZ36 | ||
|association_with_transcript=0bp_to_ENST00000378546,ENST00000414253,NM_182533,uc001aiv.1,uc001aiw.1,uc001aiy.2_5end | |||
|cluster_id=chr1:2126192..2126218,- | |||
|coexpression_cluster_id=C3937 | |||
|description=CAGE_peak_1_at_C1orf86_5end | |||
|id=chr1:2126192..2126218,- | |||
|ontology_enrichment_celltype=CL:0002321!8.23e-17!248;CL:0000220!1.28e-16!246;CL:0000055!3.10e-14!180;CL:0000183!6.79e-13!59;CL:0000222!7.43e-12!119;CL:0000393!9.04e-12!60;CL:0000211!9.04e-12!60;CL:0000187!1.46e-10!54;CL:0000680!2.27e-10!57;CL:0000056!2.27e-10!57;CL:0000355!2.27e-10!57;CL:0000144!9.07e-10!625;CL:0002371!1.43e-09!591;CL:0000012!4.27e-09!682;CL:0000192!5.34e-09!42;CL:0000514!5.34e-09!42;CL:0000548!5.58e-09!679;CL:0000004!5.58e-09!679;CL:0000255!5.58e-09!679;CL:0000133!6.07e-07!59;CL:0000359!7.48e-07!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.25e-17,250;CL:0000222,3.14e-12,121;CL:0000393,7.47e-12,61;CL:0000211,7.47e-12,61;CL:0000187,1.21e-10,55;CL:0000680,1.86e-10,58;CL:0000056,1.86e-10,58;CL:0000355,1.86e-10,58;CL:0000192,4.48e-09,43;CL:0000514,4.48e-09,43;CL:0000133,6.07e-07,59;CL:0000359,7.48e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.27e-11!143;UBERON:0004290!1.22e-10!70;UBERON:0000486!2.06e-10!82;UBERON:0001134!1.57e-09!61;UBERON:0002036!1.57e-09!61;UBERON:0003082!1.57e-09!61;UBERON:0000914!1.67e-09!83;UBERON:0002329!1.67e-09!83;UBERON:0003077!1.67e-09!83;UBERON:0003059!1.67e-09!83;UBERON:0007282!1.67e-09!83;UBERON:0009618!1.67e-09!83;UBERON:0007285!1.67e-09!83;UBERON:0002100!2.32e-09!216;UBERON:0000490!6.14e-09!138;UBERON:0002385!1.42e-08!63;UBERON:0001015!1.42e-08!63;UBERON:0000383!1.42e-08!63;UBERON:0003104!2.34e-08!238;UBERON:0009142!2.34e-08!238;UBERON:0002049!3.67e-08!79;UBERON:0007798!3.67e-08!79;UBERON:0005085!2.35e-07!29;UBERON:0000019!5.62e-07!19;UBERON:0000047!5.62e-07!19;UBERON:0004088!5.62e-07!19;UBERON:0003072!5.62e-07!19;UBERON:0003071!5.62e-07!19;UBERON:0004128!5.62e-07!19;UBERON:0001456!7.78e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;5.10e-07;19!UBERON:0000047;5.10e-07;19!UBERON:0004088;5.10e-07;19!UBERON:0010230;5.10e-07;19!UBERON:0001456;7.31e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.98e-13,78;UBERON:0003104,7.38e-13,160;UBERON:0009142,7.38e-13,160;UBERON:0002329,9.88e-11,71;UBERON:0003059,9.88e-11,71;UBERON:0007282,9.88e-11,71;UBERON:0004290,9.88e-11,71;UBERON:0009618,9.88e-11,71;UBERON:0007524,1.24e-10,73;UBERON:0005256,1.56e-10,122;UBERON:0000486,1.65e-10,83;UBERON:0003077,2.91e-10,72;UBERON:0007285,2.91e-10,72;UBERON:0002100,3.49e-10,199;UBERON:0000490,3.94e-10,148;UBERON:0001134,1.27e-09,62;UBERON:0002036,1.27e-09,62;UBERON:0003082,1.27e-09,62;UBERON:0002385,1.14e-08,64;UBERON:0001015,1.14e-08,64;UBERON:0000383,1.14e-08,64;UBERON:0002049,6.44e-08,78;UBERON:0007798,6.44e-08,78;UBERON:0005085,7.63e-07,31 | |||
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| ||
|short_description=p1@C1orf86 | |||
}} | }} |
Latest revision as of 23:44, 24 September 2015
Short description: | p1@C1orf86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf86_5end |
Coexpression cluster: | C3937_Mesenchymal_Renal_Alveolar_Pericytes_Placental_Fibroblast_Osteoblast |
Association with transcript: | 0bp_to_ENST00000378546, ENST00000414253, NM_182533, uc001aiv.1, uc001aiw.1, uc001aiy.2_5end |
EntrezGene: | C1orf86 |
HGNC: | 26428 |
UniProt: | Q6NZ36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.25e-17 | 250 |
mesodermal cell | 3.14e-12 | 121 |
electrically responsive cell | 7.47e-12 | 61 |
electrically active cell | 7.47e-12 | 61 |
muscle cell | 1.21e-10 | 55 |
muscle precursor cell | 1.86e-10 | 58 |
myoblast | 1.86e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-10 | 58 |
smooth muscle cell | 4.48e-09 | 43 |
smooth muscle myoblast | 4.48e-09 | 43 |
neurectodermal cell | 6.07e-07 | 59 |
vascular associated smooth muscle cell | 7.48e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.98e-13 | 78 |
mesenchyme | 7.38e-13 | 160 |
entire embryonic mesenchyme | 7.38e-13 | 160 |
somite | 9.88e-11 | 71 |
presomitic mesoderm | 9.88e-11 | 71 |
presumptive segmental plate | 9.88e-11 | 71 |
dermomyotome | 9.88e-11 | 71 |
trunk paraxial mesoderm | 9.88e-11 | 71 |
dense mesenchyme tissue | 1.24e-10 | 73 |
trunk mesenchyme | 1.56e-10 | 122 |
multilaminar epithelium | 1.65e-10 | 83 |
paraxial mesoderm | 2.91e-10 | 72 |
presumptive paraxial mesoderm | 2.91e-10 | 72 |
trunk | 3.49e-10 | 199 |
unilaminar epithelium | 3.94e-10 | 148 |
skeletal muscle tissue | 1.27e-09 | 62 |
striated muscle tissue | 1.27e-09 | 62 |
myotome | 1.27e-09 | 62 |
muscle tissue | 1.14e-08 | 64 |
musculature | 1.14e-08 | 64 |
musculature of body | 1.14e-08 | 64 |
vasculature | 6.44e-08 | 78 |
vascular system | 6.44e-08 | 78 |
ectodermal placode | 7.63e-07 | 31 |