FFCP PHASE1:Hg19::chr19:7985880..7985929,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:7985880..7985929,+ to FFCP PHASE1:Hg19::chr19:7985880..7985929,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6618 | |EntrezGene=6618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11135 | |HGNC=11135 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002mix.1_5end | |||
|cluster_id=chr19:7985880..7985929,+ | |||
|description=CAGE_peak_2_at_SNAPC2_5end | |||
|id=chr19:7985880..7985929,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.16e-28!591;CL:0000144!5.84e-24!625;CL:0000048!4.34e-18!430;CL:0000222!4.38e-18!119;CL:0000723!1.64e-17!436;CL:0000055!6.34e-17!180;CL:0000548!9.51e-17!679;CL:0000004!9.51e-17!679;CL:0000255!9.51e-17!679;CL:0000012!8.10e-16!682;CL:0000034!4.48e-15!444;CL:0000680!6.74e-13!57;CL:0000056!6.74e-13!57;CL:0000355!6.74e-13!57;CL:0000183!8.49e-13!59;CL:0000187!3.68e-12!54;CL:0000192!3.92e-12!42;CL:0000514!3.92e-12!42;CL:0000359!6.60e-11!32;CL:0000003!8.70e-11!722;CL:0002320!2.43e-10!365;CL:0000557!1.34e-09!71;CL:0000134!1.70e-09!358;CL:0000839!4.05e-09!70;CL:0000393!1.59e-08!60;CL:0000211!1.59e-08!60;CL:0000219!1.62e-08!390;CL:0000220!1.95e-08!246;CL:0000057!2.82e-08!75;CL:0002057!3.03e-08!42;CL:0002194!5.89e-08!63;CL:0000576!5.89e-08!63;CL:0000040!5.89e-08!63;CL:0000559!5.89e-08!63;CL:0002009!5.97e-08!65;CL:0000766!6.56e-08!76;CL:0002321!7.42e-08!248;CL:0000063!1.49e-07!578;CL:0000213!8.74e-07!57;CL:0000215!8.74e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.26e-10;32!CL:0000192;6.51e-09;43!CL:0000860;8.16e-08;33!CL:0002057;8.16e-08;33!CL:0000473;1.63e-07;39!CL:0000234;1.63e-07;39!CL:0000187;6.55e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.86e-19,427;CL:0000723,9.38e-19,433;CL:0000222,2.13e-18,121;CL:0000034,3.17e-16,441;CL:0000680,5.39e-13,58;CL:0000056,5.39e-13,58;CL:0000355,5.39e-13,58;CL:0000187,2.97e-12,55;CL:0000192,4.24e-12,43;CL:0000514,4.24e-12,43;CL:0002320,3.67e-11,361;CL:0000557,5.75e-11,67;CL:0000359,6.01e-11,32;CL:0000839,1.93e-10,66;CL:0000134,2.80e-10,354;CL:0000219,2.24e-09,386;CL:0000473,2.38e-09,48;CL:0000234,2.38e-09,48;CL:0002194,3.05e-09,59;CL:0000576,3.05e-09,59;CL:0000040,3.05e-09,59;CL:0000559,3.05e-09,59;CL:0002009,3.30e-09,61;CL:0000766,3.60e-09,72;CL:0000393,1.33e-08,61;CL:0000211,1.33e-08,61;CL:0000057,1.70e-08,76;CL:0002321,1.97e-08,250;CL:0000860,2.83e-08,42;CL:0002057,2.83e-08,42;CL:0000213,6.10e-07,58;CL:0000215,6.10e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;6.51e-09;43!CL:0000355;4.09e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.31e-20!167;UBERON:0003081!1.61e-17!216;UBERON:0001637!1.59e-16!42;UBERON:0003509!1.59e-16!42;UBERON:0004572!1.59e-16!42;UBERON:0001981!8.80e-15!60;UBERON:0007500!8.80e-15!60;UBERON:0004537!8.80e-15!60;UBERON:0006965!8.80e-15!60;UBERON:0000055!1.70e-13!69;UBERON:0004872!1.76e-13!84;UBERON:0000926!2.58e-13!448;UBERON:0004120!2.58e-13!448;UBERON:0006603!2.58e-13!448;UBERON:0002049!1.43e-12!79;UBERON:0007798!1.43e-12!79;UBERON:0004573!3.64e-12!33;UBERON:0004571!3.64e-12!33;UBERON:0000486!1.46e-11!82;UBERON:0002371!1.40e-10!80;UBERON:0001134!1.78e-10!61;UBERON:0002036!1.78e-10!61;UBERON:0003082!1.78e-10!61;UBERON:0002385!2.24e-10!63;UBERON:0001015!2.24e-10!63;UBERON:0000383!2.24e-10!63;UBERON:0002384!4.61e-10!375;UBERON:0004290!1.71e-09!70;UBERON:0004765!1.97e-09!101;UBERON:0001434!1.97e-09!101;UBERON:0004535!1.97e-09!110;UBERON:0001474!2.93e-09!86;UBERON:0000914!5.59e-09!83;UBERON:0002329!5.59e-09!83;UBERON:0003077!5.59e-09!83;UBERON:0003059!5.59e-09!83;UBERON:0007282!5.59e-09!83;UBERON:0009618!5.59e-09!83;UBERON:0007285!5.59e-09!83;UBERON:0001009!1.31e-08!113;UBERON:0003914!4.55e-08!118;UBERON:0000947!7.68e-07!21;UBERON:0010191!7.68e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.94e-12;42!UBERON:0003509;3.94e-12;42!UBERON:0004572;3.94e-12;42!UBERON:0004573;5.60e-11;33!UBERON:0004571;5.60e-11;33!UBERON:0007500;5.58e-09;56!UBERON:0001981;5.58e-09;56!UBERON:0004537;5.58e-09;56!UBERON:0000947;7.26e-07;21!UBERON:0010191;7.26e-07;21!UBERON:0000055;9.52e-07;65!UBERON:0003914;9.74e-07;74 | |||
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| ||
|short_description=p2@SNAPC2 | |||
}} | }} |
Latest revision as of 22:50, 24 September 2015
Short description: | p2@SNAPC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNAPC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002mix.1_5end |
EntrezGene: | SNAPC2 |
HGNC: | 11135 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.86e-19 | 427 |
somatic stem cell | 9.38e-19 | 433 |
mesodermal cell | 2.13e-18 | 121 |
stem cell | 3.17e-16 | 441 |
muscle precursor cell | 5.39e-13 | 58 |
myoblast | 5.39e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.39e-13 | 58 |
muscle cell | 2.97e-12 | 55 |
smooth muscle cell | 4.24e-12 | 43 |
smooth muscle myoblast | 4.24e-12 | 43 |
connective tissue cell | 3.67e-11 | 361 |
granulocyte monocyte progenitor cell | 5.75e-11 | 67 |
vascular associated smooth muscle cell | 6.01e-11 | 32 |
myeloid lineage restricted progenitor cell | 1.93e-10 | 66 |
mesenchymal cell | 2.80e-10 | 354 |
motile cell | 2.24e-09 | 386 |
defensive cell | 2.38e-09 | 48 |
phagocyte | 2.38e-09 | 48 |
monopoietic cell | 3.05e-09 | 59 |
monocyte | 3.05e-09 | 59 |
monoblast | 3.05e-09 | 59 |
promonocyte | 3.05e-09 | 59 |
macrophage dendritic cell progenitor | 3.30e-09 | 61 |
myeloid leukocyte | 3.60e-09 | 72 |
electrically responsive cell | 1.33e-08 | 61 |
electrically active cell | 1.33e-08 | 61 |
fibroblast | 1.70e-08 | 76 |
embryonic cell | 1.97e-08 | 250 |
classical monocyte | 2.83e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-08 | 42 |
lining cell | 6.10e-07 | 58 |
barrier cell | 6.10e-07 | 58 |