FFCP PHASE1:Hg19::chr6:136172786..136172816,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27115 | |EntrezGene=27115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8792 | |HGNC=8792 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP56 | |UniProt=Q9NP56 | ||
|association_with_transcript=-17bp_to_ENST00000308191,NM_018945,uc003qgp.2_5end | |association_with_transcript=-17bp_to_ENST00000308191,NM_018945,uc003qgp.2_5end | ||
|cluster_id=chr6:136172786..136172816,+ | |||
|coexpression_cluster_id=C2843 | |||
|description=CAGE_peak_4_at_PDE7B_5end | |description=CAGE_peak_4_at_PDE7B_5end | ||
|id=chr6:136172786..136172816,+ | |id=chr6:136172786..136172816,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.60e-08!42;CL:0000860!1.61e-07!45 | |ontology_enrichment_celltype=CL:0002057!8.60e-08!42;CL:0000860!1.61e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.44e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.53e-09,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-12!115;UBERON:0002204!1.90e-11!167;UBERON:0002780!6.63e-11!41;UBERON:0001890!6.63e-11!41;UBERON:0006240!6.63e-11!41;UBERON:0003080!2.90e-10!42;UBERON:0002616!4.20e-10!59;UBERON:0001049!6.27e-10!57;UBERON:0005068!6.27e-10!57;UBERON:0006241!6.27e-10!57;UBERON:0007135!6.27e-10!57;UBERON:0001869!2.22e-09!32;UBERON:0002020!2.46e-09!34;UBERON:0003528!2.46e-09!34;UBERON:0001893!2.91e-09!34;UBERON:0003056!3.58e-09!61;UBERON:0002346!4.72e-09!90;UBERON:0002791!7.63e-09!33;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0001950!8.88e-08!20;UBERON:0000955!2.16e-07!69;UBERON:0006238!2.16e-07!69;UBERON:0000914!5.70e-07!83;UBERON:0002329!5.70e-07!83;UBERON:0003077!5.70e-07!83;UBERON:0003059!5.70e-07!83;UBERON:0007282!5.70e-07!83;UBERON:0009618!5.70e-07!83;UBERON:0007285!5.70e-07!83;UBERON:0002619!7.94e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!1.52e-12!115;UBERON:0002204!1.90e-11!167;UBERON:0002780!6.63e-11!41;UBERON:0001890!6.63e-11!41;UBERON:0006240!6.63e-11!41;UBERON:0003080!2.90e-10!42;UBERON:0002616!4.20e-10!59;UBERON:0001049!6.27e-10!57;UBERON:0005068!6.27e-10!57;UBERON:0006241!6.27e-10!57;UBERON:0007135!6.27e-10!57;UBERON:0001869!2.22e-09!32;UBERON:0002020!2.46e-09!34;UBERON:0003528!2.46e-09!34;UBERON:0001893!2.91e-09!34;UBERON:0003056!3.58e-09!61;UBERON:0002346!4.72e-09!90;UBERON:0002791!7.63e-09!33;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0001950!8.88e-08!20;UBERON:0000955!2.16e-07!69;UBERON:0006238!2.16e-07!69;UBERON:0000914!5.70e-07!83;UBERON:0002329!5.70e-07!83;UBERON:0003077!5.70e-07!83;UBERON:0003059!5.70e-07!83;UBERON:0007282!5.70e-07!83;UBERON:0009618!5.70e-07!83;UBERON:0007285!5.70e-07!83;UBERON:0002619!7.94e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.21e-07;32!UBERON:0002791;5.15e-07;32!UBERON:0001893;6.11e-07;34!UBERON:0003528;9.10e-07;34!UBERON:0002020;9.10e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.27e-08,41;UBERON:0001890,4.27e-08,41;UBERON:0003080,4.27e-08,41;UBERON:0006240,4.27e-08,41;UBERON:0001869,6.82e-08,32;UBERON:0001893,4.17e-07,34;UBERON:0001049,4.23e-07,56;UBERON:0005068,4.23e-07,56;UBERON:0006241,4.23e-07,56;UBERON:0007135,4.23e-07,56;UBERON:0003056,4.96e-07,61;UBERON:0002791,5.95e-07,32;UBERON:0003528,6.68e-07,34;UBERON:0002020,6.68e-07,34;UBERON:0002346,7.28e-07,86;UBERON:0010314,7.33e-07,132 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,1.98026164736075,3.64537113300707,0.672325146451775,0.602694528023977,1.46062018077475,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,1.57345710739562,1.15148819429164,2.01260960310899,0,0,0,0.154934401160603,0,0.587200878669695,0.553995408531877,1.20326668482085,1.51907609501096,0,0,0.257575567634187,0.436194716338694,0,0.970336244751265,0.929716147622738,0.411167888021826,0.929119112685311,0.575384784644301,0,1.6553756092201,1.03423704220986,1.29096936716765,1.35426486594342,0.941211697713023,1.09162460023138,1.34834090667051,0.918251677112708,1.28371610830437,0,0.329851300186716,0.997318288108159,1.70489900213078,1.16083695451434,0.56738522469114,0,1.25624332628372,0,1.73751075764093,0.605399502633369,1.10483290796269,1.89877432464531,1.69004229049553,1.70083439972035,3.35453832813401,1.57260083605093,2.70318407114711,1.12507910687956,3.13514018115373,2.38700012638908,5.11459630540975,5.27988733383968,3.82297027883492,8.89509253863555,5.54749289336459,6.4063357925762,7.47178171940828,7.27149360063348,7.63243003628291,5.69212969109448,1.76171156811282,2.6759125968766,0,0.560508562981536,1.84368859342554,0.590129310341499,0.393010762749165,0.616804496998528,0.334372990781356,0.977766799900771,0.946895611469467,1.94826728407911,11.5866875160581,0.294605907474837,0,0,1.79327847615945,3.64166173167659,17.4304178879897,15.4756009960075,21.1556252586588,4.74517002118593,7.22360235842225,2.09071047609954,5.21222976408804,0.383220493601921,1.71813722741315,2.27717722817553,0.637130828648193,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.473554504088034,0.821127996921047,0.201606743224732,0,0,0,0.670700859703636,0.12786256184353,1.44575660953827,2.00535164254356,1.01392563272577,0,0.486634870302636,1.41802225746102,0.886917589850256,2.28370442802128,1.0478326039817,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0.516833518338658,0,1.00416183829401,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.49333509683432,2.8008993185979,0.808264032418128,1.14423332179421,3.63257826347835,0.576175924479999,0.70296429550139,0,0.570471821544449,0,1.52664848236894,0.323745888736263,0.421352420106746,1.22492502752936,0.61417158655884,1.23990937410919,3.56400857184616,3.4617370098998,0,0,0.336672227908132,1.00094815897571,0.831192346452549,2.63386572528503,0.612975591598039,4.6573798261045,0,0.89694817844431,1.49490172172997,1.48352330811693,1.80054657650641,0.824420233907511,1.03056216018252,0.37223371266318,0.843881661206331,0.292311015483596,0.757301322732344,1.56484827691909,1.2931684545505,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,1.39310378409594,1.44375896333917,0.591534000199219,0.842923450390509,0.241011029883482,0.661763836394364,0.435758888184812,0.237270619111097,0.674156540800822,1.17732879075208,0,0,0,0,0,1.26755034821831,0,0,0,0,0.686271241194102,0,0,0,0,0,1.03993478527958,0,0.579652024875384,0.821860859650752,0.144366447761074,0,0,0.790204397959275,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0,0,0,1.47798971368783,0.616339038092582,3.31724984865235,2.59415916150531,4.29224273649692,0,0,0,0,0.102827492703324,0,0.285826432630578,0.560655421726804,0,0.80672114403045,1.16344544182,3.57656445851882,0.845302752556,0,1.04007436911366,2.05765899409714,0,1.0656887160644,0.857867961948885,8.13932408087165,0.823240336780769,0.65147236858747,0.710783897485092,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,4.27910715122155,0.289562613335158,0,0.537182889719687,0.112085143993527,0,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,3.18997878469764,1.50051156317903,1.35632511849868,0.623912584592421,0.178428988797162,0.473107245101804,0.585707074963566,3.91229929646035,0,1.03473071292505,2.65690239414175,0.737476674166813,0,0.195801157462741,0.343143423810856,1.03384013061444,0.862856803274467,0.533637789017222,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0.355123450626254,0.657017248110473,0.519254429183621,0.232420756919918,0,0,0,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,1.45006077438183,0.616194468458578,1.68854042198743,0.827019434907183,4.18938954986267,2.75531718437034,0.596586391912706,0.712256285173899,0,0,0,0,0.464845549297286,1.88887408098384,3.485186350803,0.308033580176089,0,5.21959795245044,0.9266210955196,0.143124886741991,1.116475108079,1.89827654831236,0.571890581771475,1.27948895655667,0.42793898803392,4.45484547096312,0,0.719489830333259,0.823611089208164,0.706874414074119,0.202182481573316,0,0.421258456238981,0,1.70599442741899,2.11300293513511,0.545999645631943,0.989838023675989,0,4.96228809191512,0.6634389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| ||
|short_description=p4@PDE7B | |short_description=p4@PDE7B | ||
}} | }} |
Latest revision as of 23:38, 24 September 2015
Short description: | p4@PDE7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDE7B_5end |
Coexpression cluster: | C2843_CD4_cholangiocellular_seminal_ductus_Mesenchymal_caudate_Fibroblast |
Association with transcript: | -17bp_to_ENST00000308191, NM_018945, uc003qgp.2_5end |
EntrezGene: | PDE7B |
HGNC: | 8792 |
UniProt: | Q9NP56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.53e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 4.27e-08 | 41 |
forebrain | 4.27e-08 | 41 |
anterior neural tube | 4.27e-08 | 41 |
future forebrain | 4.27e-08 | 41 |
cerebral hemisphere | 6.82e-08 | 32 |
telencephalon | 4.17e-07 | 34 |
neural tube | 4.23e-07 | 56 |
neural rod | 4.23e-07 | 56 |
future spinal cord | 4.23e-07 | 56 |
neural keel | 4.23e-07 | 56 |
pre-chordal neural plate | 4.96e-07 | 61 |
regional part of telencephalon | 5.95e-07 | 32 |
brain grey matter | 6.68e-07 | 34 |
gray matter | 6.68e-07 | 34 |
neurectoderm | 7.28e-07 | 86 |
structure with developmental contribution from neural crest | 7.33e-07 | 132 |