FFCP PHASE1:Hg19::chr1:211500190..211500204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7188 | |EntrezGene=7188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12035 | |HGNC=12035 | ||
|TSSclassifier=strong | |||
|UniProt=O00463 | |UniProt=O00463 | ||
|association_with_transcript=11bp_to_ENST00000261464_5end | |association_with_transcript=11bp_to_ENST00000261464_5end | ||
|cluster_id=chr1:211500190..211500204,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_2_at_TRAF5_5end | |description=CAGE_peak_2_at_TRAF5_5end | ||
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|ontology_enrichment_celltype=CL:0000542!1.54e-16!53;CL:0000051!1.54e-16!53;CL:0000838!2.73e-16!52;CL:0000945!1.19e-10!24;CL:0000826!1.19e-10!24;CL:0000236!3.91e-09!14;CL:0000791!3.68e-07!18;CL:0000789!3.68e-07!18;CL:0002420!3.68e-07!18;CL:0002419!3.68e-07!18;CL:0000790!3.68e-07!18 | |ontology_enrichment_celltype=CL:0000542!1.54e-16!53;CL:0000051!1.54e-16!53;CL:0000838!2.73e-16!52;CL:0000945!1.19e-10!24;CL:0000826!1.19e-10!24;CL:0000236!3.91e-09!14;CL:0000791!3.68e-07!18;CL:0000789!3.68e-07!18;CL:0002420!3.68e-07!18;CL:0002419!3.68e-07!18;CL:0000790!3.68e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.00e-13;24!CL:0000542;1.23e-12;53!CL:0000236;2.87e-12;13!CL:0000791;5.77e-08;18!CL:0000789;5.77e-08;18!CL:0002419;5.77e-08;18!CL:0000084;4.35e-07;25 | |ontology_enrichment_celltype_v019=CL:0000945;4.00e-13;24!CL:0000542;1.23e-12;53!CL:0000236;2.87e-12;13!CL:0000791;5.77e-08;18!CL:0000789;5.77e-08;18!CL:0002419;5.77e-08;18!CL:0000084;4.35e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.72e-20,53;CL:0000051,1.72e-20,53;CL:0000838,4.20e-20,52;CL:0000945,8.84e-13,24;CL:0000826,8.84e-13,24;CL:0000236,3.10e-12,14;CL:0000791,3.39e-08,18;CL:0000789,3.39e-08,18;CL:0002420,3.39e-08,18;CL:0002419,3.39e-08,18;CL:0000790,3.39e-08,18;CL:0000738,1.25e-07,136;CL:0000084,2.74e-07,25;CL:0000827,2.74e-07,25;CL:0002031,2.79e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.23e-12;53!CL:0000790;5.77e-08;18 | |ontology_enrichment_development_v019=CL:0000051;1.23e-12;53!CL:0000790;5.77e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@TRAF5 | |short_description=p2@TRAF5 | ||
}} | }} |
Latest revision as of 22:48, 24 September 2015
Short description: | p2@TRAF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAF5_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 11bp_to_ENST00000261464_5end |
EntrezGene: | TRAF5 |
HGNC: | 12035 |
UniProt: | O00463 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.72e-20 | 53 |
common lymphoid progenitor | 1.72e-20 | 53 |
lymphoid lineage restricted progenitor cell | 4.20e-20 | 52 |
lymphocyte of B lineage | 8.84e-13 | 24 |
pro-B cell | 8.84e-13 | 24 |
B cell | 3.10e-12 | 14 |
mature alpha-beta T cell | 3.39e-08 | 18 |
alpha-beta T cell | 3.39e-08 | 18 |
immature T cell | 3.39e-08 | 18 |
mature T cell | 3.39e-08 | 18 |
immature alpha-beta T cell | 3.39e-08 | 18 |
leukocyte | 1.25e-07 | 136 |
T cell | 2.74e-07 | 25 |
pro-T cell | 2.74e-07 | 25 |
hematopoietic lineage restricted progenitor cell | 2.79e-07 | 120 |