FFCP PHASE1:Hg19::chr14:62162224..62162254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3091 | |EntrezGene=3091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4910 | |HGNC=4910 | ||
|TSSclassifier=strong | |||
|UniProt=F8W9L0,B4E2U7 | |UniProt=F8W9L0,B4E2U7 | ||
|association_with_transcript=0bp_to_ENST00000394988,ENST00000539494,ENST00000553999,ENST00000557446_5end | |association_with_transcript=0bp_to_ENST00000394988,ENST00000539494,ENST00000553999,ENST00000557446_5end | ||
|cluster_id=chr14:62162224..62162254,+ | |||
|coexpression_cluster_id=C3441 | |||
|description=CAGE_peak_1_at_HIF1A_5end | |description=CAGE_peak_1_at_HIF1A_5end | ||
|id=chr14:62162224..62162254,+ | |id=chr14:62162224..62162254,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.53e-23!682;CL:0000548!3.97e-23!679;CL:0000004!3.97e-23!679;CL:0000255!3.97e-23!679;CL:0000048!6.16e-22!430;CL:0002371!1.98e-21!591;CL:0000723!8.24e-21!436;CL:0000144!1.46e-20!625;CL:0000034!2.33e-20!444;CL:0002057!7.78e-19!42;CL:0000860!5.50e-18!45;CL:0000003!9.05e-18!722;CL:0000766!3.26e-17!76;CL:0002320!2.90e-14!365;CL:0000055!9.05e-14!180;CL:0002194!1.34e-13!63;CL:0000576!1.34e-13!63;CL:0000040!1.34e-13!63;CL:0000559!1.34e-13!63;CL:0000134!1.68e-13!358;CL:0000557!1.83e-13!71;CL:0002009!2.76e-13!65;CL:0000839!3.13e-12!70;CL:0000057!8.91e-12!75;CL:0000063!4.04e-11!578;CL:0000219!2.56e-10!390;CL:0000680!3.33e-08!57;CL:0000056!3.33e-08!57;CL:0000355!3.33e-08!57;CL:0000187!3.59e-07!54;CL:0002620!9.25e-07!23 | |ontology_enrichment_celltype=CL:0000012!1.53e-23!682;CL:0000548!3.97e-23!679;CL:0000004!3.97e-23!679;CL:0000255!3.97e-23!679;CL:0000048!6.16e-22!430;CL:0002371!1.98e-21!591;CL:0000723!8.24e-21!436;CL:0000144!1.46e-20!625;CL:0000034!2.33e-20!444;CL:0002057!7.78e-19!42;CL:0000860!5.50e-18!45;CL:0000003!9.05e-18!722;CL:0000766!3.26e-17!76;CL:0002320!2.90e-14!365;CL:0000055!9.05e-14!180;CL:0002194!1.34e-13!63;CL:0000576!1.34e-13!63;CL:0000040!1.34e-13!63;CL:0000559!1.34e-13!63;CL:0000134!1.68e-13!358;CL:0000557!1.83e-13!71;CL:0002009!2.76e-13!65;CL:0000839!3.13e-12!70;CL:0000057!8.91e-12!75;CL:0000063!4.04e-11!578;CL:0000219!2.56e-10!390;CL:0000680!3.33e-08!57;CL:0000056!3.33e-08!57;CL:0000355!3.33e-08!57;CL:0000187!3.59e-07!54;CL:0002620!9.25e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.01e-17;33!CL:0002057;4.01e-17;33!CL:0000473;4.33e-14;39!CL:0000234;4.33e-14;39!CL:0000576;5.22e-10;48!CL:0000766;5.62e-09;69!CL:0002620;9.40e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.94e-22,427;CL:0000723,2.70e-21,433;CL:0000034,7.82e-21,441;CL:0000860,7.78e-19,42;CL:0002057,7.78e-19,42;CL:0000473,1.33e-18,48;CL:0000234,1.33e-18,48;CL:0000766,1.87e-17,72;CL:0002320,1.69e-14,361;CL:0002194,8.01e-14,59;CL:0000576,8.01e-14,59;CL:0000040,8.01e-14,59;CL:0000559,8.01e-14,59;CL:0000134,9.88e-14,354;CL:0000557,1.27e-13,67;CL:0002009,1.76e-13,61;CL:0000839,2.36e-12,66;CL:0000057,6.34e-12,76;CL:0000219,1.70e-10,386;CL:0000680,2.15e-08,58;CL:0000056,2.15e-08,58;CL:0000355,2.15e-08,58;CL:0000187,2.34e-07,55;CL:0002620,9.25e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;5.05e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.37e-19!167;UBERON:0002384!9.35e-15!375;UBERON:0002371!1.73e-13!80;UBERON:0004765!3.30e-13!101;UBERON:0001434!3.30e-13!101;UBERON:0000926!3.73e-13!448;UBERON:0004120!3.73e-13!448;UBERON:0006603!3.73e-13!448;UBERON:0001474!2.97e-12!86;UBERON:0003081!5.93e-11!216;UBERON:0002390!1.42e-10!102;UBERON:0003061!1.42e-10!102;UBERON:0002193!5.44e-10!112;UBERON:0002405!7.92e-10!115;UBERON:0000914!6.07e-08!83;UBERON:0002329!6.07e-08!83;UBERON:0003077!6.07e-08!83;UBERON:0003059!6.07e-08!83;UBERON:0007282!6.07e-08!83;UBERON:0009618!6.07e-08!83;UBERON:0007285!6.07e-08!83;UBERON:0000468!4.02e-07!659;UBERON:0000467!8.09e-07!625 | |ontology_enrichment_uberon=UBERON:0002204!5.37e-19!167;UBERON:0002384!9.35e-15!375;UBERON:0002371!1.73e-13!80;UBERON:0004765!3.30e-13!101;UBERON:0001434!3.30e-13!101;UBERON:0000926!3.73e-13!448;UBERON:0004120!3.73e-13!448;UBERON:0006603!3.73e-13!448;UBERON:0001474!2.97e-12!86;UBERON:0003081!5.93e-11!216;UBERON:0002390!1.42e-10!102;UBERON:0003061!1.42e-10!102;UBERON:0002193!5.44e-10!112;UBERON:0002405!7.92e-10!115;UBERON:0000914!6.07e-08!83;UBERON:0002329!6.07e-08!83;UBERON:0003077!6.07e-08!83;UBERON:0003059!6.07e-08!83;UBERON:0007282!6.07e-08!83;UBERON:0009618!6.07e-08!83;UBERON:0007285!6.07e-08!83;UBERON:0000468!4.02e-07!659;UBERON:0000467!8.09e-07!625 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.34e-20,167;UBERON:0000926,1.02e-16,315;UBERON:0004120,1.02e-16,315;UBERON:0006603,1.02e-16,315;UBERON:0002384,5.47e-15,371;UBERON:0004765,3.66e-14,90;UBERON:0001434,4.14e-14,100;UBERON:0002371,1.36e-13,76;UBERON:0001474,2.68e-12,82;UBERON:0002405,6.30e-11,93;UBERON:0003081,6.51e-11,203;UBERON:0002390,1.54e-10,98;UBERON:0003061,1.54e-10,98;UBERON:0002193,6.24e-10,108;UBERON:0002329,6.79e-07,71;UBERON:0003059,6.79e-07,71;UBERON:0007282,6.79e-07,71;UBERON:0004290,6.79e-07,71;UBERON:0009618,6.79e-07,71 | |||
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064794 | ||
|short_description=p1@HIF1A | |short_description=p1@HIF1A | ||
}} | }} |
Latest revision as of 23:18, 24 September 2015
Short description: | p1@HIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIF1A_5end |
Coexpression cluster: | C3441_Eosinophils_Mast_Neutrophils_Preadipocyte_CD14_Fibroblast_Smooth |
Association with transcript: | 0bp_to_ENST00000394988, ENST00000539494, ENST00000553999, ENST00000557446_5end |
EntrezGene: | HIF1A |
HGNC: | 4910 |
UniProt: | F8W9L0B4E2U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.94e-22 | 427 |
somatic stem cell | 2.70e-21 | 433 |
stem cell | 7.82e-21 | 441 |
classical monocyte | 7.78e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.78e-19 | 42 |
defensive cell | 1.33e-18 | 48 |
phagocyte | 1.33e-18 | 48 |
myeloid leukocyte | 1.87e-17 | 72 |
connective tissue cell | 1.69e-14 | 361 |
monopoietic cell | 8.01e-14 | 59 |
monocyte | 8.01e-14 | 59 |
monoblast | 8.01e-14 | 59 |
promonocyte | 8.01e-14 | 59 |
mesenchymal cell | 9.88e-14 | 354 |
granulocyte monocyte progenitor cell | 1.27e-13 | 67 |
macrophage dendritic cell progenitor | 1.76e-13 | 61 |
myeloid lineage restricted progenitor cell | 2.36e-12 | 66 |
fibroblast | 6.34e-12 | 76 |
motile cell | 1.70e-10 | 386 |
muscle precursor cell | 2.15e-08 | 58 |
myoblast | 2.15e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.15e-08 | 58 |
muscle cell | 2.34e-07 | 55 |
skin fibroblast | 9.25e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.34e-20 | 167 |
mesoderm | 1.02e-16 | 315 |
mesoderm-derived structure | 1.02e-16 | 315 |
presumptive mesoderm | 1.02e-16 | 315 |
connective tissue | 5.47e-15 | 371 |
skeletal element | 3.66e-14 | 90 |
skeletal system | 4.14e-14 | 100 |
bone marrow | 1.36e-13 | 76 |
bone element | 2.68e-12 | 82 |
immune system | 6.30e-11 | 93 |
lateral plate mesoderm | 6.51e-11 | 203 |
hematopoietic system | 1.54e-10 | 98 |
blood island | 1.54e-10 | 98 |
hemolymphoid system | 6.24e-10 | 108 |
somite | 6.79e-07 | 71 |
presomitic mesoderm | 6.79e-07 | 71 |
presumptive segmental plate | 6.79e-07 | 71 |
dermomyotome | 6.79e-07 | 71 |
trunk paraxial mesoderm | 6.79e-07 | 71 |