FFCP PHASE1:Hg19::chr16:1832527..1832582,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90864 | |EntrezGene=90864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30629 | |HGNC=30629 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PJ21 | |UniProt=Q6PJ21 | ||
|association_with_transcript=0bp_to_ENST00000301717,NM_080861,uc002cmu.2,uc002cmv.2,uc010uvm.1_5end | |association_with_transcript=0bp_to_ENST00000301717,NM_080861,uc002cmu.2,uc002cmv.2,uc010uvm.1_5end | ||
|cluster_id=chr16:1832527..1832582,- | |||
|description=CAGE_peak_1_at_SPSB3_5end | |description=CAGE_peak_1_at_SPSB3_5end | ||
|id=chr16:1832527..1832582,- | |id=chr16:1832527..1832582,- | ||
|ontology_enrichment_celltype=CL:0000738!5.42e-15!140;CL:0002031!2.27e-11!124;CL:0002087!8.58e-11!119;CL:0002057!3.09e-10!42;CL:0000988!4.95e-10!182;CL:0000791!5.37e-10!18;CL:0000789!5.37e-10!18;CL:0002420!5.37e-10!18;CL:0002419!5.37e-10!18;CL:0000790!5.37e-10!18;CL:0000037!8.42e-10!172;CL:0000566!8.42e-10!172;CL:0000766!3.03e-09!76;CL:0000860!7.13e-09!45;CL:0002032!2.81e-08!165;CL:0000837!2.81e-08!165;CL:0000625!9.62e-08!11;CL:0000557!4.56e-07!71;CL:0000839!5.27e-07!70 | |ontology_enrichment_celltype=CL:0000738!5.42e-15!140;CL:0002031!2.27e-11!124;CL:0002087!8.58e-11!119;CL:0002057!3.09e-10!42;CL:0000988!4.95e-10!182;CL:0000791!5.37e-10!18;CL:0000789!5.37e-10!18;CL:0002420!5.37e-10!18;CL:0002419!5.37e-10!18;CL:0000790!5.37e-10!18;CL:0000037!8.42e-10!172;CL:0000566!8.42e-10!172;CL:0000766!3.03e-09!76;CL:0000860!7.13e-09!45;CL:0002032!2.81e-08!165;CL:0000837!2.81e-08!165;CL:0000625!9.62e-08!11;CL:0000557!4.56e-07!71;CL:0000839!5.27e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.30e-10;18!CL:0000789;4.30e-10;18!CL:0002419;4.30e-10;18!CL:0000625;9.70e-08;11 | |ontology_enrichment_celltype_v019=CL:0000791;4.30e-10;18!CL:0000789;4.30e-10;18!CL:0002419;4.30e-10;18!CL:0000625;9.70e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.18e-15,136;CL:0002031,5.96e-12,120;CL:0002087,2.28e-11,115;CL:0000988,2.19e-10,177;CL:0000860,3.09e-10,42;CL:0002057,3.09e-10,42;CL:0000037,3.38e-10,168;CL:0000791,5.37e-10,18;CL:0000789,5.37e-10,18;CL:0002420,5.37e-10,18;CL:0002419,5.37e-10,18;CL:0000790,5.37e-10,18;CL:0000766,5.66e-10,72;CL:0000473,6.91e-09,48;CL:0000234,6.91e-09,48;CL:0002032,1.23e-08,161;CL:0000837,1.23e-08,161;CL:0000625,9.62e-08,11;CL:0000557,1.13e-07,67;CL:0000839,1.31e-07,66;CL:0002009,7.65e-07,61;CL:0002194,7.95e-07,59;CL:0000576,7.95e-07,59;CL:0000040,7.95e-07,59;CL:0000559,7.95e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;4.30e-10;18!CL:0002057;1.04e-07;42 | |ontology_enrichment_development_v019=CL:0000790;4.30e-10;18!CL:0002057;1.04e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.16e-10!102;UBERON:0003061!2.16e-10!102;UBERON:0002193!3.83e-10!112;UBERON:0007023!1.01e-08!115;UBERON:0003081!1.84e-07!216;UBERON:0002371!6.32e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!2.16e-10!102;UBERON:0003061!2.16e-10!102;UBERON:0002193!3.83e-10!112;UBERON:0007023!1.01e-08!115;UBERON:0003081!1.84e-07!216;UBERON:0002371!6.32e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.04e-11,98;UBERON:0003061,5.04e-11,98;UBERON:0002193,1.02e-10,108;UBERON:0007023,9.33e-09,114;UBERON:0002405,1.55e-07,93;UBERON:0002371,1.83e-07,76;UBERON:0003081,7.25e-07,203 | |||
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| ||
|short_description=p1@SPSB3 | |short_description=p1@SPSB3 | ||
}} | }} |
Latest revision as of 23:06, 24 September 2015
Short description: | p1@SPSB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPSB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301717, NM_080861, uc002cmu.2, uc002cmv.2, uc010uvm.1_5end |
EntrezGene: | SPSB3 |
HGNC: | 30629 |
UniProt: | Q6PJ21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.18e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 5.96e-12 | 120 |
nongranular leukocyte | 2.28e-11 | 115 |
hematopoietic cell | 2.19e-10 | 177 |
classical monocyte | 3.09e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.09e-10 | 42 |
hematopoietic stem cell | 3.38e-10 | 168 |
mature alpha-beta T cell | 5.37e-10 | 18 |
alpha-beta T cell | 5.37e-10 | 18 |
immature T cell | 5.37e-10 | 18 |
mature T cell | 5.37e-10 | 18 |
immature alpha-beta T cell | 5.37e-10 | 18 |
myeloid leukocyte | 5.66e-10 | 72 |
defensive cell | 6.91e-09 | 48 |
phagocyte | 6.91e-09 | 48 |
hematopoietic oligopotent progenitor cell | 1.23e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-08 | 161 |
CD8-positive, alpha-beta T cell | 9.62e-08 | 11 |
granulocyte monocyte progenitor cell | 1.13e-07 | 67 |
myeloid lineage restricted progenitor cell | 1.31e-07 | 66 |
macrophage dendritic cell progenitor | 7.65e-07 | 61 |
monopoietic cell | 7.95e-07 | 59 |
monocyte | 7.95e-07 | 59 |
monoblast | 7.95e-07 | 59 |
promonocyte | 7.95e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.04e-11 | 98 |
blood island | 5.04e-11 | 98 |
hemolymphoid system | 1.02e-10 | 108 |
adult organism | 9.33e-09 | 114 |
immune system | 1.55e-07 | 93 |
bone marrow | 1.83e-07 | 76 |
lateral plate mesoderm | 7.25e-07 | 203 |