FFCP PHASE1:Hg19::chr20:25038804..25038816,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:25038804..25038816,- to FFCP PHASE1:Hg19::chr20:25038804..25038816,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84532 | |EntrezGene=84532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16091 | |HGNC=16091 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NUB1 | |UniProt=Q9NUB1 | ||
|association_with_transcript=1bp_to_ENST00000323482,NM_001252675,NM_001252677,NM_032501_5end | |||
|cluster_id=chr20:25038804..25038816,- | |||
|description=CAGE_peak_2_at_ACSS1_5end | |||
|id=chr20:25038804..25038816,- | |||
|ontology_enrichment_celltype=CL:0000542!1.86e-11!53;CL:0000051!1.86e-11!53;CL:0000838!3.35e-11!52;CL:0000988!1.90e-09!182;CL:0000037!2.83e-09!172;CL:0000566!2.83e-09!172;CL:0002032!7.28e-08!165;CL:0000837!7.28e-08!165;CL:0002031!5.59e-07!124;CL:0002087!5.73e-07!119;CL:0000738!8.38e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.44e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.51e-11,53;CL:0000051,1.51e-11,53;CL:0000838,3.13e-11,52;CL:0000037,7.64e-11,168;CL:0000988,1.64e-10,177;CL:0002032,2.53e-09,161;CL:0000837,2.53e-09,161;CL:0002087,1.90e-07,115;CL:0002031,2.21e-07,120;CL:0000738,5.35e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;6.44e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.04e-28!115;UBERON:0001049!7.21e-10!57;UBERON:0005068!7.21e-10!57;UBERON:0006241!7.21e-10!57;UBERON:0007135!7.21e-10!57;UBERON:0002616!1.85e-08!59;UBERON:0000955!4.67e-07!69;UBERON:0006238!4.67e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.53e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.64e-32,114;UBERON:0001049,2.10e-09,56;UBERON:0005068,2.10e-09,56;UBERON:0006241,2.10e-09,56;UBERON:0007135,2.10e-09,56;UBERON:0000073,3.12e-08,53;UBERON:0002616,3.12e-08,53;UBERON:0001893,8.63e-07,34;UBERON:0003528,8.66e-07,34;UBERON:0002020,8.66e-07,34 | |||
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|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,0,2.23480547213644,0.872338524100369,0,0,0.783556884599516,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.861847406537515,0.408001382488506,2.19418305034661,0.286235987131057,0.273748850145768,0.502170558379211,1.83392173795083,2.21671591514854,2.67616656466509,2.36018566109342,0.383829398097213,1.08371286321253,0,0.30120591877825,0,0.852139206383318,0.426507697462265,5.5784083473621,3.32397245119126,1.60435557976113,1.30206522429511,2.91090116511902,5.83008598834163,5.6666624879521,0.581592955118259,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.709446689665756,1.03423704220986,1.93645405075148,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,2.26954089876456,0,0.75374599577023,1.0429658368404,0.217188844705117,0,0,0,1.26753171787165,1.06302149982522,1.88692780957538,2.47122988522289,1.65194582125657,2.25015821375912,2.28010194992999,0.79566670879636,2.00930569141097,3.51992488922645,2.73069305631066,3.55803701545422,2.13365111283254,2.40237592221607,4.59801951963587,5.94940385506376,0.954053754535364,1.70763890732835,0,1.91136614062614,3.96513985737078,2.24203425192614,6.847986204152,0.983548850569165,1.57204305099666,0.411202997999018,2.00623794468814,2.28145586643513,2.8406868344084,1.94826728407911,1.55974639639243,2.65145316727353,2.21533894583621,1.62482318259009,1.5370958367081,2.08094956095805,1.97325485524411,4.69795030235942,1.15921234294021,2.22429844743091,0.535081656179426,2.09071047609954,1.69964014046349,3.44898444241729,0.34362744548263,0.253019692019503,2.54852331459277,2.60433381542567,3.8018081777935,1.35517607169996,1.53583933385302,0,2.13099526839615,3.28451198768419,1.61285394579786,0.267440195783507,0.868946423296794,4.87613732627923,0.670700859703636,0.383587685530591,0,0.50133791063589,0,0,0.486634870302636,0.378139268656271,0,0,2.0956652079634,0,1.11235332835329,0.649094787309367,0.174129737299267,0.664789802594326,1.66943437013739,2.28797964312051,2.22874500797739,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0,0.550236083880135,0.417989933073621,2.32575083252396,0.35576626268671,0,1.61131726843659,2.28081631715554,1.95249646038536,0,1.62028389576352,0.892997282840798,1.12264686313085,0.450445921933289,0,0,0.549605231791222,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,1.12135520028461,0,0.49333509683432,1.55605517699883,1.0776853765575,0.326923806226917,0.605429710579726,1.15235184896,0.937285727335186,0.312160076830321,1.1409436430889,0.298897361103602,0.822041490506354,0.971237666208789,1.82586048712923,0,0,0.619954687054593,0,0.494533858557114,1.82032272387605,0.718618141816238,0.841680569770331,0.875829639103749,0.554128230968366,0,0.612975591598039,0.901428353439581,0.453728732640084,0.358779271377724,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,1.28820270022815,0.558350568994769,0.506328996723799,0.292311015483596,0,0.644349290496095,0.484938170456436,0.355009592516614,0,0.67824236924195,0.386521706326594,0.272746120590835,0.573609190778008,0.121973706129595,0.265059536642971,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,2.8810180793198,5.88034845542168,0,0.982827216677626,0,3.5317047953172,0.122988438543114,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0.651616610620649,0,0,0.231860809950154,0,0.866198686566443,0.462985512576611,0.761016608938393,0.790204397959275,0,2.95460407304877,1.63802985597466,2.22946743433092,0,0,0.141775097242386,0,0,0,0,0.792435906119034,1.24396869324463,1.44119953416961,2.14612136824846,1.20645999155121,2.29193055334967,1.17217447210047,0,1.7480673759565,1.20137223137567,1.42913216315289,0.224262168690721,0,0.07333828582095,0.258543431515556,14.3062578340753,1.690605505112,0.26593811658487,1.04007436911366,0.771622122786426,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0,0,0,4.86495122564762,1.50677127429638,0,0.239624855491583,0,0,0,0.205476322550383,0,1.90544744788996,3.54655368363469,1.07813787429759,2.56686072559497,0.508189248444927,0,0,0.335032530668698,0.637938751653163,1.49801404789436,0,0.414415513436035,0.12269149171914,0,0.813795071099207,0.623912584592421,0.178428988797162,0.788512075169673,1.05427273493442,0.300946099727719,0,1.03473071292505,0,0.737476674166813,0.868836144680828,1.37060810223918,1.02943027143257,1.86091223510599,0.862856803274467,1.17400313583789,0,0,0.907170879989041,0.248107807818777,1.2276957863045,0,0.128139149255701,1.02341449813341,0,0,0,0,0.410635780069046,0,0.232420756919918,0.120859449591622,0.200506470303285,0,0.459257792658427,0.182091168006717,0.786746489756545,0,0.15403067420883,0,0,0,1.13733384070897,0.850468526382578,1.0795795805107,4.62681758070868,0.541892875087706,2.508448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| ||
|short_description=p2@ACSS1 | |||
}} | }} |
Latest revision as of 22:29, 24 September 2015
Short description: | p2@ACSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACSS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000323482, NM_001252675, NM_001252677, NM_032501_5end |
EntrezGene: | ACSS1 |
HGNC: | 16091 |
UniProt: | Q9NUB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.51e-11 | 53 |
common lymphoid progenitor | 1.51e-11 | 53 |
lymphoid lineage restricted progenitor cell | 3.13e-11 | 52 |
hematopoietic stem cell | 7.64e-11 | 168 |
hematopoietic cell | 1.64e-10 | 177 |
hematopoietic oligopotent progenitor cell | 2.53e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-09 | 161 |
nongranular leukocyte | 1.90e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.21e-07 | 120 |
leukocyte | 5.35e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.64e-32 | 114 |
neural tube | 2.10e-09 | 56 |
neural rod | 2.10e-09 | 56 |
future spinal cord | 2.10e-09 | 56 |
neural keel | 2.10e-09 | 56 |
regional part of nervous system | 3.12e-08 | 53 |
regional part of brain | 3.12e-08 | 53 |
telencephalon | 8.63e-07 | 34 |
brain grey matter | 8.66e-07 | 34 |
gray matter | 8.66e-07 | 34 |