FFCP PHASE1:Hg19::chr2:220492830..220492865,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6508 | |EntrezGene=6508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11029 | |HGNC=11029 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-372bp_to_ENST00000497589_5end | |association_with_transcript=-372bp_to_ENST00000497589_5end | ||
|cluster_id=chr2:220492830..220492865,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_16_at_SLC4A3_5end | |description=CAGE_peak_16_at_SLC4A3_5end | ||
|id=chr2:220492830..220492865,+ | |id=chr2:220492830..220492865,+ | ||
|ontology_enrichment_celltype=CL:0002621!5.18e-07!3 | |ontology_enrichment_celltype=CL:0002621!5.18e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.23e-66;1!UBERON:0010227;3.34e-66;1!UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease=DOID:114!3.20e-10!2 | |ontology_enrichment_disease=DOID:114!3.20e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:114;5.96e-34;2!DOID:1287;9.45e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.05e-34,2;DOID:1287,1.03e-17,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002079;3.34e-66;1!UBERON:0002081;5.96e-34;2!UBERON:0007100;1.10e-24;25!UBERON:0004151;3.66e-23;3!UBERON:0000948;3.89e-13;22!UBERON:0003103;1.68e-09;61!UBERON:0001009;4.24e-08;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.39e-66,1;UBERON:0002081,5.04e-34,2;UBERON:0010227,5.04e-34,2;UBERON:0004151,3.27e-23,3;UBERON:0007100,5.98e-23,27;UBERON:0000948,3.75e-12,24;UBERON:0005498,3.75e-12,24;UBERON:0004140,3.75e-12,24;UBERON:0009881,3.75e-12,24;UBERON:0004141,3.75e-12,24;UBERON:0003084,3.75e-12,24;UBERON:0007005,3.75e-12,24;UBERON:0004139,3.75e-12,24;UBERON:0004291,3.75e-12,24;UBERON:0003103,8.58e-10,68 | |||
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| ||
|short_description=p16@SLC4A3 | |short_description=p16@SLC4A3 | ||
}} | }} |
Latest revision as of 22:28, 24 September 2015
Short description: | p16@SLC4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SLC4A3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -372bp_to_ENST00000497589_5end |
EntrezGene: | SLC4A3 |
HGNC: | 11029 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.39e-66 | 1 |
cardiac atrium | 5.04e-34 | 2 |
future cardiac atrium | 5.04e-34 | 2 |
cardiac chamber | 3.27e-23 | 3 |
primary circulatory organ | 5.98e-23 | 27 |
heart | 3.75e-12 | 24 |
primitive heart tube | 3.75e-12 | 24 |
primary heart field | 3.75e-12 | 24 |
anterior lateral plate mesoderm | 3.75e-12 | 24 |
heart tube | 3.75e-12 | 24 |
heart primordium | 3.75e-12 | 24 |
cardiac mesoderm | 3.75e-12 | 24 |
cardiogenic plate | 3.75e-12 | 24 |
heart rudiment | 3.75e-12 | 24 |
compound organ | 8.58e-10 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.05e-34 | 2 |
cardiovascular system disease | 1.03e-17 | 4 |