FFCP PHASE1:Hg19::chr9:12693559..12693562,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=Q6LES1 | |UniProt=Q6LES1 | ||
|association_with_transcript=-434bp_to_CR407683_5end | |association_with_transcript=-434bp_to_CR407683_5end | ||
|cluster_id=chr9:12693559..12693562,+ | |||
|coexpression_cluster_id=C348 | |||
|description=CAGE_peak_22_at_TYRP1_5end | |description=CAGE_peak_22_at_TYRP1_5end | ||
|id=chr9:12693559..12693562,+ | |id=chr9:12693559..12693562,+ | ||
|ontology_enrichment_celltype=CL:0000148!5.39e-88!10;CL:0000541!5.39e-88!10;CL:0000147!1.07e-81!14;CL:0002567!1.04e-54!3;CL:0000710!5.21e-44!20;CL:0000075!2.82e-42!27;CL:0000325!8.00e-37!39;CL:0002077!1.24e-26!33;CL:0000333!2.14e-20!41;CL:0002566!8.95e-20!1;CL:0000149!5.15e-19!4;CL:0000133!2.65e-14!59;CL:0000221!6.68e-12!71;CL:0002586!3.16e-07!3 | |ontology_enrichment_celltype=CL:0000148!5.39e-88!10;CL:0000541!5.39e-88!10;CL:0000147!1.07e-81!14;CL:0002567!1.04e-54!3;CL:0000710!5.21e-44!20;CL:0000075!2.82e-42!27;CL:0000325!8.00e-37!39;CL:0002077!1.24e-26!33;CL:0000333!2.14e-20!41;CL:0002566!8.95e-20!1;CL:0000149!5.15e-19!4;CL:0000133!2.65e-14!59;CL:0000221!6.68e-12!71;CL:0002586!3.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.89e-120;10!CL:0000147;5.87e-86;14!CL:0002567;3.54e-74;3!CL:0000710;2.67e-60;20!CL:0000075;9.24e-45;27!CL:0002077;2.45e-31;34!CL:0002566;2.16e-26;1!CL:0000149;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.24e-120,10;CL:0000541,4.24e-120,10;CL:0000147,6.25e-86,14;CL:0002567,3.54e-74,3;CL:0000710,2.79e-60,20;CL:0000075,9.55e-45,27;CL:0002077,1.35e-35,34;CL:0000333,3.38e-28,41;CL:0002566,2.16e-26,1;CL:0000133,6.28e-20,59;CL:0000221,1.90e-16,72;CL:0000149,1.40e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;8.91e-11;59!CL:0000221;4.86e-09;72 | |||
|ontology_enrichment_disease=DOID:1909!2.49e-10!2 | |ontology_enrichment_disease=DOID:1909!2.49e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.46e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.37e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!3.35e-15!5;UBERON:0005388!3.35e-15!5;UBERON:0001802!3.35e-15!5;UBERON:0000019!4.79e-09!19;UBERON:0000047!4.79e-09!19;UBERON:0004088!4.79e-09!19;UBERON:0003072!4.79e-09!19;UBERON:0003071!4.79e-09!19;UBERON:0004128!4.79e-09!19;UBERON:0000970!1.27e-08!20;UBERON:0002104!3.07e-08!21;UBERON:0001456!3.07e-08!21;UBERON:0000020!1.43e-07!23;UBERON:0007625!2.16e-07!11;UBERON:0001032!2.80e-07!24;UBERON:0004456!2.80e-07!24;UBERON:0001781!3.16e-07!3;UBERON:0001782!3.16e-07!3;UBERON:0005424!3.16e-07!3 | |ontology_enrichment_uberon=UBERON:0000966!3.35e-15!5;UBERON:0005388!3.35e-15!5;UBERON:0001802!3.35e-15!5;UBERON:0000019!4.79e-09!19;UBERON:0000047!4.79e-09!19;UBERON:0004088!4.79e-09!19;UBERON:0003072!4.79e-09!19;UBERON:0003071!4.79e-09!19;UBERON:0004128!4.79e-09!19;UBERON:0000970!1.27e-08!20;UBERON:0002104!3.07e-08!21;UBERON:0001456!3.07e-08!21;UBERON:0000020!1.43e-07!23;UBERON:0007625!2.16e-07!11;UBERON:0001032!2.80e-07!24;UBERON:0004456!2.80e-07!24;UBERON:0001781!3.16e-07!3;UBERON:0001782!3.16e-07!3;UBERON:0005424!3.16e-07!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p22@TYRP1 | |short_description=p22@TYRP1 | ||
}} | }} |
Latest revision as of 23:31, 24 September 2015
Short description: | p22@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_TYRP1_5end |
Coexpression cluster: | C348_Melanocyte_melanoma_retina_cervical_eye_carcinoid_Basophils |
Association with transcript: | -434bp_to_CR407683_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | Q6LES1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.24e-120 | 10 |
melanoblast | 4.24e-120 | 10 |
pigment cell | 6.25e-86 | 14 |
light melanocyte | 3.54e-74 | 3 |
neurecto-epithelial cell | 2.79e-60 | 20 |
columnar/cuboidal epithelial cell | 9.55e-45 | 27 |
ecto-epithelial cell | 1.35e-35 | 34 |
migratory neural crest cell | 3.38e-28 | 41 |
dark melanocyte | 2.16e-26 | 1 |
neurectodermal cell | 6.28e-20 | 59 |
ectodermal cell | 1.90e-16 | 72 |
visual pigment cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.37e-13 | 2 |